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LotjaGi4g1v0441800.1

Overview

Field Value
Gene ID LotjaGi4g1v0441800
Transcript ID LotjaGi4g1v0441800.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Caffeoyl-CoA O-methyltransferase; TAIR: AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9C5D7|CAMT3_ARATH Probable caffeoyl-CoA O-methyltransferase At4g26220; TrEMBL-Plants: tr|A0A0B2NWK0|A0A0B2NWK0_GLYSO Putative caffeoyl-CoA O-methyltransferase; Found in the gene: LotjaGi4g1v0441800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81544183..81546318) extracted from Lotus japonicus Gifu genome v1.2.

ATTAAAATGGCTACTACAACAGAGCAGGCATTGCAATTCTGTAAACTGAGAGAATAGAGGATTTGCCAAATTTGTAAAAT GTCCGCTAATACTGGAATTCTTCAGAGTGAGAAATTGACGGAGGTTCGTTTAAACTTTTTTTTCTCGCATTTTCATTGAC TTCAACTTTAAAATGCTTAATCCTATTAGCTTAACCCAACAATGTTGTGGCAGTATATACTGGAGACCAGTGTTTTCCCA CGAGAACCAAAGATTCTCAAAGAGTTAAGGGATGCCACTGCAAGTCACCCTTGGTAACTATTCTTCCCAACACACTGTTA GCTTAAGATTACTTGGACACTGACACAAATATGGACATATAGCATGTTTGGGTCAACTTTTACTATTTCAGAATCAATTC TGGCACACAAAAATACTCATAGAAGCTTCTCCCAGGAATGATTCTAGCTTTCAAGTCAATTGTCCAACATATTAATGTTA ATGGTGTCAAAGATGCAAATATAACATCATTAATATATTTTCATATAATAGTGTAAGCCTTAAAAATGGTTAGTTTATCA CAAAGATGTTACACACATGCTTGGATATCCGGCGACATTTGATTCTAAATGAAAAAATAATTTCAGGGAGAAGTTTCTTT GGATAGCTTATACGCGCCATTGTCAAAATTGATTTTAAAAAATAAAATAAAATCAGTTGATCCAAACATATTTTAGAAGG TCTTTTTTGCATTGTTTACTCCTGAAGTTCAAAGAGCTCTTGTTAGATACATGTATCCGAGATGAAATTACCAAACCATT TTTGTTCTTTCACCAAACAAGTGAACAGCCTATAATTGACTCATGAAAAATGACTGTTTTGATAAGATTGGTTGCCAAAT CTAACACTTTGTTTATGGGATATCATTGTTATTCATCAGGGGCTTCATGGGCACAGCACCCGATGCAGGTCAGCTAATGG CCTTACTCTTGAAGTTGCTGAATGCTAAAAAGACAATTGAGGCGGGAGTTTTCACTGGATACTCTCTTCTTCTCACAGCA CTTAGCATTCCTGATGATGGAAAGGTTTGCATATGCTTTTCTGCTTATCTCTCTAATATATGCTTATTTCCCCATACAAT ACAAGTCTGTTTTATGTCATTATCTGCCTATAATAGATTATAGCCATCGATCCAGACAGAGAAGCTTATGAGATAGGACA GTAATTCATAAAAAGGGCTGGTGTAAAACACAAGATTGACTTCACAGAGTCTCCAGCTTTACCAGTTCTTGACATACTCT TAGAAGATGTGAGCATCTTTGCTCTTTCTAAAATTTGTTTGAACTTTGAAGTTACTTTCTAATTATTGTTTATAGCTTGT TTGGTTTCACAATGAAATGCTCCAAAATCACTTATGGTTAAAAGTTGCAAGCCTTAGCTTGTGAATAAATGTGTCTAGGA TTTTGTGCAAATCATGAAACCATACATGCATTTAGAGGGTATTACTAGCTAATGATATATGTGTTGTTTTCTTTTGCAGC CTTCAAATGAGGGAACTTTTGATTTTGCCTTTGTTGATGCTGATAAACGCAATTACTGGAATTACCACGAGCGGTTGGTT AAACGGGTTAAGATTGGAGGGTTGATTATCTATGATAACACCCTCTGGGGTGGAACTGTTTCCTGGTCTGAAGAGGATGT TCCTGCACCCAAAAGAGGAGTCAGGCAAAGTACACTGACTTTCAACAAAGCCATTGCAAGCGATTCACGCATTGAGATTT CTGTTGCTTCAGTAGGTGATGGGTTCACCATCTGCAGGCGTGCTCATTGATCCTTACTTTCCTATGTTGTATTATGGTTA AAGTTTTCAGCGAGTTTACCAAGTTCATGTACTAGACCATGTTTGGTAGGAAGTATTTAAGTGAATAAAGCTAATGGTTG TTACTAACAAGTAACAACTCATTTTGCTACTATTTTGAATTTATTATATATCATATTTTTCTCTCATAATAGAAAATAAA TAATAGTTAAAATAATATGGTGAAAAACTACACTGCCCATCTTTCGACCCACACCTAATTCACTATTTAATTGTAATGTA GTTGCTGTTGAAGCTTCTTGACTCTGTGTAAAGAAGGTGGTCATTTTATTATTTTT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0441800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCGCTAATACTGGAATTCTTCAGAGTGAGAAATTGACGGAGTATATACTGGAGACCAGTGTTTTCCCACGAGAACC AAAGATTCTCAAAGAGTTAAGGGATGCCACTGCAAGTCACCCTTGGGGCTTCATGGGCACAGCACCCGATGCAGGTCAGC TAATGGCCTTACTCTTGAAGTTGCTGAATGCTAAAAAGACAATTGAGGCGGGAGTTTTCACTGGATACTCTCTTCTTCTC ACAGCACTTAGCATTCCTGATGATGGAAAGCCTTCAAATGAGGGAACTTTTGATTTTGCCTTTGTTGATGCTGATAAACG CAATTACTGGAATTACCACGAGCGGTTGGTTAAACGGGTTAAGATTGGAGGGTTGATTATCTATGATAACACCCTCTGGG GTGGAACTGTTTCCTGGTCTGAAGAGGATGTTCCTGCACCCAAAAGAGGAGTCAGGCAAAGTACACTGACTTTCAACAAA GCCATTGCAAGCGATTCACGCATTGAGATTTCTGTTGCTTCAGTAGGTGATGGGTTCACCATCTGCAGGCGTGCTCATTG A
Download CDS Sequence

Protein sequence (LotjaGi4g1v0441800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSANTGILQSEKLTEYILETSVFPREPKILKELRDATASHPWGFMGTAPDAGQLMALLLKLLNAKKTIEAGVFTGYSLLL TALSIPDDGKPSNEGTFDFAFVDADKRNYWNYHERLVKRVKIGGLIIYDNTLWGGTVSWSEEDVPAPKRGVRQSTLTFNK AIASDSRIEISVASVGDGFTICRRAH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51682
1 185 185 22.053
IPR002935
PANTHER
PTHR10509:SF61
2 90 89 1.5E-93 –
PANTHER
PTHR10509
2 90 89 1.5E-93 –
Gene3D
G3DSA:3.40.50.150
2 90 89 2.4E-24 –
SUPERFAMILY
SSF53335
10 184 175 3.02E-26
IPR029063
Pfam
PF01596
19 90 72 1.9E-22
IPR002935
PANTHER
PTHR10509:SF61
91 186 96 1.5E-93 –
Gene3D
G3DSA:3.40.50.150
91 185 95 4.3E-29 –
PANTHER
PTHR10509
91 186 96 1.5E-93 –
Pfam
PF01596
93 184 92 1.4E-32
IPR002935

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0441800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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