Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0384100.2

Overview

Field Value
Gene ID LotjaGi4g1v0384100
Transcript ID LotjaGi4g1v0384100.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Aldo/keto reductase; TAIR: AT1G04420.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|P0A9T4|TAS_ECOLI Protein tas; TrEMBL-Plants: tr|A0A1J7IYN0|A0A1J7IYN0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76262846..76268041) extracted from Lotus japonicus Gifu genome v1.2.

ATGACACGAACCCAATCCACAGCATCGCACACTTGTTTCTCTCAGTTCTCGACATCGTTCTTTCGTCGTAATGGTCATTT CATATTTGTGTAACACTAGTTTCAACCAATGTCTGTTTCATTTCAATTTTGACAGCTGAAACTGCATTTGTCATGCTATG TATGTAGTTGAAGCTGATGTCTGTTCCTGTGTCCAACCTTGGTCCTAATCTCACCGTTTCAAAGCTCTGCTTAGGAACCA TGACTTTTGGGGAGCAGAACACGTTCCCCCAATCACTTCGCCTTCTAGATCAAGCCTTTCATGCTGGCATCAACTTCTTT GACTCTGCTGAAATGTACTATTTCTCAATTCTTCTTCATCTTCTTCTTGCATTGTGACTTTGATTTTTGTATGAACATGT TGTATTTATTTGCATTGACACTTCAGGTATCCGGTGCCTCAGCGTGCTGAGACTCAGGGGAGGTGTGAGGAGTATCTTGG CCGTTGGATCAGACAAAGGAAAATTCCCAGGGATCGTCTTGTGATTGCAACTAAGGTTTTCTATCTATTACTGTCTTCAA CCTGTTTGTTTAAATGTCTGAATGGAAAATGAAGCTGTTCAAACTTCAAACATGTAATGGGCACAAGAAAAATTGCACCA TTTCTCTATTGCACTCTATTTTTAAGTTTTAGAAGCTTATCGGAACTTCTCAACTGATTGATGTGTGTGACTGTTCACGA GTAGCATGTTAGAAATATAATATGAAACCATTCATGTGGCTCTCACCCAACAACTTAAGCTTTTGGGATAATTGATGTGG CTCTTTCTTCGGGGGGACAAATATACTTGGTGAAGAAATTCTGTGTGGTGTGACCTCCATTCAGGAATAATTGTTAATAT TCCACTTGAGTATTTTCCGATGTATCAAAAAAAAAAAATATTCCACTTGAGATTTACATGGATGCCAGTATTATCATCTA GCATATTGCTTCTCTTTTATTTTTTATTTTCAAGTAACCATTTTTTTTAGAAAGCTCAATTAATATATATTAATAAAGAA GAAAGCTTGAGATACAGCGCCGGACAAATAAACACCGCAAAAGAGGAAAAAGCCCCAAACGCCCACACAAACGAACCCAA AAAAGAACCACAGGAAAAACCAAGAACACCCCATGAATGTTAGGTAGCGTTTGGAAAGAGAACGGAACAGAACAGAACGG TATGGAACAGGACAAGAATGTTCTGTATGCTGTGTTTGGCAGACACATCACAAATAGAACAGAACATAAAATTAATTATA AGTATACCCCTATCATGTTTTAAAACATAAAAAAATTGATTGAGTTGTTTATCAAATGTGAAACGGCTGGAAACTTGCAC CAGCAATCTTCATCTTATTATACATGTTTGCTAATTATTCCGTTACCTTTTCTTCTTCATTAATATTAATATATACATCA AAATAACATTACAATTTGCAGTAGCGAGATTCAATTAAAATAGAATTGCAAGATTCAATTAAAATAGCATTTTCTTTGAT ACCTAAAATAGCATTGCAGTAGTGAGATTGCCCCTTTTCTCTCGTGATTAGCAGATCTCATGTGCGCAGTATATGTTTGA CAGAAATAAAGATGGAGGAAATGGGGGAGGTGCGTGGTGTATGATCATGGAAAGAGAATTGAAATGGGTGACGGCTGTAC AGATGAAATGAGCGTTGAGTGAAAAACAATTGGAAATAATAGAACAAATTTATGGGCAATTTGGTATTTTAATTTAGTGT CCTGTTCTGTTCTCTTCCGTTCCACCCTTTTTCAGGGAACCAAAGTGTCCCGTTCCTGAAGCATTATGTCCTGTTCCGTT CCCTCTTAAAACATGACAAACACGGAACTGAACAAATATGTCCCGTTCCGTTCCGTTCTCACATGTCTACCAAACGCTAC CTTAATTTTCAAGTAACCATTGTTAATTTTTAATTGCTTGAATGTTGCATTTTCCTATGAATTATTCTGTTTTACTGAAA TTCTTCTTGTAACATTGATTTTTATCACAAGACTACTATTGGACTTTGTATAGGTTGCTGGACCATCTGGGCAGATGACT TGGATAAGAGGTGGTCCGACATGTTTGGATGCTAGCAACATTATGGAAGCTATTGATAACAGGTTAGTTGCTTTCTTGAA TCTTCCTGAATTAACACTAATTCACATTCTCATTCTTATGATAATTTGGTCTATCTTCTAGTGGAATTACATAACTGGGT AGTATGCAGAGTAAAGTTGATAACATTTGCAGTGCCAACAATATTGACTACCTCCCAGTTTATCAGATCAAGAGCTGATT GTGATGGACAAGTTATCCTCATAGTAACTGTCTTCATATTAAAAAAAAGGAACCAAAAACAGATAACAGTACTTCGCACA GCAAGTCTGTTTTACAAATCCACCCTGAAAAAATTAAAACCATAGTAATGGAGTCTTAGATTGCGATGGTTCATGATATA CACTCAGTCACACAGACATTCAAGGTAGGGGTAGGGTTCTGGTGGAGAATTCCAGCTTAGAAGAGATATAATATAATATT AATTTTGCATCATATGATTCTTTGTCTGGTATTAATTATTATATTATAATAGCACTGTTATTGAATTTATGCAGTTTGTT GCGGATGCAAATGGATTATATTGATCTTTATCAAATTCATTGGCCTGATCGGTTTGTATGTTTTTGTTAGCTTCAATTCT CAGTTGTTGAATGTTACATTTTGGCCAGCTTTTTTATTTTTGCCCATATGAACATACATATATAGATGACATATATATAA GAATTAGATCCTGAAGTGCTAACAAATCCTTGTAGCTATGTTCCAATGTTTGGAGAAACTGATTATGACCCAGTTCGGCA ATATCCCTCAATTAGTATAGATGAACAACTTGAAGCTCTCAGCAGAGCTGTGGAAGCTGGTAAGGTAAGTGGTCTTGTCA AATTGCTTCAACTGTCAACTTATCAATATTTTAATTCCTGAATCCTGAGTTTGAAAATGAGTGCATTTTTTGGCTTTGGC AGATCAGGTACATTGGTCTTAGCAATGAAACACCATATGGCGTGATGAAGTTTATTCAGGCCGCAGAAAAATTTGCTTCC TACCCAAAGATAGTATCTTTACAGGTTTATCACTCACTACCATTCAACTTCTGCTGTGTTTTTTATTTCCATCGTGGAAC CCTTACCCTTGACCCTACAATTCTTTTTTGGAAGTTTGCTTTGGGCACTAATTTTCTTTTGTTTAGTGACAGAATTCGTA TAGCCTGCTCTGTAGAACTTTTGATTCTGCAATGGCTGAGTGCTGCCATCAGGAGAGGTATGGTCAAATGGTTTAGAATT TGATCCTTGTTGCCTCGTTTTTCTAGATAAAAGTTACATTTCCGCATAAAGTAGGGTAGACCAGTGCATTATAGATGCTT CAAGCCCAAACAACTCATACATGAACAAAAATCATTTACGTGCTTTCAACCTAACAGTTTAAACTTTTGGGGTTGTTTGA TTCATAACAATGATTAAAATATAAAGTTATAGTAATTGATTTTAGGCTTCATAAAAAACACCTTTCTCATGTTAAGAGAA GTTATGAACTGTTGGGGGTTATTGGAGACATAGTTGAAAGGGCATATTAGATCAAGCATTAGCAATCAGATTTATATTAT TTATATCATATTTAATAGACAGAGTGGTAAAACTCCATTTTCTTCAAATGCATGGAACAATTAAAGCCTAGCACATGAAA ATATCCGTGACTTTTACTACATTTGTAATATAATCAGTGAAACTAAAAACTTTCCTGCATTTTCGGCAAAGCTTCATTCT TGGATAATTGATTTCTCTTTTCAGTATTAGCCTGTTGGCCTATAGTCCCCTCGCAATGGGTTTACTTTCAGGGAAATACT TTTCCCCTAGTGGAGGTCCGGAAGATGCTCGGTTCAATCTCTTTAAAGGTAAATTAACATATTGAGATATGTTTTATTTT TATCAAGTATTTTCACCCCCAACACTCCTTCTCAAATCCTAACATGAAAAAAGGAAAGAGAGAAAATGTAAGGCATGTAC CTTGTATGTATGGTTTTACCTAACTGATATTATTGCCGTTGCTTTCACTCACAGGGAAGTATTCAGAAGGAGAGTCCAGA TACAACTTGTCCAACAAAGTTATGCAGGCCGCTGCTAAGGTAAGTGGATTCTCCTCAGTCCTCAACATTGTTGCAACGCT AATATTTTGATTAGCTTATTTTAATGTCACGACTTTGATTAGTGTTTTGAAATTTGGCTTGATTTAAAGCATATTATGTA ATTTGAATTAGGAAAATTGTGTGCTTTAACTGATAGCCTTAGAACTTGAACATGTGTTATAATGGGGTAGCATTCTCTGT CATGTGAAATTTGAGTGAGAAATTGTGTGCATTCTTGTCACCAACGACTGTTTATATGTCATGCTTTTTGGGTCTGAGCA TGAATATCTTGACTTCCATTTTTTTCTGTCTTCTAATATCTTTCCCATTTTGCAGGAATACCTTAATCTTGCAAAAACAT ATGGTCTTCATCCTGTCTCTCTTGCTATAGGTCAACTAATTTGTTCCTGGTTATTTATATTTTGCTGGTCAACTGTTAAT TTCTTCCTAGTTGTTCTTATTTTTTCCCTTTTTCTTTTGGAGCAGCCTTTGTTTTGCGAAATCCCCTTGTTGCTAGTGCT GTTTTTGGGGCTACCAAATCATGGCAGCTCCAGGAGGTTCTAAATGCATGCAAGATCAATCTCACATCTGAAGTGATTGA AGAAATTGACAAGATTCATTCAAGGTTTCCAAATCCTTGTCCCTGATGAATGCAAATAGCTTCAATGATCCACGTCTGTA AGAGAAAGAGACTATTTTCTACCCGGATATTCCCCGTTTGAGAAACTGTAGCTTGCTCTCAACAAGTTTGTCCCAACAAA TGATTTTTCTAACGATGAGTTATATGTGGGGTCTAATTTACTTACAACTAGATTATGCTCTCCTTTCCCTTTGAGATCTC AGTAGTTGATTTTAAGTCTAATTATCTGAAAAAAATCTTTTTGTCCCATCTCCACCTTTAAAGTCCTAACCCATGGTCCG AGTTCTGAATTCTTTTGAACAATTAAATATAAAATTGATGACTCATATTTCAAATGGAGAGAGATCGGAGATGATC 

CDS sequence (LotjaGi4g1v0384100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGAAGCTGATGTCTGTTCCTGTGTCCAACCTTGGTCCTAATCTCACCGTTTCAAAGCTCTGCTTAGGAACCATGAC TTTTGGGGAGCAGAACACGTTCCCCCAATCACTTCGCCTTCTAGATCAAGCCTTTCATGCTGGCATCAACTTCTTTGACT CTGCTGAAATGTATCCGGTGCCTCAGCGTGCTGAGACTCAGGGGAGGTGTGAGGAGTATCTTGGCCGTTGGATCAGACAA AGGAAAATTCCCAGGGATCGTCTTGTGATTGCAACTAAGGTTGCTGGACCATCTGGGCAGATGACTTGGATAAGAGGTGG TCCGACATGTTTGGATGCTAGCAACATTATGGAAGCTATTGATAACAGTTTGTTGCGGATGCAAATGGATTATATTGATC TTTATCAAATTCATTGGCCTGATCGCTATGTTCCAATGTTTGGAGAAACTGATTATGACCCAGTTCGGCAATATCCCTCA ATTAGTATAGATGAACAACTTGAAGCTCTCAGCAGAGCTGTGGAAGCTGGTAAGATCAGGTACATTGGTCTTAGCAATGA AACACCATATGGCGTGATGAAGTTTATTCAGGCCGCAGAAAAATTTGCTTCCTACCCAAAGATAGTATCTTTACAGAATT CGTATAGCCTGCTCTGTAGAACTTTTGATTCTGCAATGGCTGAGTGCTGCCATCAGGAGAGTATTAGCCTGTTGGCCTAT AGTCCCCTCGCAATGGGTTTACTTTCAGGGAAATACTTTTCCCCTAGTGGAGGTCCGGAAGATGCTCGGTTCAATCTCTT TAAAGGGAAGTATTCAGAAGGAGAGTCCAGATACAACTTGTCCAACAAAGTTATGCAGGCCGCTGCTAAGGAATACCTTA ATCTTGCAAAAACATATGGTCTTCATCCTGTCTCTCTTGCTATAGCCTTTGTTTTGCGAAATCCCCTTGTTGCTAGTGCT GTTTTTGGGGCTACCAAATCATGGCAGCTCCAGGAGGTTCTAAATGCATGCAAGATCAATCTCACATCTGAAGTGATTGA AGAAATTGACAAGATTCATTCAAGGTTTCCAAATCCTTGTCCCTGA 

Protein sequence (LotjaGi4g1v0384100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLKLMSVPVSNLGPNLTVSKLCLGTMTFGEQNTFPQSLRLLDQAFHAGINFFDSAEMYPVPQRAETQGRCEEYLGRWIRQ RKIPRDRLVIATKVAGPSGQMTWIRGGPTCLDASNIMEAIDNSLLRMQMDYIDLYQIHWPDRYVPMFGETDYDPVRQYPS ISIDEQLEALSRAVEAGKIRYIGLSNETPYGVMKFIQAAEKFASYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAY SPLAMGLLSGKYFSPSGGPEDARFNLFKGKYSEGESRYNLSNKVMQAAAKEYLNLAKTYGLHPVSLAIAFVLRNPLVASA VFGATKSWQLQEVLNACKINLTSEVIEEIDKIHSRFPNPCP 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 5 361 357 4.5E-204
PANTHER 5 361 357 4.5E-204
CDD 12 352 341 6.27348E-92
Gene3D 12 361 350 2.5E-111
SUPERFAMILY 13 361 349 1.31E-92
Pfam 20 352 333 4.5E-75

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0384100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…