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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0426700 |
| Transcript ID | LotjaGi4g1v0426700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BLOC-1-related complex subunit 6; TAIR: AT4G23330.2 hypothetical protein; Swiss-Prot: sp|Q96GS4|BORC6_HUMAN BLOC-1-related complex subunit 6; TrEMBL-Plants: tr|I3T5D7|I3T5D7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0426700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80153328..80159131) extracted from Lotus japonicus Gifu genome v1.2.
TGGGTTTTATTTATTTCAGCCTTGTCTTAGTTATTATTATAAAAAAAAAATATTCACGTTTTTCCGCATTAAGTTTATTT TGTTACTAAAGTGACGCCACCGAAATCGGGGTGTTACACCATCAAACCCCCCTCTCTCACCTCCACCACCGAAACCCCAC CAAATCCATATAACGATTCCAACTTGGTTCAGACTATGGGTAGATTCATAAAGAAGAACAATTCAATTCCTGTTATATCT TGATGTTATGGACAAGAGACAAAAAGATCCAACCCCAAAAACCGACCTAGATGTTCAGTTTCTCGCGCTTTGCGAGCTGC TTCGATTCCTTGCAGGTCTACTTCGATCACCGACTCAGAACTGCTTCGATTTGAAACCCATGTGAAAGCAGACCAAAAAA TCCCTAAACTATAAATACCCATAACCTAGAAGAAACCAGATCTTGCATAAACAAAGATCTTTTGCAAAAATAGCAAAAGA TCTACTCAGAAACAGTTGCACTCCGTCGTCATCAACGCGCGTTGGACTGGTAGAAGAGCTCTGCACCGCCGTTGTCGAAG GAGGAGACGACGTTTCAATCGATCCAGAAATCAACCAAACCCAAAACCCTATCGCACGATGCTTGCTAACCTGGGTGGTG TTCAAGTTTCAACCTTGCTCCAGCTTCGAAACCCAAAAGCAATGAAAACCCAGGTTGAAGAAGGAGAAGGAGCATGGTGG GACTGTGGGAGATCGGGTTTGCGGTGGGGGTGGGGAATTGGAGTTGCCACGCGGGAGGTTGTTGAGGATGGAGATTGAGC TTAGGTCTGTTATGGAGAAGCATCGGCGGCGGGGTAGGGGGTGGCAGTCGCGGAGGATGAGGGATTCGGCGAGGTCGGAA TCGGAGGGGCAGATCTGGTGGGATGGTGGATTTCTTGGCGTTTGGGTGGAGGCGCGTGAGTTGGTTGGTGGTGGCGCGTA AGGTGTGGAAGATGAGTCTGGGTACTTATGTTGTTTCTGTTTTGTTAAAAAGTTGATGAATAAAATCAGTTTTTGATTTT GTAGTTGTCTCTATGTGTGTCACTGGGTTTGTTGTCGTTGTTGATATTTTCATGGATCCATGATAATGATGATGAAAAAG AAGAAGATGAAGTAATGAATATCATGGATTTTTGGTGAGGGAGATGAACTATATTAGCTTAAATCATACATTAACATTCA CTAATCATTCTATTATATATTAATTATTTGTTTTTTCAAAATTTCAAAAAATACAAAATTACCTTGAGTACCAGGTCAAC AGGTAGTGGTGTAAGTTTAGACCACCAAAAACTGGTCCATAATAAATTTTCCCATTTTCAAGGGTCTGAACTCTGAATAG ATACCCCTTTCTTATATTGCCATACTCCTTTCTTATAAAACATCTTTCCAATGAGATGAAAAACACTTTACTTTGAATTC ATATCAAGAGTTGAATACTAATTGGCAGTGTCCGATTTAGTTTAGGGCTCTTTAGTTTATTCGATAAGATCAAATTGAAA AGGAAGGGAAGCAGCAATGGAAGATGGAGAAGAAGCCTCCAATCCCATTCCCAATCCAGTGAGTGAAAGTGAAGCAGAAG AAACCACAATCTCAATCTCAATCTCAGATGGTGGTAGCAGCTTCAATCAGAATGAGATATTCAGAGCGATTGAGATCGTG GAACGAGACTCGTTCGCCATCGCTCAGAGTTTCACTTCTCTCTTCGCTTCACTTCGCTTGGCACTCTCCCAATCCACCAC CACCTCTCTCCACCACATCAATTCCTTCACCCATGCTTCCGCTCGCCTTCAGGAATCAGTGCTTGATGCTGCTACCAAGG GGAATCGCTATATCAATTCATGTCTCAGGTACAAATATAACTTGTTACTGTTTCTTTCTTTGTTTTCAACTTAGAAATCG ATAAAATTAAGATGAAATTGGCTCACTCTCTTGTGATTGGATTTGCAGATTGAATGAGGAGATGAAGAACATTGATGGTC TTGCGTCCCAACTGTATCCTTTTTACTTTGTTGGAGGTTTATATTAATGTCATGGACTCATGGTTTTAGATTGCGGTTGT CGTGTCACGATTGCGCTGCAGTCCTTCATATTGAGAATAAACATGGCTGTCACTGTTGCATTGCGGTTTTGGAAACCTCG ATGTTGCGGTCGTGGACCTTGATTTAATATAGTACATTGTTATGTTCTATGTTTCTGTTGAGGACTTGAGTAGGAACACT TTGGAGTGTTGGAATCCTTAATTGGTTTAAAGAAAAATTCTGCGAAGGCATGTGGATGTTCTGGACTCTGCTGTTAACAA GCTTGTTCATGATGCCTCATGACACTTGGATTCAGTCCTGTAGTAGAAGGTTTGCTTCTCTATATCCCATAACAAGCTCT TAAATGAACAGCTTGAAAAGTTTATCTGTCTATGTAGGTGTGGTTTCATGGATTGTGCTGAGATAGTAATGTGCAAACAA AGCCCCAGTTTATTTATTTTTTCAATTCACTTTGGGCAGGTGATTGAGGGGGGTTATAGAACTAGTGAGGTTTCCTTTTG TGTTCAGTATATAAGTGTTATAAAGTGTTTGCTGGTTGTTCCCTAGTGTCCGTCACAAGATTTTTATGGCGGACTGTTTG ATTGAAGTTTTAGATGTTGTTGATTTATTTCGCCTTTATCATGATTGCTGCTGCTTGCTAGTGCTGTTGCTAGTTGTTTG GATACATAGTTCTTGACAAAATATGTCTAAAGATTTCTTAGTGGTAAGCTATGACAATTGTATACCTATTAAAGCAGCTA AAGAATATTTGAAATGAGTTTGAACAGAAGGAAAGAATGTTGATAAATGAATTCCAATTTGTTGACTAAGTAATTATTTT TTATGGCATCATCTATTGCTTTATTTTGTTCTGAAACGAGTTCAAGAACATAATGGTTGTTGAGAATGCATAATTGTCAT CTTTCTTACTTCAAATGCTGACAGTTCATTTCTGAGCATAATATGCTTCTTGACTTGTTGAGCAAGCCTATGCCCATCTT GCAAAAAGATGGGGTGAGATTACTAGACTCTCAGGGGAACAAAGGATAAAGTTCAATAAAAAAGAGACATGGGTAATGAA TGCCTAACATGTCCAAGACCAACTAGCTCCTGATGCTTTTGTTTGTGTTGCACTGATAAATATGGTGTAAACCGAAGCAT GGTTGCCGATGTGCCAAATAGTCAGACAATGTTTTATATCAGATGGGAGCTTTAAAATGGCATTTCTAACCTCAAATGTA AAGAATCTGGAGAAGAAGCTTTTCCTTTTTTTTCAAACTCCATGCTTTACCATTGTTCCTACAGAAAATAGTTCTCACTT CTCACCTCAAATGCTCTATTCATTTTCTTCTCTACTTCTCTTCCCCGACTTCTTTCTTCCCCCTTCATCCCCTATAGTTA AACACAATTTCAATCAACAATTATTTGTTTTGTTGATTTTTCACGGTTAATGCTATCATTTTAATAACATTTATATTTTT TAATTTATCAATAAAACACAAACTATATTTCAATTAATTAAAACATAGATAACGAGCCCAGTTTGTCTATAATTGAGGCA AAACTAACTTATGCAGTGTCTATTATAAGAATCCCTAAAAGGTTTTATATATCTTTTTATCCTCAACTAGTAGCTAGATT CTGGTTGAGGAAGCCTAGAAAAAATCAAGGAATTCATTGGCAAGGATGGAATAGGCTTTTGGGACTTGAATCACCTAAAT TCTGCCCTCTTAGTTAAACGAGCTAGGAGTTGGAGGATTATCTTAAACCCAAGCTCGTAAATCATAATACTAATCAATCT ATCACAGGCAGTCAGTAGTATATGGAAATGGTTATGGAAGCTGAAGTTCTGGAGAAGATCAAAATTGTCTTATGGAAATT TGTCATAACATGCTTCCTACCAAGGCTAACCCAGATAGGATGCATCTATATCAGGATACTCTGTCTAGTTTTGTCAATGG AGCCAGAAACAATGGAGTACCTGTTCTTTAGATACTCTTGGATCAGACTTGTGTGGTTTGACTCTGAAATTCAGATCATA TTTAAAGAACCCAGTCAAACATGGACGAGTGGTTATAACACCAACTTAAACATGTTATAGCATGTTTGGATCAATTATTT TTTCTCAGAATCAGTGTTATCAAAGCTTCCATGGCATATCCCGCCTTACTTCACATTATTATTTGTCATATATGTAACAA CCTTGCTCAGAATCAATTTTAGCACTCAGAACCTACTCATTAGCTTCTTCATAAAAGTGATTATTAGATATCCAATGGTA GAACCAAACATCCTCTTAGAGGGAAGGGAAATCACTTTCACTGCTATGGATCAATTGCAATAGATGCTTTCATTGCAAAA GAGAGAACTATGTGGTCAAGTGCATATGTATAACCGACACAACATATTATGACATTATGATTCATATTTTGATTTTCTGA TGCTGTCAGCACTGGAACACGTACCTGATATACTGTCCGCTATGCCGTATTATTTTGTTTGGTTTTTCAGACTAGTGACG CATGTTACTACTATCTAATAGTTTGAATCGTTCCCCCATAAAGTTTGTGAGCAATGCTAGCTTTATGCAACAAGCAAGAT ACTGCTCCATGTCTGTCTAACAACTTTTTTTAATGGAGCAGCAGTCTGTTGCCGGCACGAGTCATAGTGAAAGTTAAAGG AAATCTGTCATAATTCAAAATCTTTGATTCAATTTTATTTTTGGACGTACAGATATAATGTTTAATCAAATTAACACTAT CATTTTTCTAACCTTTATTTCTCATTTAGAGTTGTAGACTAAACCTTCCATAGTTACTATCAAACCATCCACCCTCAATC ATATTCCACCACTTCCAACATTGCCACCCTTTGCCATCATCACCTTGCACCCTCATCGACAATGGTGGCAATGGTAGTGG AGGCGGTGAAAGGTGTTGGTGATGACAAGGTCGATGAAGTAGGATATTGAGTGGCGGTAATGTTGATGGATGGGGTCCAA TAGCGGTGACATTAGAGATAGAAGGCAGCAATGGTAGATTGGTAGTGGAGAAGGGTGTTTAGTGGTAATGACAACTGCTA GATTGTAGAGATGTAGTGTGTCAAGGGGTGGCCGCGACGACATGTAGCAAGTTAAAACAATGGAGGGTGTCAAGTGATGA GGTAGTGGTGCTGGGTAATAGGTGTGGCATCGACAATTGAGGTTATGAGGAGGCGATGGTAGCCGAGCGTGTTAGACAAT GGTGGTTGTGGAAGGTGGATGAGGACGATGATGATGGAGGTGGAAAGATGAGGTACAAGAAAATAATGAAAATAAACGAT TGACATGCTTTTAAATTAAAACAAAAATCATAATCACAAGAATTTTTTGTGATTTTAAAAAATATGTATGAAATTGTTAT GAATTTGAGTTAAAAAATCTTCCAATGCAGAATACAAATTTATATTTAAAAAATAAAAAATTCACAACCACCCCAAAATA TTTTTAGTATCAATTTATACTTGAAAACATATTTGGGGACACTAGTTTGAAATTTACACAAGACATGGCCTGTTGAGTTT ATGGTAGTGTTTGGTGACGGAACGGAACAGGACATAACAGAACGGAACGAGACAGAACAGGATGGAACAGGACAATAATG TTCTATGTGTTGTGTTTGGTAACTCTAAGTCAATAGAACAGAACCATGATTTTAATTACATATATAACCCTGCATGTTTA ATATTTGACTGAGGAAAACAAATTGAACTCAATTGAACATTTTG
CDS sequence (LotjaGi4g1v0426700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATGGAGAAGAAGCCTCCAATCCCATTCCCAATCCAGTGAGTGAAAGTGAAGCAGAAGAAACCACAATCTCAAT CTCAATCTCAGATGGTGGTAGCAGCTTCAATCAGAATGAGATATTCAGAGCGATTGAGATCGTGGAACGAGACTCGTTCG CCATCGCTCAGAGTTTCACTTCTCTCTTCGCTTCACTTCGCTTGGCACTCTCCCAATCCACCACCACCTCTCTCCACCAC ATCAATTCCTTCACCCATGCTTCCGCTCGCCTTCAGGAATCAGTGCTTGATGCTGCTACCAAGGGGAATCGCTATATCAA TTCATGTCTCAGATTGAATGAGGAGATGAAGAACATTGATGGTCTTGCGTCCCAACTAAAAATTCTGCGAAGGCATGTGG ATGTTCTGGACTCTGCTGTTAACAAGCTTGTTCATGATGCCTCATGA
Protein sequence (LotjaGi4g1v0426700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDGEEASNPIPNPVSESEAEETTISISISDGGSSFNQNEIFRAIEIVERDSFAIAQSFTSLFASLRLALSQSTTTSLHH INSFTHASARLQESVLDAATKGNRYINSCLRLNEEMKNIDGLASQLKILRRHVDVLDSAVNKLVHDAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 9 | 145 | 137 | 1.6E-56 | – | |
| MobiDBLite | 11 | 31 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0426700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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