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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0431000 |
| Transcript ID | LotjaGi4g1v0431000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Membrane-associated kinase regulator, putative; TAIR: AT1G64080.1 membrane-associated kinase regulator; Swiss-Prot: sp|Q9SH58|MAKR2_ARATH Probable membrane-associated kinase regulator 2; TrEMBL-Plants: tr|V7CMP9|V7CMP9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0431000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80512833..80514543) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGCTTGTTTTAATATGTCGTGTCTCACACATGACAAACCTGCTGCAAACAAAGCACAGCACAGTGGCAAACTGACAG AATTATAGTAAAATACAACTCCTTACTCATCCCTTCACTCTCACTCTCTGTTACTTCTTCTCTATCACTCTCCCACCTTC AATTGACTACTGGCTCTCCCAACCATGGAAGCTTTCAGCTTGCTCAAGTACTGGAAAGGAGCTAGTGCTCTGGCTCCCAC ACCTTCTTCCGTCACTGCAGACACCACCACCGCCATCCTCGCCGCCGCAGCTCAAAATGATTACGAAACAACCGACGACG ACGGCGATGATGGACCCTTCTTTGACTTAGAGTTTGAAGAAGAACAAGATTCTGAAGAAGATGCTCCTGAGAATGAGAAT CCCAACGATGATGAATCAGAGAGCGAGAGCGACTTCAACCTCACACTTTCTCCTTCAAGCAATGACTGCACTGAAAACCC CAACCTTCTCCTCTCACCTTCCGACGATCTCTTCTTCAAAGGAAAGCTTGTTCAGCTGGAGCCTCTCAACAACGCTTCCG AACCAAGCTCCAAACCTCACTTCACCGCCTCATTGTTGAAATCCGCCACTAAGTTCCGGGTTTTCAAGAAATCCAAGCCA AATCTTGCTGCTTCCGACCCTGTTCCTCGAATTTCGAAGCACCCGGAAACAGAGCATAAACAGAGGAAGCTCTTCACGGT GAAGTTCAAGGTTGATGAAGCTCCCATTGTGTCTCTCTTCACCAGAGATAACAGTTCCAAAGTTAACAAGGCTTCCCAGA AGCAGAAGAAGCAGAACGCGGAAGAATCATCACCTTCCTCTGTTTCCGATGAGAAACGTTTTTCAAAGGAAGCGATGCAG AAGTATTTGAAAATGGTTAAGCCTCTCTACATAAGGGTTTCTCGGAAGTACGCGGAGAAGCTAAGATTTTCCGGGCAGCT CAACGTGCCGCCGCCTCCGCCGGAGAAGAAGACGGAAGCAGAGGCCTCTGAAAAGGGAGGGAACTGCGTGAAGAGTCAGA AACAGGGGACTCTGCCTCTGCATGCAGGGCTGCGAGTTGTCTACAAGCATCTGGGAAAGAGCCGTTCTGCTTCGGCAACA GCACCTGCTCCGGCGGCTGATGCAGCCTCTTCACAGCGGCGAGATGATTCACTGCTGCAGCAGCACGACGGGATTCAGAG TGCCATTTTGCATTGTAAGAGGTCCTTCAATGCTTCCAGAGGTAAATTGTCGCTTTCCATAAATGGGGACCATTTTGCTT TTGTTTTTTTGTTATTATTTCTGTAGAAGATTTTTTAGTAATTGAGTAAATGATGGTTGTTGAAGAAGATTAACTTCAAT TCAATTGTTGATACAGAATGTGAATCTTCTCTGAGCGATCCATTGCATGAGGTATCTCCTGCTTTATCAAGAAAATCTAC CAATGAAGGCAAATGAGTTGTTTTATGTGCAAAGGGAAATTTTACTATTTCGACTCAGTGTAGGAGCATGCTACATTTTG AAAGGGTGTGTAACTGTGTATACTGTAAAAAGCTCTCCTTTCTGAGAAAGTGAAAGAAAATTCAGATCTTTCTGTCTATG TATCTGGGTAGCACCATCTTTGAACCAACAACTTCTGTGATCCTTATGTAAATAATTATTAATTAGTAACTGCATTATTA GTGAAATTAAATGGGTTTATTCTTGTCTAAA
CDS sequence (LotjaGi4g1v0431000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTTTCAGCTTGCTCAAGTACTGGAAAGGAGCTAGTGCTCTGGCTCCCACACCTTCTTCCGTCACTGCAGACAC CACCACCGCCATCCTCGCCGCCGCAGCTCAAAATGATTACGAAACAACCGACGACGACGGCGATGATGGACCCTTCTTTG ACTTAGAGTTTGAAGAAGAACAAGATTCTGAAGAAGATGCTCCTGAGAATGAGAATCCCAACGATGATGAATCAGAGAGC GAGAGCGACTTCAACCTCACACTTTCTCCTTCAAGCAATGACTGCACTGAAAACCCCAACCTTCTCCTCTCACCTTCCGA CGATCTCTTCTTCAAAGGAAAGCTTGTTCAGCTGGAGCCTCTCAACAACGCTTCCGAACCAAGCTCCAAACCTCACTTCA CCGCCTCATTGTTGAAATCCGCCACTAAGTTCCGGGTTTTCAAGAAATCCAAGCCAAATCTTGCTGCTTCCGACCCTGTT CCTCGAATTTCGAAGCACCCGGAAACAGAGCATAAACAGAGGAAGCTCTTCACGGTGAAGTTCAAGGTTGATGAAGCTCC CATTGTGTCTCTCTTCACCAGAGATAACAGTTCCAAAGTTAACAAGGCTTCCCAGAAGCAGAAGAAGCAGAACGCGGAAG AATCATCACCTTCCTCTGTTTCCGATGAGAAACGTTTTTCAAAGGAAGCGATGCAGAAGTATTTGAAAATGGTTAAGCCT CTCTACATAAGGGTTTCTCGGAAGTACGCGGAGAAGCTAAGATTTTCCGGGCAGCTCAACGTGCCGCCGCCTCCGCCGGA GAAGAAGACGGAAGCAGAGGCCTCTGAAAAGGGAGGGAACTGCGTGAAGAGTCAGAAACAGGGGACTCTGCCTCTGCATG CAGGGCTGCGAGTTGTCTACAAGCATCTGGGAAAGAGCCGTTCTGCTTCGGCAACAGCACCTGCTCCGGCGGCTGATGCA GCCTCTTCACAGCGGCGAGATGATTCACTGCTGCAGCAGCACGACGGGATTCAGAGTGCCATTTTGCATTGTAAGAGGTC CTTCAATGCTTCCAGAGGTAAATTGTCGCTTTCCATAAATGGGGACCATTTTGCTTTTGTTTTTTTGTTATTATTTCTGT AG
Protein sequence (LotjaGi4g1v0431000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAFSLLKYWKGASALAPTPSSVTADTTTAILAAAAQNDYETTDDDGDDGPFFDLEFEEEQDSEEDAPENENPNDDESES ESDFNLTLSPSSNDCTENPNLLLSPSDDLFFKGKLVQLEPLNNASEPSSKPHFTASLLKSATKFRVFKKSKPNLAASDPV PRISKHPETEHKQRKLFTVKFKVDEAPIVSLFTRDNSSKVNKASQKQKKQNAEESSPSSVSDEKRFSKEAMQKYLKMVKP LYIRVSRKYAEKLRFSGQLNVPPPPPEKKTEAEASEKGGNCVKSQKQGTLPLHAGLRVVYKHLGKSRSASATAPAPAADA ASSQRRDDSLLQQHDGIQSAILHCKRSFNASRGKLSLSINGDHFAFVFLLLFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 354 | 354 | 1.2E-120 | – | |
| PANTHER | 1 | 354 | 354 | 1.2E-120 | ||
| MobiDBLite | 36 | 100 | 65 | - | – | |
| MobiDBLite | 41 | 82 | 42 | - | – | |
| MobiDBLite | 83 | 100 | 18 | - | – | |
| MobiDBLite | 197 | 217 | 21 | - | – | |
| MobiDBLite | 197 | 225 | 29 | - | – | |
| MobiDBLite | 256 | 286 | 31 | - | – | |
| MobiDBLite | 307 | 329 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
Expression pattern of LotjaGi4g1v0431000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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