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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0393000 |
| Transcript ID | LotjaGi4g1v0393000.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase; TAIR: AT3G26430.1 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q9LIN2|GDL53_ARATH GDSL esterase/lipase At3g26430; TrEMBL-Plants: tr|I1KSX3|I1KSX3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0393000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77131585..77134096) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATGTGGATAGTATTGATTGATAAAGAACATAGATTACATAACGGTAAACACCGTGACTAGTGCTGCAACGTGTTG TTTAAATTGAATGCAAAGTCTCTTTTTCTACATCAAATGAGATATTTATGGAGGCGTTGACAGAGAAACAGAGACAAATG GTGTCGTGGGTTGCAATTTCAACAACACTAGCTCTATTACTAGTGCCTTGTCCTGTCTCCTGTGAAAGGCAGTGCAATTT TCCGGCAATATTCAACTTCGGAGACTCCAATTCCGACACTGGTGCTATCTCAGCAGCTTTTGAACAAGCTCCTCCCCCTA ATGGAATCACTTTTTTCCACAACCCTGCTGGGCGCTTCTCCGATGGTCGTCTTGTCATCGATTTCATAGGTAAACCATCA CTCTAGTAGCCAATTTTCAGCTTCTGATGCATCAGTGATTGGTAGGCATACACTGTTTGATTCCAAGTGATCAAAATTTG ATTTCAACAGCTAAAAGCTTTGGATTACCTTATCTGAGCGCTTACTTGGATTCTGTTGGCTCAAACTTCAGCACTGGAGC TAACTTTGCAACCGCCGGATCCACCGTCAGACCTCAGAACACAACCAGGTCTCAGAGTGGTTATAGTCCCATATCGCTGG ATGTTCAGTTTGAACAGTTCTCTGGTTTCAAATCAAGATCCAAACTCGTTCGCAAACAAGGTGGTACACTCATATCCTAT ATCCTATATATCATATACATATTCTGATATACATCTGCTAATTGCAAAGGGGTTGGCTAGTTTAATGACAATTTGGCTTA TTAAAATAGAACTTATTATGGGAGGGGCTAAGTTTAGTGTTATTTCAGACATAGAACTTCAAAACACCTCTGATCTTTGC ACAGTGGTAATGTGGGCTGAACGCTCTAGTGGCGATAGTAATGTCCACAACAGAGTTTAGTTTGGCGGAATAAGGTGATG ATGTACTTGTAAAAGACAAAATGAGTAATGCCTATGTAAGTGAACAATTAAACTTATATTTATAGGCATAGTATGACCTG TAACTTAATCATTGAGCTTTAATGAATCTCTTAGATAAGACTTCTGAGTAGTCTTGTAATTGTTTTGTGATTTTGCCGGC TTTATTCCACTCAAGTAACTATTGGACGAGATAAATATTCACTTTAGTCGTCTTAGCCGGCCAGCATGATATTCATATGT ATAGTTGTGAAACCTTCATGTCATTTCAAGACAATATTGGGCTTTGTGACCATTTAAGCCGACCAGAACACTAAATAATT TGTAATGTTTATTTGCTATATGTGGGGTGTTCAAGAATTTGTTGCCCAAGGAGGAGTATTTTTCTGAGGCACTATACACG TTTGATATTGGCCAAAACGATCTCACTGCTGGGTTGAAACTGAACTTAACCACAGAACAAGTCAAGGCATATATACCTGA TGTATTAGGCCAATTCTCCAATGTCATAAAGGTGTGACTAATTGATCATTTTTTTTTGGACAAAACTAATTGATCATCTA AACTTGATTTTTGATTAACTTCTATGGTGTATAGCATAACCATAGTGTTGTCATGTTGCAGAATGTGTATGGGGAAGGAG GAAGGTCATTTTGGATACACAACACAGGCCCACTGGGTTGCCTGCCATACACGCTAGACCGCTATCCCGTGAGTGCGGCC CAAATCGATGAGTTTGGGTGTGCCAAACCCTTCAATGAGATGGCCCAATATTTTAACAGTAAACTGAAAAAAACTGTTGA GCAACTGAGGATAGAACTTCCAAAGGCTGCAATAGTGTACGTTGATGTGTACACAGCGAAGTACACCCTCATCACCCATG CCCAAAAATACGGTAAGCAATAAAATGCACAGAATTTCATTTTATCTCTTTGATTATTGTCTCAAAAATATTCATGAGCA TACAAAATACCATCACATTTTTCCAACATAACATTTAACAAGGTAAACTATAATGTCGGTTAAAATCCCCGGTTAAATAG TGTGTTGGAAGGATGTCGCGGTATTTAATATGTTAGTCTATAACATGAAAATGTGACGAGAAATATAATGTTTTGGATTG GATAGGTTTTGACAAGGGGGTGATAGCATGTTGTGGGCATGGTGGGAAGTACAACTTTAACAATGGAGCGAGATGTGGAG CGAGCAAAATGGTGAATGGGAAAAAAGTTGTGATAGCCAAATCGTGCAAAGATCCAAGTGTGAGGATTCTTTGGGATGGG ATTCATTACACTGAAGCTGCTAATAACTGGGTCTTTCAACAAATAGCCAATGGATCCTTTTCAGATCCACCTATGTCTTT AACAAGGGTTTGTCATGGCAACGCATCTATCCCCTACCATTAATCTCTTTTTCTTGGACATTATGAGATTTTAATTAGCG TTCGTGAATTTTGAATGTGTGCTTGCAACTCGATCATATAGTTTGATAAATTTTGTTGTCAAAGTTCATTTGTCATTGAC AAAAGCATGAGAGTTTATTCGCTAAACCCCAA
CDS sequence (LotjaGi4g1v0393000.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAGTTTGAACAGTTCTCTGGTTTCAAATCAAGATCCAAACTCGTTCGCAAACAAGAATGTGTATGGGGAAGGAGG AAGGTCATTTTGGATACACAACACAGGCCCACTGGGTTGCCTGCCATACACGCTAGACCGCTATCCCGTGAGTGCGGCCC AAATCGATGAGTTTGGGTGTGCCAAACCCTTCAATGAGATGGCCCAATATTTTAACAGTAAACTGAAAAAAACTGTTGAG CAACTGAGGATAGAACTTCCAAAGGCTGCAATAGTGTACGTTGATGTGTACACAGCGAAGTACACCCTCATCACCCATGC CCAAAAATACGGTTTTGACAAGGGGGTGATAGCATGTTGTGGGCATGGTGGGAAGTACAACTTTAACAATGGAGCGAGAT GTGGAGCGAGCAAAATGGTGAATGGGAAAAAAGTTGTGATAGCCAAATCGTGCAAAGATCCAAGTGTGAGGATTCTTTGG GATGGGATTCATTACACTGAAGCTGCTAATAACTGGGTCTTTCAACAAATAGCCAATGGATCCTTTTCAGATCCACCTAT GTCTTTAACAAGGGTTTGTCATGGCAACGCATCTATCCCCTACCATTAA
Protein sequence (LotjaGi4g1v0393000.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSLNSSLVSNQDPNSFANKNVYGEGGRSFWIHNTGPLGCLPYTLDRYPVSAAQIDEFGCAKPFNEMAQYFNSKLKKTVE QLRIELPKAAIVYVDVYTAKYTLITHAQKYGFDKGVIACCGHGGKYNFNNGARCGASKMVNGKKVVIAKSCKDPSVRILW DGIHYTEAANNWVFQQIANGSFSDPPMSLTRVCHGNASIPYH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 12 | 181 | 170 | 5.3E-14 | ||
| PANTHER | 20 | 192 | 173 | 3.3E-81 | – | |
| PANTHER | 20 | 192 | 173 | 3.3E-81 | – | |
| Pfam | 20 | 177 | 158 | 6.6E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi4g1v0393000.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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