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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0413200 |
| Transcript ID | LotjaGi4g1v0413200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Filament-like plant protein; TAIR: AT3G05270.1 filament-like protein (DUF869); Swiss-Prot: sp|Q9MA92|FPP3_ARATH Filament-like plant protein 3; TrEMBL-Plants: tr|G7LFP4|G7LFP4_MEDTR Filament-like plant protein; Found in the gene: LotjaGi4g1v0413200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78900445..78906616) extracted from Lotus japonicus Gifu genome v1.2.
GTAGAGGACAAGAAGAACAACAGTAACTAATTAAGAAGAACAAATCGAATCAGATTTTATGTAGGGAAACCCCAGGACCA ATAGGCGGGAATAACGCGGACTTCATTTCAAACAAAACAGCCTCCATTGTCAAATGTAATTATCTTCATCATCAGAAAAA AGATGAAGTGAGTAATTACTAATTAAAACCAGCATTACACTTTTTTAATTATTATTTTTTCTCTCCCTTCACATGGTCCT ACGCTATCTCTCTCTGTCACTATTCATTTTGTTTCTATTTTATTTTCTGTTCTGTCACCAGAAAACGTGTCGGATAATAT TTCAGTACAACCTCTGAATCTTCCGATGATGTTCCCCTGAAAAAATTCCCCTGACATTCCTCTCCGATCTCCGGAGCTTG TCGCCGGCACAAGGTAACAAATCCCACTCTTACCCCTGTCACTCTCACCCTGTACTTTTCACTCATTACCCTTTTCTTCA AGCAATCTCGTGAGTGAAACTCAATCTGGGTTCACGTTTTCCAGATACAACTTTCAATTTTTCATTGATTTGCGTCAATT TGGGAAGTCTTTGGTAGGTGGGTATGTGTCATGAGAGTTGTTAGATTTTTCAGTGTGGAGTAAAAGCCATTTCTTCAAGC TTCTATCAAATCCTCTTTCAAAGCTTTCATCTTATTCAATATTTTTTACTTGTGACTTGTGGTAGTGATCCTTTTCAAGC TTCCATTGAAAGCACTACCCTTTTATGGGAAGCTTCAATAAAAGGTAAAAAAATGGAGGTAGATGGGTTTGGATGGATGG GAAGTGAATTCTAAGCAAAGCTCATAACTAACCCACTTTATGTTTTTCATTTAAAATTTGATTCTGGTTTCAGTCTTATA ATAATGTCCCTTCCTTTTTTGTTATGTTTCCCCTTTTTACATCTCTGATTTGTGTAGTACCAACCAATTCAGCATTGATT TATTGCAGTGTGGATTCTCAGATCGAGTTATGATGATGATGTTGTAGGTGAGTGAATGAGCTCACTGTGATGGACCGAAG GAGTTGGCTATGGCGGAGGAAATCATCTGAGAAAAGTCCCGGTGAGACGGAGAGTTCTGGATCAATGTCATCTCTCTCAG AAAGATTCTCTGATGATCAAACGGTATATATTTATCACTTATCGGTATTTCAATTGACTATGTTTTGATTGTTTTCCCCC CATTTTGATTGCATAGATTAATGTTCCCCTTTCTATCCATTGTTTTTTGGGGGAAGTTACTAGGGCTGTGGCCATTTTGT GAAGTGAAAATCACAGACTTTGTTGAAGGAGAGATGAAAAAAGAAAATGGAAGGTGAGAATGTGAGATGTGGCTTTAAAA CTAGATGAGTAAAACAAAAAAAGAAATTGTACAATTTTGAACAGAGAGTCCCAGAGAGTCTGACATTATGAGAGGTCTAA ATGTGGAAACAAGAAAAAGAGAGGTTATCATGTAATTGACATTTCAAAGGCTTGGTGGGACAATACTCAATAATGCAATT GCAAGAGATTGGACAACAACCCCTCCTTCTCGCTGCTGTATCTTGAGACAGTTTGTAATGTCTAGACAAGATGAGAAGTT GAAAACAATGGTTACTACTTCTTCTGCAGTTTTTACATGGACTTGTTCCTTTTCTTAGCATAAAGGATATTATCATTAAT ACAGTTCTATTGTATTGTGAGATCTATAGCTTGTTCAGATTATTGTAAAATTGGGGGGAAAATGAATCTGATTTGCCCCA ATGTTGTGAAGGTATATTCAGCTCAAGCTACTCAATCACCGGAAGTCACGTCTAAGGCTGCATTAAATGAAGAAGAAGTT ACTGATGTTAAGATTCTTACAGACAAATTAGCTGCTGCTCTGCTAAATATTAGTGCCAAAGAAGACTTGGTAAATCAGCA TTCTAAAGTCGCTGAAGAAGCTGTCTCAGGTATGTAGGTCTCTTTTTTTGTTTTCTTTCACGAAGAAATGTGAGGTGCAT TCAAATCATAACTTGAAATCCCCAAAAAGTGATGGTTTTAGGAGGATCACAAAGGAAAGTTCCCGGTTAAGAAATTCTTA ACTTTTCTTAAAATGTTCTAAGCTCTTCTTTTTGGATCATATACTCAGATCATTCATTACATTTAAGGATTTACATTTCT TCAATTACTATATTGCTGCTTTTAAAGGATGAATATCTAAATCAAAGCTAATTTTGTCTGTATATGATCCATGGGTTCTT CTCATATTTGAACAATCTAGTAAAATGTGTTTTTTCCTGCTTGTCCATGGTGTATTTTTCTTACCTTGAGAAGCCACTAC TATCATAACCCTCTGCTTTAAAGTATAACCCAAATTATTTGAAAAAAGTACCTGTTCTTTTTCTTGCCAGAAAACCTACG CCAATTGACTAAGACCTGTTTGAAAGAGCTTGAGTATATCTTATAACTAGGGGTGTCAAAGCGGGCTTGGCCCGCGGGCT CAACCCGCAAGCCCGCAAAAAAGGGGCGGGGCGGGCCACATAAAATGAGCTCGCGAACCATGCAACCCGCCCCGCCCCAC CCCGCAAATATTGTGGGTCAACCCGCAGCGGGGCGGGCCAACCCGCGGTTTCCCTTTTTTTTTAAACTTCATAGTTAATT ATGGTGCAAAAGGGCATTTATCTTTGAATACAGTTGAGGATCGTGGGATATGGATATGGCACAAGGTGAGTAGCAAATTT TTACAATTATTTACCCAATCATTTTAACAGAGCTGAAGTATGTTCATGCATTTGTATTTCCTTTATGCACTTTGAGACTC ATGTAAAACCACATAAGGGACCGTTAATGCTATTGTCCTATGTTGCTTGCAAGTTTTGCTGCAACTTGCTATACAGATAT AATTTACCATGCTTGACTATTCAAATATAATAGCAAGTTTTGTTTTTTTTTTTTAAATTGAAACAACTATGACAAAAAGA AGAAATCATCCATTGATATTTAAAACATTTCTCAAACACAGTATTTCTGCAAGACTAAAAAGCCAGCCAAATGGAAAGCA AAATGAGCGAAAAACAAATCGGAAAACTGCAAAATGGTAGTAGTTGAACACCTAGAATAGAGAGGTTCCTTTTCCCTTCT TGTCACCGCCAATCTCAAAGTGCTTGCACCTCTTGATAGCATGCTTTGTTACAGCTCATGTACGCAAGTTTTGTTATTGT GTTGTGTGCTAAAAAGAGATCACAGTGCAAGCTTTTGTTTTTATTTATTATTGGGTGATTTGGGTCGAATTTTGTTTTTT AGGAAAAAATAACCATTTTATTTATAAAAAAACTAATTTTCTCCTTTGTGCGGGCTAGCCCGCGAGCCCGCATACCCGCC ATTACGCGGGGCGGGGTGAACTTTTCTAACCCGCGTCTCATGCGGGCTAGCCCGCCCCACCCCGCTTTTATGCGGGCTTA GTGCGGGGCGGGGCGGGGCGGGGCGGGTTGCCCGCTTTGACACCCCTACTTATAACATAAGTGCCAAGTGTAATGAGCTT ATTGCCAATTGACTGCGCTAAGTGTTTGAGAGAGTTTATGTAAATAGATTATGACCTACCTATAAGCTGTTTTGAACTAT TTTCATAAGCTACTTATATTAGCTTATGAAAAAACGCTTATTCCTTACCTATAACCTATCTCGGGCCTATTTCAATAAAT TTCTCAAATTAGCTTATAAATAAACACATACACGAGAAGTGCTTGTTTCCGTAAGCGCTTAATCAAGTTGTTTAATGAAA CGCATCCTAAAATACTTTTATATTGCCTTTTGGTTTTATTTAGGCTGGGAGAAGGCTGAAAATGAAGTGGTGTCTTTAAA ACAACAACTTGATGCTTCAAGGCAGAAGAACTCAATTCTTGAAGACCGAGTTAGTCATCTTGATGGGGCACTCAAAGAGT GTATGAGGCAGCTTCGGCAAGCTAGAGAATCGCTAGACCAAAAGTTCCATGAAGCTGCTGCAAACAATTCTCATGACTGG GAATCCAAAAGATCTGAGCTTGAGGGCAAAGTTGCTGAGCTTGAGGCTCAACTTCAAGCATCAAAAGCAGATGCTTCTGC TGCATCAATTCGTTCTGATCTTCACCAGAAACTCGAGGCTGTGGAGAAAGAGAATTTGGGTCTGAAACTCGAGCTGCAAT CGCGACTTGAGGAACTAGAGTTCAGGATTGTTGAAAGGGATTTGAGTGCCCAAGCTGCTGAAACGGCTAGCAAGCAGCAT TTGGAGAGTGTCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCAGAAGACTGAAAGCAACGTCTCGTAAAACATTTTCTGT TAATGATCACAGGTCTTTGACTGTGTCTTCAGCTTATGTTGAGTCCTTCACAGATAGCATGTCAGATAGTAGAGAGATGG ATGAATGCGAACCAAGCCATTCGGATTCATGGGAACTTGATCAATTTAAGAATGAAAAGGCTAGTGGAAAATTTCATATG GCCCCTTCAACCGAGATCAATCTCATGGATGATTTCCTTGAGATGGAAAGGCTTGCTTCATTGCCGGATTCAGGAAGTGG AAGCCGTTTTGTTGGGGAAGGAGCAGCATCAGATCAATCTAATGTTGGTCAAGATACAATGAAAGCTGAAGTGGAAGCTA TGGTTCAGAAGAATGCTGAATTGGAGAAGAAGCTGGAGAACATGGAAGCAGATAAACTCGAGATGGAGATGATTTTTTCT GAGTGCCAAATGCAGCTTGAGACATCAGAGAATCAGATCAGGGCAGCAGAGTTGAAGGTAGCAGAGCTTCAAACTCAGTT ATCTCTTGCAAACAAATCAAATCAAGAGCTATATGAAGAACTTAAAGAAACAAAAACGAATAGGGAGATGGTTGAGTCAA AACTCAAACTTACTCAAACTGATGTAGAAGAATTGATTTCACAAATCCATTCATTTGAGGAAGAGATTCAGAAGGAGCGA GCTTTATCTTCTGAGAATTTGATCAAGAGAAGGATGTTGGAGGATGATCTTGAGAAGGAAAGAACTTTGTCTGCTGAGAA TTCGATCAAGAGCAGGAAGTTGGAGGACGAGCTTTCAAGAATGAAACATGAAGCTCAAGTTCAGCAAGAAACCAATACAT TGTTAAAGGAAGGTGTTGATCAAGATTTGAAGTTAAAACAGGTTAGTTTGCCAATGCTTATTTGAAACTATATTTTTAAG CCTTCTTTACTGTATTTTTTGCATTGTAGAAACATGCTAGCTAACCTTGTGGCATTTTGTTATGATGAAAATTGTCAAGG GCAACATGCATAAGCATAACTCATCAATCTTCTTTATTTTAGTGAAACAATTCTATCTGTCTATGCTTAGATAAACCTTA TAGTTTTTGTTTGGATACCAGTTGAGTGCGGTGAACATTTTGTTCTGTTTTTACCTCGAAGTGACTGCTAAAGTCTGTTT GCACTCGTGTCAGCAGATATCCAAGCATACCATATCATGTTTTATCAACCAACCAATAATTGTGATACTTATTTATTTAT TTATTAAATGTCTTGCACCAACCATTCGCTTTTTTATTCATATAAAGAGCTTAACATGATCTTCTACTGCAGGAGAAGGA ATTTGCATTGGCTTCTAGTAAATTTGCGGAGTGCCAGAAAACCATTGCATCTCTTGGAAAGCAGTTAAAGTCCCTTGCAA CCTTGGAAGACTTTCTACTTGATTCAGACAAGCCTATGGAGTTAACTTGTGAAGCTACACTGCAGGGTCCTCAAAATGGT GGTGAACAATTGAAATCACATAATAATAGTGATTTGGGTTTGCCGAAAAGAGTTTCTGAACCCCCCATTTCTCAATTGAA AAGTCGTAACGGTTTTGGTAAGCTCGTCCCTAGAAGCAAGAGTGTAAGCAGGGGAGGCACTCACTGAAACATCATGTGAA AGGATGAGGTTGAGTTGTAAATTTGGTTTATTCATTCTTATCCGGCTGGATTCAACATGTATGAATCCTAAGTTGCGTAA TTATATAAATAGCAATGCTTGTTAATGTAAAATTGTTCAAAGTAAAAATAGTAATAATAAAGTCCAATTTTTAAGAGCGT GGTTTCACCTTCGCAAGTGTTGGAATTGAAATAAAGCATTTGATTCTAATAATACTAGCGAAGTAACCCGTGCAATGCAC GGGTGACTGTTG
CDS sequence (LotjaGi4g1v0413200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCGAAGGAGTTGGCTATGGCGGAGGAAATCATCTGAGAAAAGTCCCGGTGAGACGGAGAGTTCTGGATCAATGTC ATCTCTCTCAGAAAGATTCTCTGATGATCAAACGGTATATTCAGCTCAAGCTACTCAATCACCGGAAGTCACGTCTAAGG CTGCATTAAATGAAGAAGAAGTTACTGATGTTAAGATTCTTACAGACAAATTAGCTGCTGCTCTGCTAAATATTAGTGCC AAAGAAGACTTGGTAAATCAGCATTCTAAAGTCGCTGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTGGT GTCTTTAAAACAACAACTTGATGCTTCAAGGCAGAAGAACTCAATTCTTGAAGACCGAGTTAGTCATCTTGATGGGGCAC TCAAAGAGTGTATGAGGCAGCTTCGGCAAGCTAGAGAATCGCTAGACCAAAAGTTCCATGAAGCTGCTGCAAACAATTCT CATGACTGGGAATCCAAAAGATCTGAGCTTGAGGGCAAAGTTGCTGAGCTTGAGGCTCAACTTCAAGCATCAAAAGCAGA TGCTTCTGCTGCATCAATTCGTTCTGATCTTCACCAGAAACTCGAGGCTGTGGAGAAAGAGAATTTGGGTCTGAAACTCG AGCTGCAATCGCGACTTGAGGAACTAGAGTTCAGGATTGTTGAAAGGGATTTGAGTGCCCAAGCTGCTGAAACGGCTAGC AAGCAGCATTTGGAGAGTGTCAAGAAGGTTGCTAAGCTTGAAGCTGAGTGCAGAAGACTGAAAGCAACGTCTCGTAAAAC ATTTTCTGTTAATGATCACAGGTCTTTGACTGTGTCTTCAGCTTATGTTGAGTCCTTCACAGATAGCATGTCAGATAGTA GAGAGATGGATGAATGCGAACCAAGCCATTCGGATTCATGGGAACTTGATCAATTTAAGAATGAAAAGGCTAGTGGAAAA TTTCATATGGCCCCTTCAACCGAGATCAATCTCATGGATGATTTCCTTGAGATGGAAAGGCTTGCTTCATTGCCGGATTC AGGAAGTGGAAGCCGTTTTGTTGGGGAAGGAGCAGCATCAGATCAATCTAATGTTGGTCAAGATACAATGAAAGCTGAAG TGGAAGCTATGGTTCAGAAGAATGCTGAATTGGAGAAGAAGCTGGAGAACATGGAAGCAGATAAACTCGAGATGGAGATG ATTTTTTCTGAGTGCCAAATGCAGCTTGAGACATCAGAGAATCAGATCAGGGCAGCAGAGTTGAAGGTAGCAGAGCTTCA AACTCAGTTATCTCTTGCAAACAAATCAAATCAAGAGCTATATGAAGAACTTAAAGAAACAAAAACGAATAGGGAGATGG TTGAGTCAAAACTCAAACTTACTCAAACTGATGTAGAAGAATTGATTTCACAAATCCATTCATTTGAGGAAGAGATTCAG AAGGAGCGAGCTTTATCTTCTGAGAATTTGATCAAGAGAAGGATGTTGGAGGATGATCTTGAGAAGGAAAGAACTTTGTC TGCTGAGAATTCGATCAAGAGCAGGAAGTTGGAGGACGAGCTTTCAAGAATGAAACATGAAGCTCAAGTTCAGCAAGAAA CCAATACATTGTTAAAGGAAGGTGTTGATCAAGATTTGAAGTTAAAACAGGAGAAGGAATTTGCATTGGCTTCTAGTAAA TTTGCGGAGTGCCAGAAAACCATTGCATCTCTTGGAAAGCAGTTAAAGTCCCTTGCAACCTTGGAAGACTTTCTACTTGA TTCAGACAAGCCTATGGAGTTAACTTGTGAAGCTACACTGCAGGGTCCTCAAAATGGTGGTGAACAATTGAAATCACATA ATAATAGTGATTTGGGTTTGCCGAAAAGAGTTTCTGAACCCCCCATTTCTCAATTGAAAAGTCGTAACGGTTTTGGTAAG CTCGTCCCTAGAAGCAAGAGTGTAAGCAGGGGAGGCACTCACTGA
Protein sequence (LotjaGi4g1v0413200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRRSWLWRRKSSEKSPGETESSGSMSSLSERFSDDQTVYSAQATQSPEVTSKAALNEEEVTDVKILTDKLAAALLNISA KEDLVNQHSKVAEEAVSGWEKAENEVVSLKQQLDASRQKNSILEDRVSHLDGALKECMRQLRQARESLDQKFHEAAANNS HDWESKRSELEGKVAELEAQLQASKADASAASIRSDLHQKLEAVEKENLGLKLELQSRLEELEFRIVERDLSAQAAETAS KQHLESVKKVAKLEAECRRLKATSRKTFSVNDHRSLTVSSAYVESFTDSMSDSREMDECEPSHSDSWELDQFKNEKASGK FHMAPSTEINLMDDFLEMERLASLPDSGSGSRFVGEGAASDQSNVGQDTMKAEVEAMVQKNAELEKKLENMEADKLEMEM IFSECQMQLETSENQIRAAELKVAELQTQLSLANKSNQELYEELKETKTNREMVESKLKLTQTDVEELISQIHSFEEEIQ KERALSSENLIKRRMLEDDLEKERTLSAENSIKSRKLEDELSRMKHEAQVQQETNTLLKEGVDQDLKLKQEKEFALASSK FAECQKTIASLGKQLKSLATLEDFLLDSDKPMELTCEATLQGPQNGGEQLKSHNNSDLGLPKRVSEPPISQLKSRNGFGK LVPRSKSVSRGGTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 17 | 17 | - | – | |
| MobiDBLite | 1 | 54 | 54 | - | – | |
| PANTHER | 1 | 500 | 500 | 1.1E-228 | – | |
| PANTHER | 1 | 500 | 500 | 1.1E-228 | – | |
| MobiDBLite | 18 | 53 | 36 | - | – | |
| Pfam | 81 | 190 | 110 | 5.2E-36 | ||
| Coils | 99 | 126 | 28 | - | – | |
| Coils | 134 | 158 | 25 | - | – | |
| Coils | 160 | 214 | 55 | - | – | |
| Pfam | 189 | 266 | 78 | 1.7E-17 | ||
| MobiDBLite | 347 | 366 | 20 | - | – | |
| Coils | 367 | 485 | 119 | - | – | |
| Pfam | 493 | 580 | 88 | 7.9E-12 | ||
| PANTHER | 496 | 607 | 112 | 1.1E-228 | – | |
| PANTHER | 496 | 607 | 112 | 1.1E-228 | – | |
| Coils | 514 | 534 | 21 | - | – | |
| MobiDBLite | 599 | 654 | 56 | - | – | |
| MobiDBLite | 599 | 619 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0413200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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