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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0447200 |
| Transcript ID | LotjaGi4g1v0447200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7SK snRNA methylphosphate capping enzyme; TAIR: AT5G51130.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q6NPC9|BIN3D_ARATH Probable RNA methyltransferase At5g51130; TrEMBL-Plants: tr|I3TAM8|I3TAM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0447200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81967826..81973934) extracted from Lotus japonicus Gifu genome v1.2.
AAACCCTAATATTACCACCTTCAGGCACTTTACCTAAGAAAATATTAATAACGCAGCAAACGTGAAAAATAAAAGAAGAG GAGCAGTCTTGCAAGGTGAAACCCACCTCCCACTCTTCATCTCCTTCTTGCATACGAGCCGAACCGGCGACACCAGCGGG CAAGTGAGTAGTAACTATAGACTGCGAGGAGGTGGTGGCGGCACCAGCACAACGTCCGTTTTGCCCCGGCGATTGACCCT TGAGGGTTTGAGTTCAGAGTCTTCAATCAATGGGAAAGGGTGGTGATGATGACGAAACCCAGAAGCACAACAACAACAAC AAAAAGCGCAAACTAGTTTTCCCTTACGGCAACTACAAGACTTACTACGGCTATCGAGTATGTATTCAATCTTCTTCCCA ATGAGCTAGTGTTTTGCTGTGTGATTGATGTTTTATCAATTTGATTATGTTTCAGCTTGCTCAAGGCATGGATGAAGATC CTCGCTTGAAAGTGTTGAGGAAAGAGTGGTTTCAAGGCAAAGACTGTCTTGATATTGGCTGCAACAATGGGTTAATCACC ATCCAGATTGCTCACAAGTTTCACTGCCGGACCATTCTTGGAATTGACATTGACTCTGATCGAGTTCAGGATGCATATTG GAATCTGAGAAAAACAGCTAGATCCAAATCTGCCCCTGCGAAAGCCTCCAAACTTGAGGACAAGGACCATTCAGAGAACA ATGTTGCGGTGGTGTCTAATGCCGATACAGATGAGACTTCAAAAGAACCATCTTCTTCGGAGCAAATTGATCTGATGGAT ATAGTTTCATTTAAACGAGAGAATTTTGTTCAGAGTTGGCACCCACCCGGAAAGCACTATGATACAATTCTTTGGTAACT TGTTGTTGGTTTGTTTTAACTAAATAAAACTTTGTAAGGGAGGAAGGTAGAAATTTGCCAGTCCCTGTGTCTTTTAGGAT GCTAACAGTCCTGTTTAAAATTGTGTCTTTGAAATTTCTTTTTGAGGTCCTTTCCAGCCTTTTTTTGGGTTGACTTCTAC ATGATAGTTACTATCTGAATGGATTACCTTCATGTTATAGTTTTGTATGTTTTAGTGCCCAGAATTATATAAATTTGCCC TCTCCAGCTTGAGTGCACTTGCCTTCATATTTGCCAAGCCTTTGCTTCATTTTCATTTATTTGCTTGACATGTCCTCTCT GCTATGGAATTCATATTATTTGAATTTGATTATTTAAATTAATATCCAATGCATCTGTGAGAAAATAAATTACCTTTTGA CATGCAGTTTGAGTGTCTCAAAATGGATACATCTAAATTGGGGGGATGACGGTTTAATTACATTATTTTCAGAGACTTGG AAGCTGCTCAAACCTGTAAGTATCATCTCCTTCCATCTACTCTTTGAAGTTTTAATTGCTTATATAAAAAGTGTTGTTGG ACAAAGAAAAAGGCATGATATATGGGACCTATCTAGCTAGAGGAAGTGGTTTATATGGTGAATTAAGAATTAGACTAAAA TTCATGGCTGCATATGTTCTATTCTAAACAGCCCACAACTATCGCCTTCTATTCTATTTATCTCGGTAATCATGGATGCT TTCTTCTTCACTCTTTCTCAAGGCCCCATGTCTCCACTCTATTCCAATGCCTTTTTTCTGTTCTTCTATCTGTTCCAGCT ACGATTCATTTCTTAACTTGACTGATTAGTAGTGCACATGTTCTCTGGTAAACCACGCACGAACATCCCTACGTTTCTCT AAATCTATTATGTTGTATATGTAAAACCTTTTATCTTCTGAGCAGGGTGGCATTTTTGTGTTGGAACCTCAGCCATGGAA TTCATATGTAAGCAATCGTGATGTCTCTGAGGTAACAATTAGCTTGCCTTTTGTGACTATCAATCTTATATTTCAAAGAG TTCTGAGAAGGGGAAACCTAGCTAACTTATTAAATTTACTGTAGAGATTTCTTGGAACTATTCATTTTGTAAATTTTCTG CATGGCGTGGAATCATTTCCTGAAATCTTAATCTATGCTGTTTAGGGTTTTGCTTGTGAATAAAGCAAATCTTAGCTTAA ATGGATAGACGTCCTTCTGTTTTTTCTTCTTCCATAGTTCTATTTTATGTTCGGGGAACAACTAATGCATTAGTGCATTA TCAAAATGCAAATGTATGAATTTTTGGTTATGCTTTTAAGTTTCCTTACCCCTAGCCAGATATCACTTGCTAAATATAAG AAATGGGGTTATCAAATCATCAATTTTTTTTTTCATTATGCAGACCACCATTGCCAACTTCGGCAATATTATGTTTCGTC CAGAACAGTTTCAGGAAATACTGCTAGATAAGGTTTGTATCAAGTATTTGTTTGGAATGTTGCTTTCCGTATTTCAAGTT TGCTCAACTAGCAATAAACAAGCATTTCTTCTTCTTTGCCTATTTATTACACTCTTATTCAGATTCTAACAGGCAATATT TAACTCATTGTAGATTGGATTTAGAACAGTAGAAGATATCACTTCAGGGTTGACTGGTACCAAGGCTGGTTTCAATAGGC CAATTTTGGTTTTTCAGAAATGATACATGTAGTAAGTCAGCTGCAGAGTCAAAGTTATTTAATATGGAGTCATTCTTCCC CATAGAGAAGCGTCTGTTACATTTTTTGAAGTCGGTAATGGTTACTTGCGATGAAGCTAATGTTCATATGTGTATGTTTT TGTCCATTGTGAATGATGGCAGTGAAGCAAATTTTTTGTTGATAGGGGCTTGAATGTAGAGAATGGAAATACAAACTTGT ATGTCTTTTGTGTATTTTGCCACTAGTATGTCAATTTGATTCTCTCATTATCAGTAAAATCAAAGAAAAGGAAGTAATGA ATGTCTTTTTAAGTTCAGATTAAGAAGAAAAAATAAGAAATGCAAATTCATACCAACATATTGATAATTTCTCACCGTTT TTTAACCACATCATTTGAGATAAGGATATCATCTAAGTTCTATCTAATACATACTAAAATAACTACCAACATCAAGAAGC AAATATACACGGATCTGACCAAGTTTTGAGCAATTTTGACACATATTTCAGACAATCACACTCAATTAGTAAAAGCTGGT AGTATGATCTATTATTGCTGCAGAATGACTGAAAATGTTCCAAATTGATATATTAAGAGGTTACCCACAAGCTCCTCCAA GGCCCTACTAGAGTATATAGATTAGTTGAACAAGTGGTTTTTGTTTTAGAAACAACTGGTTCTACTGCTGCTGCAGACGT TGAGTTTGAAGAGTCCAAGTTGCCTTGACTTGATTTCTACACTCAAGATCATCTTCAAGCTCATCAGATTCTCTAGATGT ATCACTCCGAATTTCTCAAGTCATCCGTGCTATATGTTGTGCTCGCTTTCCCTTCCTATCATCATTTGCTCCTAATACAA CCACTTTATCTTATTGATACTTTTCTGCTTGCCCATTGCCACTTTGCCAGAAATAATTAACTCTGAATTTGCTTTCTCTC CCAAGTTAGTTTAGGCTGGTGGAAGGTTGAACACCTCCAGGATAGACAAAGTTAGGTATCTTACAACGTTTTACATGGGA GACCTTGATATCCATTCCAGGTTTCCGTAGAGTGTACATGTTGATAGTGTGCTTAAATTTTTCAATAGCTAATCTTATAT CAAATTGTTCACCTTCATTGAAAGGACCCTGCTTCCGTTGCAGACCCATGAAGTAATAGCAGTGTAAAGGTCTTGATTTG TCAGAAAAGTCACCAGGATGTTGATGACATTGAAGCATGACAGAAGTGTGCTTCTCAATCTAGATGTTTAACAGACAATG AAGTTAGGTTATTTATATCTAAAGATCATAAATAGAAGCAGAGGTGAGAAAGAAAATAAGGAAACAACAAACAATATGTG CATGTTTGGATACACGATGAAAAATCACGGTGAGTCACAACTTCCTTTGATTAAAAATCATGGTGATTCATGATAGTTTT TCACTGTGTATCTAAACATACCCTAACAACACAAACCTTCAATGTCAACATGCGCAGACGAGACTTAACCAAACCATTCC ATTCTCTAAGATCATCCACATTTTCTGCAGAAATAACTATCTGCAAATAATTCTTATAAGCTTCAGAAAAGGGATAAGAC TCAAAAAGAGTATCCCAATCAGCCTTGCTAGCCTCCATAGCCTAAAAATATCAGAAACATCACATTAAGCAATCTTAATA ACAAGTATAATTATAAATTAAATCATTATTAATTAAGTATTGGCCAACCTTTACAGAAAACACAACAAACATGCTAGTAT ATTTCTGGAATCGTAGCTCAAACATGCACAAAATAAAGAATCATACCTCACATATTTCACTCCCTCTCTGAAACTCATCC TTCATAATACGCAATGTACTTGAAGACACATTGTAACTAGAATTCCAGCAAGGATAAACAGGAGTAATTATCGGCATCCG ATGGGATCTATCCCTAGGATATTTTCTAGGATCCCAAACTTGAAGTCCAAGAGATCCTTCTTCAATAGGACAAATCATTA CAGGATTTGGCCAACGCCACTGAGTATATACCCTGAAAAACTGAGACACTAACATATTCGGCAGTGCATTGGGAAATAGC TGACATATTCGAGCTATAAGCAATGCATAGTTTATACCACCAAGAAAACCAGTAGCCTGGGCACAACATATGAAGAAGCA TTAGGAAAATCAGAACATAACAAATAACAGTGAATAAATTCAGGTCAAACAGAAAAGAACACCAAAGATATCATCTAGAG TAGGAGCTTTGACATACATTTGAATAAACTCCACGACGCTTCGCCCATAGCCTAATGCATCTCAATGCCATTTGAAAATT CTGCATTTCATAAACAGAAACGCAATCAATGAAGAAAGTCACAGAAAGCTGAAGATAACTTCTCTTGTCTTTAAAATTTA TATACACTACCTGAATATTTGGAACCAAATGCAAGATTTTATCGGTCATTCGACAACTATTAAGACTACGAACAGTTTGT TCGTCTGCATTTTGTAATACTGAGTCCTGTGAAATATCCAAGTCCTGTCCAACAACAGAAAAAACATACCATTAAGTGGT ATGCAATAGGTATTATCACCCTTCAAATTAAATTAAAAGAGTGACAAATGGAAGTATGGAACAACTTGAACCTATTAATC TCACATAAATCACTTACTTCCGGAATAACCAACAAGGATAATCTTGCATAAATGAGATCTATAGAAACACCATTGACCTT GAACTTCATCAGCGGAACAGAAGCATTAGGTACAGGGTGCAACTCTGTTACTTCTGGCATCTCAGATAACACTTTAGGTA GCTGGCCAAAGAAATCCTTCTAAGGCCAATTCAAATAAAAAGAATGGGAAGAATTATAATACATCTGTGGATGCATATAT AGGTCCCACACATATAGCGTCTATATCTGCTCCAGGACCATGCACCTGCAAAATTTGAATTAAAATGGTAATAGTCAAAG CATAATGCAAGATGCAGAGATAGTGAGAAGGGTTTGGAAGATAAAACAGCTTCTTAATCATACCCCAAGCCCATAGGAGC CAAAGGTAAAAACCTTGGCATTTGCTTCTTGTACCACTTGTTTGTCAAGTTCCTTAGCATGGCTAATGGTTTTGACCCAA ACCTTCACAATCTAATTCATTTTACAACATCACATCCAAAACAAATGAATTCATAAGGAGCTCCACTGCATATCATAGAT GGTATAAGATGAAATGCAACAATAAAATATTCAATTCCACAAAAGATACATGCACTAGAATATTTCCCAAGAAGCCATAT TCTTTCCTATCCCTCAATTTCTCAGTATGGCAATCACAATGTGTTTCGATTGTCCGGGCGCATACTATGCAAAGCATGGT AACTCCATAAGCTACACTTTGTTCTTCACCAATAAGGAATTATAAGAATTCCTAGTGCAGAACCAAACAGACTGAGAGTA TTCAATGCTATCAACAAAATAAACTCAACCTGGACTAGCCTTCCAATCACTTCCTCCCTACTAATTGCCTCCTGCTGATT CTCATACAAACCGGCATCTTGCAAGTACT
CDS sequence (LotjaGi4g1v0447200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAGGGTGGTGATGATGACGAAACCCAGAAGCACAACAACAACAACAAAAAGCGCAAACTAGTTTTCCCTTACGG CAACTACAAGACTTACTACGGCTATCGACTTGCTCAAGGCATGGATGAAGATCCTCGCTTGAAAGTGTTGAGGAAAGAGT GGTTTCAAGGCAAAGACTGTCTTGATATTGGCTGCAACAATGGGTTAATCACCATCCAGATTGCTCACAAGTTTCACTGC CGGACCATTCTTGGAATTGACATTGACTCTGATCGAGTTCAGGATGCATATTGGAATCTGAGAAAAACAGCTAGATCCAA ATCTGCCCCTGCGAAAGCCTCCAAACTTGAGGACAAGGACCATTCAGAGAACAATGTTGCGGTGGTGTCTAATGCCGATA CAGATGAGACTTCAAAAGAACCATCTTCTTCGGAGCAAATTGATCTGATGGATATAGTTTCATTTAAACGAGAGAATTTT GTTCAGAGTTGGCACCCACCCGGAAAGCACTATGATACAATTCTTTGTTTGAGTGTCTCAAAATGGATACATCTAAATTG GGGGGATGACGGTTTAATTACATTATTTTCAGAGACTTGGAAGCTGCTCAAACCTGGTGGCATTTTTGTGTTGGAACCTC AGCCATGGAATTCATATGTAAGCAATCGTGATGTCTCTGAGACCACCATTGCCAACTTCGGCAATATTATGTTTCGTCCA GAACAGTTTCAGGAAATACTGCTAGATAAGATTGGATTTAGAACAGTAGAAGATATCACTTCAGGGTTGACTGGTACCAA GGCTGGTTTCAATAGGCCAATTTTGGTTTTTCAGAAATGA
Protein sequence (LotjaGi4g1v0447200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKGGDDDETQKHNNNNKKRKLVFPYGNYKTYYGYRLAQGMDEDPRLKVLRKEWFQGKDCLDIGCNNGLITIQIAHKFHC RTILGIDIDSDRVQDAYWNLRKTARSKSAPAKASKLEDKDHSENNVAVVSNADTDETSKEPSSSEQIDLMDIVSFKRENF VQSWHPPGKHYDTILCLSVSKWIHLNWGDDGLITLFSETWKLLKPGGIFVLEPQPWNSYVSNRDVSETTIANFGNIMFRP EQFQEILLDKIGFRTVEDITSGLTGTKAGFNRPILVFQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| PANTHER | 8 | 279 | 272 | 1.5E-107 | ||
| PANTHER | 8 | 279 | 272 | 1.5E-107 | – | |
| ProSiteProfiles | 44 | 279 | 236 | 74.591 | ||
| SUPERFAMILY | 49 | 218 | 170 | 2.84E-20 | ||
| CDD | 61 | 212 | 152 | 3.73963E-5 | – | |
| MobiDBLite | 109 | 145 | 37 | - | – | |
| MobiDBLite | 125 | 145 | 21 | - | – | |
| Pfam | 171 | 279 | 109 | 1.1E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi4g1v0447200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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