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LotjaGi4g1v0404800.2

Overview

Field Value
Gene ID LotjaGi4g1v0404800
Transcript ID LotjaGi4g1v0404800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Alkaline/neutral invertase; TAIR: AT5G22510.1 alkaline/neutral invertase; Swiss-Prot: sp|Q9FK88|INVE_ARATH Alkaline/neutral invertase E, chloroplastic; TrEMBL-Plants: tr|I1KTC2|I1KTC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0404800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:78145550..78149300) extracted from Lotus japonicus Gifu genome v1.2.

ATGTCACTGGGTACCTCCAAAGCAGTTTTTCAGGTTTTGTCTGGGGTGGTGCCTCAAATTGGGTATAATGAGCCTTTTGT GATCTCTTCCCAGTTTCGAGTAAAATGTGTGAAGAAAAGATCCTCTAGGCATAGGTATTTAATTGAGGGTGCTAGCGTGC TTCAATGTCAGTTGGGAACTCGTCAGCTTCAGTGGATGGGTGTCGGTATCTCTGGATATAAAACGTGTAGTCGTCCGTGC TTGCAGATACGCAACTGCCAACAGGCGGAAAGTGCGAGTGGTATAAGTGCAGGGGATGGAAATGGATCAAGGTTTGTGAA TGATGTTGAAACATCAAATTTGGTAAGCAATGTGATGGGTGCAAGGAGTATGCTAGATGTTCAACCGTTGAAAAAGGAAA GGGAGGGTTTGACATCTAATGTCACAAATGGAACTATCCCTGATGCCTTTGACTCAGTTAGCCTCGACTCTATTGAGGAA GAAGCATGGGACCTACTAAGGGAGTCTGTAGTCCATTACTGTGGGAATCCTATAGGAACTATTGCTGCAAAGGACCCAAC AAGTTCCAATGTTTTGAATTATGACCAGGTCTTTATTCGTGATTTCATTCCTTCTGGAATTGCTTTCCTATTGAAAGGAG AGTATGATATTGTTCGGAATTTCATCCTCCATACACTTCAGTTGCAGGTAATGTCTTAGTCTTGTAATCCTGATAAGATG TCCTGCCAATAGAGGCTGTTAAATTTTAAGCTACTTCGTGCTTTTAGTTGTCTGATATATGTATTTTCATTTTTTCATTG ATTTTGCTTAAGTAAAACTGTGTTTCTATTGTTCTTGTACAAAGCTAAATTCATTTACGTCACTACAGTTTAAGTCCTGC CAATTTCTCCCCCTGTTTGTATATTTTTTGGTAAAACAGTAGAATACAAAGTTTCCTTTGAGAAACATGCTGAAAATGTT TGTGTGACAGGACAGCTAATAATTTTTGTGAACTGTATACGGCTAGAATGACTTAGGACCCTTTCAATACTTACTTAACA GAAGAGGCATTAAAAAGTACTTTCATTAGTAATCTTTATTTTGTTAGCACTTCTTTTGCTTGGACTGGTTATTGTGTATA ATTAATGAGGAGGCTGAAATGCCCCTTTGAAAAGAAGGGGGGGGGGGGGGGTTCAAATTCTTGTTATAAGGTGGCTTTGT TTTTCTAATACACTAAGTCTTGAACCGACGGATCCATATTTCAGAGCTGGGAGAAAACTATGGATTGTCACAGTCCAGGA CAAGGTTTGATGCCTGCTAGTTTTAAGGTTCGAACAGTTCCTCTGGATGGAGATGACTCTGCAACAGAAGAGGTTTTGGA CCCCGACTTTGGAGAGGCAGCCATTGGTCGTGTTGCTCCAGTTGATTCTGGTAAAACAACCGCTCAAAGCAACATAATTC TTTTATACATAACAGAAGAAACTTACCATATTACTCCTTGTTTGTTGAACTTATTTCACTTGTGATCTCAGGACTCTGGT GGATTATTTTATTACGAGCGTATGGAAAATGCTCTGGTGATCTATCTGTTCAAGAGAGAGTTGATGTGCAAACAGGGATT AAAATGATTTTGAAGTTGTGTCTTGCTGATGGTTTTGACATGTTCCCAACATTATTAGTAACTGATGGTTCTTGCATGAT AGATCGAAGGATGGGAATTCATGGGCATCCTTTGGAGATTCAGGTATGTAAGATTGGTTTAAGAATCAATGTATCCTTCT GATATATTCCTAGTGATTGAACTGAAAAACTGACACACAACACAAGTTCACACTTGTAGAGCGTGGACTTGGCAAAATGT GTTATTTCACCTTTCTGATATTTAATGGACAGAGTGAAGACATCAGAGATGTCTGTCTTCTTATATGTTTGACTAAGTGC TACTTTGGAAAAAATTCTTAACAAGCACTTGTAGAAAAAGAAAGTTGAAATGATCATGCAATGACGACAAGTCTTTGAAG TTATAGTTTCTTGCAAAAGTTGAAATCAACTTTCATATCTCATATTTTGCAGAAGCTCCCTCATATAACTTCTTTATAAG TACCTATTAACTTAAAATAGTTTTTCCTTAGGTTCGAAATCAAATACTTAACTAATTGAAAAGCTCTCATAATTTAGAAG CTAATCCAAACTGGGCCTCTGTCCTTCTCAACTGCTTTGGTTAAGCAATATGAAAATGTTAATAGGTCAGATTTGATGCT TTGCTGCACGTTTTATGTTATCTACACAAAAAACCACTAATTCCAGACGACATATTGAAGTTTATATATTTTGTTCCAAA ATCTTGTTTTTATCTATCTCTCTTGCCAATTCTTATTTTTTCACGAAAAATTGGGTCTACTGAGATGCTTACAATTAACA ATGAAATTAGTGATGAAGTATTGTTCTCTGATGTGTATTCCCTTTTGCTTTTTCTTTTATTTTTATGTTTCTAGGCACTA TTTTATTCTGCCTTACTTTGTGCACGTGAAATGCTAACTCCTGAGGATGGATCGGCTGATCTTATACGAGCCCTGAACAA TCGTCTAATAGCTCTTTCATTTCACATTAGAGAATATTATTGGATTGATTTGAAAAAGTTAAACGAGATCTACCGATACA AGACAGAGGAGTACTCATATGATGCTGTTAATAAGTTCAATATATACCCGGATCAGATTCCTCCTTGGTTAGTGGAATGG ATACCGAACAGAGGAGGCTATTTAATTGGTAACTTGCAACCAGCTCACATGGATTTCCGATTTTTTTCACTGGGAAACTT GTGGTCTGTGGCAAATAGTTTGGCCACAGAGGAACAATCACATGCCATATTGGATCTTATTGAGGCCAAATGGTCAGATT TGGTAACAGAGATGCCATTTAAGATTTGTTATCCTGCTCTTGAAGGTCAGGAGTGGCAGATAATCACCGGCAGCGATCCC AAGAACACGTACCATATCTAAGTTTTCTCAGCTTATGTTTTTCTGTTATCTTAATATATTTCTCATCAAATGACTTCATT TACTTATTTTTTTGCAGTCCTTGGTCCTACCATAATGCAGGCTCCTGGCCAACACTGCTCTGGCAGGTTAGTTACTGTGG CAGTAACTTAAAATATCTAATTTATTTTACAATGAAACTAGTAAGTGATGAAATGATATTGTTTGTGTTTGATGAAGCAG TGCTGATTTATTGCTTCGATCCTTTTTTTTCTGCATGGCTCTTATTATAATACCAGAGATGGAAAGGTGCATAATAAATG GCGCAGTCGTCTCCCTGAAAAGAAAAAAATTCCTTAATAGAATAATATTCAAATGTTGTATTTGTCCCTTTCAATTTTTT TATACTGTTTCGTCCAATTAGCCATTGCCAACTTTTCTTAATATGTTAAATTTTGCTCCCCTTATGCCTATTGCAGCTCA CAGTTGCATGCATAAAGATGAATAGACCACACATTGCGGAAAAAGCTGTTGAAATTGCTGAGAGACGCATATCAAGAGAC AGGTGGCCGGAGTATTATGACACAAAGAGATCTCGAATCATTGGAAAGCAATCTAGATTATTTCAGACTTGGTCAATTGC AGGGTTCCTTGTGGCGAAGCTGCTGCTTGCAGACCCAAGTAAAGCAAGCATCCTGATAACTGAAGAGGATTCTGAACTTG TGAATGCCTTGATAAGTGCCAACCCTAGAGGAAAGCGTGGGCGAAAAAATTTGAAGAGCTACATTGTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0404800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCACTGGGTACCTCCAAAGCAGTTTTTCAGGTTTTGTCTGGGGTGGTGCCTCAAATTGGGTATAATGAGCCTTTTGT GATCTCTTCCCAGTTTCGAGTAAAATGTGTGAAGAAAAGATCCTCTAGGCATAGGTATTTAATTGAGGGTGCTAGCGTGC TTCAATGTCAGTTGGGAACTCGTCAGCTTCAGTGGATGGGTGTCGGTATCTCTGGATATAAAACGTGTAGTCGTCCGTGC TTGCAGATACGCAACTGCCAACAGGCGGAAAGTGCGAGTGGTATAAGTGCAGGGGATGGAAATGGATCAAGGTTTGTGAA TGATGTTGAAACATCAAATTTGGTAAGCAATGTGATGGGTGCAAGGAGTATGCTAGATGTTCAACCGTTGAAAAAGGAAA GGGAGGGTTTGACATCTAATGTCACAAATGGAACTATCCCTGATGCCTTTGACTCAGTTAGCCTCGACTCTATTGAGGAA GAAGCATGGGACCTACTAAGGGAGTCTGTAGTCCATTACTGTGGGAATCCTATAGGAACTATTGCTGCAAAGGACCCAAC AAGTTCCAATGTTTTGAATTATGACCAGGTCTTTATTCGTGATTTCATTCCTTCTGGAATTGCTTTCCTATTGAAAGGAG AGTATGATATTGTTCGGAATTTCATCCTCCATACACTTCAGTTGCAGAGCTGGGAGAAAACTATGGATTGTCACAGTCCA GGACAAGGTTTGATGCCTGCTAGTTTTAAGGTTCGAACAGTTCCTCTGGATGGAGATGACTCTGCAACAGAAGAGGTTTT GGACCCCGACTTTGGAGAGGCAGCCATTGGTCGTGTTGCTCCAGTTGATTCTGGACTCTGGTGGATTATTTTATTACGAG CGTATGGAAAATGCTCTGGTGATCTATCTGTTCAAGAGAGAGTTGATGTGCAAACAGGGATTAAAATGATTTTGAAGTTG TGTCTTGCTGATGGTTTTGACATGTTCCCAACATTATTAGTAACTGATGGTTCTTGCATGATAGATCGAAGGATGGGAAT TCATGGGCATCCTTTGGAGATTCAGGCACTATTTTATTCTGCCTTACTTTGTGCACGTGAAATGCTAACTCCTGAGGATG GATCGGCTGATCTTATACGAGCCCTGAACAATCGTCTAATAGCTCTTTCATTTCACATTAGAGAATATTATTGGATTGAT TTGAAAAAGTTAAACGAGATCTACCGATACAAGACAGAGGAGTACTCATATGATGCTGTTAATAAGTTCAATATATACCC GGATCAGATTCCTCCTTGGTTAGTGGAATGGATACCGAACAGAGGAGGCTATTTAATTGGTAACTTGCAACCAGCTCACA TGGATTTCCGATTTTTTTCACTGGGAAACTTGTGGTCTGTGGCAAATAGTTTGGCCACAGAGGAACAATCACATGCCATA TTGGATCTTATTGAGGCCAAATGGTCAGATTTGGTAACAGAGATGCCATTTAAGATTTGTTATCCTGCTCTTGAAGGTCA GGAGTGGCAGATAATCACCGGCAGCGATCCCAAGAACACTCCTTGGTCCTACCATAATGCAGGCTCCTGGCCAACACTGC TCTGGCAGCTCACAGTTGCATGCATAAAGATGAATAGACCACACATTGCGGAAAAAGCTGTTGAAATTGCTGAGAGACGC ATATCAAGAGACAGGTGGCCGGAGTATTATGACACAAAGAGATCTCGAATCATTGGAAAGCAATCTAGATTATTTCAGAC TTGGTCAATTGCAGGGTTCCTTGTGGCGAAGCTGCTGCTTGCAGACCCAAGTAAAGCAAGCATCCTGATAACTGAAGAGG ATTCTGAACTTGTGAATGCCTTGATAAGTGCCAACCCTAGAGGAAAGCGTGGGCGAAAAAATTTGAAGAGCTACATTGTT TGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0404800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSLGTSKAVFQVLSGVVPQIGYNEPFVISSQFRVKCVKKRSSRHRYLIEGASVLQCQLGTRQLQWMGVGISGYKTCSRPC LQIRNCQQAESASGISAGDGNGSRFVNDVETSNLVSNVMGARSMLDVQPLKKEREGLTSNVTNGTIPDAFDSVSLDSIEE EAWDLLRESVVHYCGNPIGTIAAKDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSP GQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKL CLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLTPEDGSADLIRALNNRLIALSFHIREYYWID LKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWIPNRGGYLIGNLQPAHMDFRFFSLGNLWSVANSLATEEQSHAI LDLIEAKWSDLVTEMPFKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPTLLWQLTVACIKMNRPHIAEKAVEIAERR ISRDRWPEYYDTKRSRIIGKQSRLFQTWSIAGFLVAKLLLADPSKASILITEEDSELVNALISANPRGKRGRKNLKSYIV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31916:SF36
4 638 635 0.0 –
PANTHER
PTHR31916
4 638 635 0.0
IPR024746
SUPERFAMILY
SSF48208
155 605 451 6.32E-48
IPR008928
Pfam
PF12899
162 603 442 5.5E-213
IPR024746
Gene3D
G3DSA:1.50.10.10
189 596 408 7.2E-8
IPR012341

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0033926
Molecular function Glycopeptide alpha-N-acetylgalactosaminidase activity Catalysis of the reaction: D-galactosyl-3-(N-acetyl-alpha-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-alpha-D-galactosamine + L-serine in mucin-type glycoproteins.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0404800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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