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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0405300 |
| Transcript ID | LotjaGi4g1v0405300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TSL-kinase interacting protein 1; TAIR: AT4G39380.1 TSL-kinase interacting-like protein; Swiss-Prot: sp|Q8LJT8|TKI1_ARATH TSL-kinase interacting protein 1; TrEMBL-Plants: tr|I3T608|I3T608_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0405300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78167588..78172424) extracted from Lotus japonicus Gifu genome v1.2.
TTCATTGATTGGTTTCCCTCTATTTACAAACTTTCAACATTCATTCATTCTTCATTCCCGCGCCAACACTTTCACTCTTC TTCTTCCTCGCTCTCTTCTCTCTTCTCCGTTCTGCAAATCCGATCCACTTTCTCTTCCGTCACGGCTTCTCCAAGGTACT CAACTCAATTCCCAATCTCCATCTTCCTTTAACATGGTTCTGTTACTAGTTTTCTCAAAGTATTTGTGTTCTTCTTCGTA ATCGAAATCGCACAACACTCAAATTAGGGTTTCGCCTTGCGTGAATCTGCGATGCTGATTTTAGGATTTCTCATGTTGTT ATCACTGTGATCCATAGCATAATCGGGGCTGTGATGTTGATTTGTTAGATCTGCCTTTATTGAAATTTAGTTCTCTTCTC ACATATTTGGTAATTGTGTGAATCCGGAGTCGAAAAAGGAATTTGAGCATTGTGGCGAAGTATAGGAAAAAGAAATTAGG GTTACGTATTGTGAATTTTCGGTTGCAAGTTTAGAGTTAGTGCAAATTATGAATCTGATGTACTGATTCTTAGCTGAGAA AATTTGTCTGTTCAATTCTTATTGTTGCTGTTGTAGACATTGCGGTGATAGAATCTGAGAACTGTGAGGAAACTTATGCA CTGATTAGATTGTACCTGTCTGGTTTTATGATGTCATGACATAAGGTGCTGAAAGTAAGCATGAATGATTTTTTATTTTA TGAAATTTCTGGTAGTCAATTGTAATTACTCTTTTGTACCGCATATAACATCTTTGTCAAAATTGTTGTATTTGTGCTTT CTTAAGGAGGATAGTAATGAAGATTATTTATTATTATCACCTTTTAGGAAGGTTGGACTATCATGAAAGCAGGTAGGTCA ACTGTGAAGGCTTCTGCAAAGTGCAGTCCAAAGACAGGATCTGTTGGAGTGAAAAATACTTCCAAGGGAACCAATAAGCG GGTTTCCAAAGCAAGAGGTGATCACCAATGTACTGTTTTATTGATTTTAAATGACTCTTTGGTTTCATATATTCCTCTCT CTTGATGTGTTGATTTTTAAGCCTCTATCTAAGAACTAGAATAAGCTTTGTAGGTTCAATTTGCCTGTTAGGAATATTAT TTCCAAAGAAATGAATCTTTTTTATCTTGGATAAGGCAACATGTTAGGATCTACTTATTAGGGTTTTAGTTTTTTTCCCC TTCAGTTTTAGAGTCTATCTTAGGAGATCTTTAGTTTTGGGGTTGGGTTATCTTTTAGATTTAGAGTATCTTTTATATTA TGTGGTTATCTTTTATTTTGGTTCGTATATCTTCTTTATTTCTTTGGGGTTAAGTTTATCTTATTAGGATCTATTTATTA TAAATAGGAGTACCCTCCTTAGGTTAGATTCAGTCTTTGAATTACTGAGTTGTAAGGGAATTTCCCCTTTGGAAAAGGTT AAGCTTCTTGTGTCTTTTATTTTCCAGTTTATATAATTAAAGTTTCAACAAAATTATCCTTTATCATCTTTTGTCTACCA TTTTGCTGTTAGGATTTTACTGATCCTAACACGACCTGAGGTTTAGATCCTAACAGTCTAACACAACACTACTTTTGTAA TTCCGACAAGTATTCACTTGCCATTCTCTCATGGATTTTTCTGAATATAATATCTAAACCTCTTCTCTTCAGGATATGGT GAAGAGTTGTTGACTGACAAAGAGAACCAGAATTTTTCTTTTAAGGAACCTGTGGGAATGTGCGGAGAACTTCACAAAAA AGATAAGTTTATAATGGAAAAGAGGGAGGCGATTGAGCTTGAGCTTCATCCCAACCAAGCACTCAATTCTTGTGCAAAGA TCAAGTTACAACTTTTTCCAATAAATGAAGGAACTCGAATAGGACTTGAAAAGGTTACATGATGATATGTGAAGCATTTG AACATATTAGATATACTTTATATCTATCCTAGTATGCATGCAGTTAGACTTGATGCTTAATCTAATTTTTCTTCAGGATG GGCATAATCCATATTTAGAACTCACACTTAGAGGTCGAAAGAAAATCTCTTCAGTGCTACAACACATTGAGAAGAAGTGG GGAAGTTCAAGTACAAACAAAGGAGAGCCTATGCTTTTCCCATACAACAAAATGGAAAATCTACCTGACTGTAGATGGAC AATTAATGATAGTGACACAACAGCCTCAGCTGTCTATGCTGCTATTGGAAGCCCTGCAATTTTCCGATTGAGGTATAGTA TTCAATCATTTTTATCATCTGTTTCCTTTTCTATATTGAAAGTAGTCAATTTTTAACTTTTTAGTGTTGTAACTTGTTCT ATCCCTTTTAAGGTATGGTTGGTGCTGCACATATGAACCTAGGTCTTTTGGTATACCTTCCTCACCAATTCCTCATAAGC CTGGTGTGAACTATGGAGGAACAGAGGGAGATTGCAATTCTAATATGGAGATTTCACGTCGGGAACATGATAAGGATGAG GCGACCAGTGAGGAATGCAAAGCAATTGATATGGGCAATGCAACAAGTGAAATTGTGACTCAGAAAATGGACAATACATC TGCTGATCCCCTGGTAAACTGTTATTTAGATGTTTGTTGCGTATTAAAATAACTTGCAGATAGTTGCATAATTGAATGAC ACAATTTTATAACAGGAGTCATGGCTATTATTGGTGCCTCTGGTTTTATACAGATGTTAGTCTTAGATGTGTGAGTTAAG GAACATGAAGATGTTTTTTATGAGGGTTTTCTTCATATTGACTTGTAGAATTATGTGGAAAGTTTTAGTTATATGATTTG GAAAGAAGCGTTGGTGCATATGATGTGGAAATTTTCAAGTTCAAAATGCTGTTAGTCATATTTGTGATAGCATGTATAAA ACACTTGAACAATATTCTTGTTTATTGTCCTCTATTATATGTTTGATAAATATATTGTTGGTTGGTTCTGAAGTTTAGAA TGGATTTTGAATTCCAGTCTGTCCTCTGGTGGTTATAATCTATAGCATATGTTCTTATATGAAACTAAATTCCAGTACAT TCCATCCCAAATATTTGTTTTCTAAGATATGCGTGTTTTGTTCTAACTAGGATAATGAGCCAAGAGTATGTAGTAGCCAT GAACAGCCTTTACCACCATGGATGGATAGTCTAACCAATATAAGCATTGGGGGCCTCCTGTCTGAAGCATCATTAATGAG TGGGTTTGATCCAAAATCATTTGGCTCCAATGCTGCGACACAGCCAAGTCAAATAGTTTCTGATTCCTTGGATGCTTTTA TCTTTGCCCGAAGTAGTCGTCCTCCTGTTTCAAGACCACCTGCTGAAGTGTTACGCACATCTATATTGGATGCTGAAGAA ACATGCCATGCATTTCCTCTTCGAAAGTTATCGTCCTCAGCAGATGTGCAGACTGCTAGTGGAAAAGGTTTTTCAGTGGG CTGCAGTCAGGACGTTCCTTCAAACTTATTGAAGTTGTTAAATTCAGACAAGGTCAGTTGTTTCACTTTCAACCAAAAAC TATTATTTAAATTTGAGAGGTTAGTGTTGCTTGTACCTATGATGCAAAAACTACCAAATTCTTCTTGTAAGATGGCTCAC AAGTTATTTACTGGCTTTTTTTAATCATTTCACCTTTTCCTTTTTGAAATAATGAGACTTCTTTTCCGCCTTTTCTCCTT TTTATGATTTGACAATTGCATAGGAACATCAACTTTGCGATCCCCTATGTCATGTCTTTAACTTCGGTTTGTGAAAGATA GAAGTTTTTCCAAAATATTTTGTACAACTGGATATTATTTGTCAGCTTTATGAATACTTTGTGTCAAGGCTCATTTGAAC AGAATATTTGATGTTTTAAATGAGCCTAAGGCTCCACCAAAATTGCATTGCTAATAAAATAACTTCAATGTTGCATTCAG ATAATCAGGCTTCATATTGATGTGTGATCGGGATAAGTTTTCATTTATAGACTAAAAATTGGATAGAAACTTTGATGTCC ATCATTACTCTGCACTTCATTCTCACTTATTGTGTTATTGTGTTATAAAGGTGAATGATCAAGATAGTCGTCCACAAAAT CCCCTAACTGGGAAGACTCAGACAGACTCCTCGCTTTCTTCACGTTTGTATGATGATGAAAGAAGTCTTGGGTTAACAGG CATCAAATGGGTATTTAATTTTCTTATTGAAGCACTTCAGTGTTTTTTTGTGTGTTTATTCCCACAATTTCTGATCTAAC TAATATACCATCTGAATACAGAATGACTCTATGGGACCTTTTGATCTTGGCATGGCGGCCACAAAGCTTAATGGCGGAGA CAGTGCTAGCATCGGTGGATTTGTTAAATAATAAAGATGCACAAGTTTGAGACCAAATGATCCATTTTGAAAATACCTGC TTAGGAAATAGAAGAAACAAATTGTATATAACAGGGACATTTGCTGAAGTTACCGAGTTTCAGGTGTAAAAATCATTTAT AGAGGGGACAAATATTTCTCTTTGTATTATCTTCTCTTTAGCGCATGTTAAGACATACAATAGAATCATGATAGATAGAA GTAACTTACATTAGTTTTTGCTTCTGTCGATCATGATTTTGACTTCAACCTGATTTTTTACTGTGTATCCAAATATGTAC TTTCACCGTAATTTTGGTTCACCGTAGATTTTTACTGTGTATCTAAACGGATAGTTCATGACTTCTTATCAACAAGGTCC TGATTTGGTTGCTTAGCTTTATGTTGTTCTACTTCTACCCTCAAGCGCTGATGAACTGAAATGGTCAAACAGAAAAATCA ATTTATATGAGGGTTGGTAATAATGAGTATGTATATG
CDS sequence (LotjaGi4g1v0405300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGCAGGTAGGTCAACTGTGAAGGCTTCTGCAAAGTGCAGTCCAAAGACAGGATCTGTTGGAGTGAAAAATACTTC CAAGGGAACCAATAAGCGGGTTTCCAAAGCAAGAGGATATGGTGAAGAGTTGTTGACTGACAAAGAGAACCAGAATTTTT CTTTTAAGGAACCTGTGGGAATGTGCGGAGAACTTCACAAAAAAGATAAGTTTATAATGGAAAAGAGGGAGGCGATTGAG CTTGAGCTTCATCCCAACCAAGCACTCAATTCTTGTGCAAAGATCAAGTTACAACTTTTTCCAATAAATGAAGGAACTCG AATAGGACTTGAAAAGGATGGGCATAATCCATATTTAGAACTCACACTTAGAGGTCGAAAGAAAATCTCTTCAGTGCTAC AACACATTGAGAAGAAGTGGGGAAGTTCAAGTACAAACAAAGGAGAGCCTATGCTTTTCCCATACAACAAAATGGAAAAT CTACCTGACTGTAGATGGACAATTAATGATAGTGACACAACAGCCTCAGCTGTCTATGCTGCTATTGGAAGCCCTGCAAT TTTCCGATTGAGGTATGGTTGGTGCTGCACATATGAACCTAGGTCTTTTGGTATACCTTCCTCACCAATTCCTCATAAGC CTGGTGTGAACTATGGAGGAACAGAGGGAGATTGCAATTCTAATATGGAGATTTCACGTCGGGAACATGATAAGGATGAG GCGACCAGTGAGGAATGCAAAGCAATTGATATGGGCAATGCAACAAGTGAAATTGTGACTCAGAAAATGGACAATACATC TGCTGATCCCCTGGATAATGAGCCAAGAGTATGTAGTAGCCATGAACAGCCTTTACCACCATGGATGGATAGTCTAACCA ATATAAGCATTGGGGGCCTCCTGTCTGAAGCATCATTAATGAGTGGGTTTGATCCAAAATCATTTGGCTCCAATGCTGCG ACACAGCCAAGTCAAATAGTTTCTGATTCCTTGGATGCTTTTATCTTTGCCCGAAGTAGTCGTCCTCCTGTTTCAAGACC ACCTGCTGAAGTGTTACGCACATCTATATTGGATGCTGAAGAAACATGCCATGCATTTCCTCTTCGAAAGTTATCGTCCT CAGCAGATGTGCAGACTGCTAGTGGAAAAGGTTTTTCAGTGGGCTGCAGTCAGGACGTTCCTTCAAACTTATTGAAGTTG TTAAATTCAGACAAGGTGAATGATCAAGATAGTCGTCCACAAAATCCCCTAACTGGGAAGACTCAGACAGACTCCTCGCT TTCTTCACGTTTGTATGATGATGAAAGAAGTCTTGGGTTAACAGGCATCAAATGGAATGACTCTATGGGACCTTTTGATC TTGGCATGGCGGCCACAAAGCTTAATGGCGGAGACAGTGCTAGCATCGGTGGATTTGTTAAATAA
Protein sequence (LotjaGi4g1v0405300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKAGRSTVKASAKCSPKTGSVGVKNTSKGTNKRVSKARGYGEELLTDKENQNFSFKEPVGMCGELHKKDKFIMEKREAIE LELHPNQALNSCAKIKLQLFPINEGTRIGLEKDGHNPYLELTLRGRKKISSVLQHIEKKWGSSSTNKGEPMLFPYNKMEN LPDCRWTINDSDTTASAVYAAIGSPAIFRLRYGWCCTYEPRSFGIPSSPIPHKPGVNYGGTEGDCNSNMEISRREHDKDE ATSEECKAIDMGNATSEIVTQKMDNTSADPLDNEPRVCSSHEQPLPPWMDSLTNISIGGLLSEASLMSGFDPKSFGSNAA TQPSQIVSDSLDAFIFARSSRPPVSRPPAEVLRTSILDAEETCHAFPLRKLSSSADVQTASGKGFSVGCSQDVPSNLLKL LNSDKVNDQDSRPQNPLTGKTQTDSSLSSRLYDDERSLGLTGIKWNDSMGPFDLGMAATKLNGGDSASIGGFVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| PANTHER | 6 | 474 | 469 | 5.9E-160 | – | |
| PANTHER | 6 | 474 | 469 | 5.9E-160 | – | |
| MobiDBLite | 11 | 33 | 23 | - | – | |
| MobiDBLite | 404 | 430 | 27 | - | – | |
| MobiDBLite | 404 | 428 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0405300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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