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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0464400 |
| Transcript ID | LotjaGi4g1v0464400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nuclear localized protein, putative; TAIR: AT1G48580.2 nuclear localized protein; Swiss-Prot: sp|Q8N3J3|CQ053_HUMAN Uncharacterized protein C17orf53; TrEMBL-Plants: tr|G7LE63|G7LE63_MEDTR Nuclear localized protein, putative; Found in the gene: LotjaGi4g1v0464400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83444507..83450695) extracted from Lotus japonicus Gifu genome v1.2.
ATATAGAGCAATTTATTATTGAAGTTAATGCAGCTTATTTTGACACCTTTCATATTAAGATGATCTATAGCTAGAGATAC AAATTGGATGCAATGTATCTGATCCGTGTGAATAATTCAGCGTCTAGAAAATTAATAAGAGAGAGGTGAAGTACTTTCTC ATATGTTACGTATATATATAGAGTCAGCAACATGATTCAATGATACTCATGAGCAAAATACATGAGATTTGAGAGCAAGC TGAATCCCTACAGCTATAAACAAGGAATTAATCATGAGAAGAAAATGAATAAATAAATAAAACTCTTGCACGGAGGAATA TTGTGAATGAATGAATAACATAATCATGATACAGATAAACCCTTGGCACCAGGAAGATCAATCCACTGCAATTGGATTTC GACCTCACCGCATTCCACGTGTCGCAATCTGAGGACAACATCTTGGACAACTTTGCCATCGTTAACAGTGATGCAACTCT CCTCCGCCAAGCAGTTTGTCCTGCATGGTTGTATTCTGGTGACTATAGTGCCGCTTGGAAGACCTTCTAAATTCATCTTT AAGGCTTCTATAAATGGTGACAGGTCAAATTCTGCATCTCCCATTTTGTCATCTTTGCTAAATGTGTCATGATCATACAC AGTCTGCAATTAACTTCACACAATTAAGTACTAACCAATCATAATTAATTCTTTATGATCGATGAAGAAAAAGATGATAT AATATTTACCAATACAAATGGCTTAACAGGGTCTGTAATGGAAAGTGTAAGGTCTTCATTCCACTCAGGATTAATATCCT TATGAATCACACGAGTCTTGAGTTTCTGGCAAACAAAAAAAAAAACTATGATGCAGGTTCATTAATTAGAAAATAATTTA TGTGAAGGAATGAAAAAAAATTAATAATTATCAAAAAAAAGGAAAAACAATTAATTAAAGGGCGAACCTGCTTGCCCATC TTAACCACGACGTATGGATCACTGGTATTGACATCACGAACGGCGAGGTTGACACCACGCTTGATGCGAATCCTTAGAAG GCCGAGGATGTCTTCCATGAGGGACTTTGGTGGTGAATTTTGTATCGTTTCTCTATGTCTCCATCCCTTTCTTGTTAATA TGTTCAAAATAAATTTTGGTTTTACTTGAAGAAGCGAAAATGAAAAAAAAGACAACACATACATATCATGCATGCACAAT GATCAATGCTAGCTAGCTGCTTGTTAATCAAATGATATATAATTGAACTTGATCAGGAAAGTAACTAATAATTATATGCA TGGAGATGGAGTTAAAGGAGAAGGGTGTACGTACCAGAATTCAGTTATTCCAGATGATTTGGGGCAGGCTGCTTGAATCC TGAATTCCAAAGGGAGAGAGAGATTAATTATGTGAATGGTGCAGGGTTGGGTTGTTGGGTTTGTTGGGGGTTATGTTGGC AAAGAAAGACTAATATTTAATGTTTAGTAAATACTAAATAGATAGATAGAGATGAGAGGTGAATGAAAGATGTGGTTGAC AATCAATCAATGTGTTTGGCGCTAAATTATGCTCTTCGCCAACCACGTTCACCACCATCCAAATTTTTGGTAAGGTCAAC ACCATTCAAAACTATTACAATATATCAATCAAATTCATCAAGACATTCGTACTTTTATATATATTGAGTGAAAATTAATA TTTAAGTGCATGTTCAAAATAATGTGAGTCTATATAAATTAATATATGTATTGAAAGATATAATACATTAAGTGTATAAT CCTGAATATCAAACTGATCTTTTTCTCATATAAAGGTTAGTGTCTATATAAATTGACTCTTTATCTCAATTTTTTTTACC ATATGATTCTAAACTAATTAAATCCTGAAAAATCATATAAACACTACAAAACATCGATACTAAGCAATAGCTAGAAATCA TTGCTAAGTAGGTAAAAGCCAACACTAATATTGATTTAGCGTTGGCTTAGCTTGACATCAAACCAACATCCTAGCAGTTG TCATGTCATGTTCAAGGTGGCAAACCCTAAGAAGTTGGGCCTCGATTTGCTCGGTTACTCCAACCAAGCTCTGTCATAAC ACAAGCTTTTTCATGTCGCCCTTACGTCTCTTTCTCTCACTATGTAGTTTAGACCTTCATCGCGCCTACAAAGACACAAT CGCAACAAAAGCTCATCTTTGTGTCGTTTTACCCCACCATGACGCCATGCAAATCACCTTCCAAACCCCTACTCATCGAG CCCAATCCATCAGTCTCCGCGCTAAGGTGCCATTTTCCCACCGCAGTGCGCATCTGTGAGGATCACCACCTTTGTTGTTT AAGCACCTCAGATGAGATGACGAGGTGAAGCATTCCTTCATCGAACCGTGGATTGCTGCTTGGGGCTTTGACAATGTGAT TAGTTCGAGCCAGAGATAGTGGCTGGGTTATGAGACTAACTTTGGGGGGGGGGGGATGACGAAGACCATGGCCGAGGTTG ATTTTGGGGTTTCAAAGTGTCTAGTTCAGGTTGGTCATGAGGGGGACTGTTGGTGGCTAGCTCACTCTAGTTTGTGAATT GTGATGACTCTCTTTTACTTGGAAGGAAATTTACATGAGGTTGATGGAAAGAGAGGACAACAATGAGTATTCATTGATGA CTCAAGGACAACAGCCCCATTATTCGGGTTATGATAAAAAGGGGTGGAACACCATAACAGAAGAAGAAACATGTTTGGAA GTGTAAATTTGTAAAAAAGAAATGATATGTATTTGGTACATGTGATTTTTGGTAGGTAGAGTGTAAATAGGGCCGGGTTA AGGCCCAACAGAGCCCATGAACTCTGCAAAAAAGAAAAGAAAAAGAGAGGAGGTAAGAAGGTATCAAGTTCCCGCGCGAA GAAGAAGAATGGGTGATGAAGAAGAACCCTGGGAAGGTCTTGACATCGACGACTCCGATCTCTCCACCTTCCTCCGCCCT TGCAAACGCCACCGCAAATCTCCTCCTCTCATTCCCGGTCCCGCTGGCGCCGTCCAGGCCGCCATGATTCACCGCAGATC CTCCGCCGACCAACCCCTCCTTCCCACTCAAGAATTCGTCAGGCGCGTTCTCCAAAACGGCCACGACACCGATCCCGATT TCCTCTCCAATTCCTGGGTTTGTGCCTTGCAATTTGTTGCGTCCGCTACCCCTCTGGGCTCTATCAAGAAGCATCGAAGA GTTGCTCAGGTCGCCGCTGTTGTCAAATCCTGCAATCCCAATGGTTTCGGAGACATGACGGTTACCCTCAAGGTCTGTAA CAATACATACATTGTGTTTTCCTGTTTCATTTATTTGTTATAATTGCTATCTATTAACAACAATGTATAAATCCATCTAT CTGAGTTTGAATTTCAGGATCCTACCGGCACTGTTGGTGCTAGTATCCATCGTAAGGTCTTCACTGAAAGCCAATTTGGA AAAGACATAACTGTTGGTTCTGTTCTGCTTCTCCAAAAGGTAATGTTTCTCTCTCTCTCTCTCTTCTTATTTTGAACATC CTTTGCTTGAATTCAATTCTTTACTTTGCAGGTTGCTGTGTTTTCTCCTTCACGCTCTACTTGTTATCTCAATATAACAT TGCCCAACATACTCAAGGTATGCCAAGCTTTTTCACCCATCTTAAATCAAGACACTTGTACTGTATAACTTCCCAATCTT TTTTATTTTTAATTTGACAATTTCACATTGTGAGTGTGGATTTACTGAGTTCTGAATACTAAGAATTTGCTCATATGCTG CCATTTTTGTTTCACATTTCATTTTTTCTTCATTATCTTCCAGGAAGAGAGTTATTTTTCAGCTTATAGAATTTGTTTGT AAACAAGCCTTAATAAGTTGAATTGAATGTATGCAGTCTATATCATTCGCTTTTCTAATTAGAAACTCCTATATTGCATT AATCAATAATCATGGACCAATCCCTATTTTCATTTCCTTGATTGATAGATGAATGAGATCTATTTGTATGTTTCTTGTTG GCAAATTTTTGTGTTCTCATGGCTTGTTTATGTTATACAGGTCTTTTCAAAGGACAGTGGACCTCCATCAGGACAGGTTT ATCCTGCAAGCTCAGACAACCACACTGCATCTGGACTAGGTAGATATTTATAATGCATGTATAGCAGGAATTTGGTTTAA GTTCTTTTATTTAGATTTGTTGCCTTAATTGGCAAATTTTATGCCCAATTAACAATACTTAATTCTTGAAATCCGTATAT GCTCAATAGTTGGCTTTCTTTGGCAAACAGGAAGACATGAAAAGTCAGGCAGTACATTCTCTCTGCCACAGGAAAGGACT GGAGGAACCATGACTAAATCAAGTTTTAGACAAGAAGCAGATGTTGGTAAACAATGGGATGAAATTTTGGTGTTAACTAG TTCTGACTCTGACAATGGTACTGATCGAAACAAAAGAACTGCTATGGATAGAGAGAACTTACCATTGAGTGAGGACTCTT CTAGACCTGTCGAAGTGACCCATGGTAGCGAACTTGAAGGTGAGATGGAAGACCAATCCAACCCTCCTAAATTGTGTGAA GGAAACAATCTTGCGGGGGTTGCACCAGGTGGTATTTCATCAACAAGCTCGGTTCATACATCTGATAGTCAACAATCTGT AATAAAGAATCACTTGGGAAGTCAGAAGGAGATTGCAAATCCAAAAGGTTCAATCCCTTACTGGACAGAGGAACAGCTTG ATGAGCTTTTAGCATTTGACTAAGGTTTAAGTTCTTTTTGTCAGAGCAAACCATAAGATTTCGTTCAAGAAGAAAAGAAC AAAGTATGAGATGATGCTGATATACCCAGTTTACACGTATCTTAGTGGGGCATTTTAGCTAATTACAATGGTGCACGTTT TCTGTAAATATTCATAGAATACATTCAGGTCTTTTTGGTGTATGGAATCAAATTTAGAATTTAGTTTTGGTGGAATTTAT TTGAGATGTATGCTAAAATTGAGATTTCAATTGAGTTTAGTTTCATGAAGTTGAAAAGTACATACTTGATATTCAATTCT CAATCAAAATCCGAGACATTCTGCTTGCTGATTGCATGAACATGGGGATAGCAGCTTGGCTGGTGCTTGTTTTTCATCCA TTCTGCATGCTCACTGAAGCATACATACCCAAAAATTGCTGTTACACTTCCGAGTATTTACTGGTTACAAATATTCGTCA GCCGTTGGTGGTGAAACAAGTTTTTTTATTTAGAAACAATGCTTGGGTACTTATTTTATCTGTTGGAATGTTCCTAACAT ATTTTGATTCACAAGGTACTGTATATCATGCAAAATCTTTAACGGACTAGTTATAACAATGAAGATTTGAGAAAGGTTGA ACCTTGAATATAACTTAGTTGCACAAAGAACAAGGCATCATCACAATATTATTGTAATCATCACAATATTATTGTAAATT GTCAGCAAAATAATCCATTAGTGATCATAACATTACTATGTTTCACTAAATTCATCTTTAAAAGATACGCAATGATCACC TAAGTTTGTCAATATAGAGAACTAGAGTGATGACAATAAAAATAATTGGTGATAACTATCTACTACTTAAGAGATTGAAT TGGTGAATTTTTTTGAGAATCAATGCATAAATGCTTCAATTTTTGATTGACCATAAGATGTCACTTCGACTGAAAAAAAA GGATTTAAACCTGTGAAGTACAATCTAGTCCACTTTTATGAGAAATGCACAGTTGAATACTGAGTATACGCCTCCCTTGA CACATCACGATCCTAATATATTTACCTCGAGCAAAATTGGGACTCATTCTCGCAATAACATGCTACTGTCCTGGAACCTG AAAAGCTTATGCAATACATGCTTTCTATGTCTAAAACTGATTACGTAGCCACGATGGACAAAAGAATCATTATCATTTGC AGAAACCAAACGTCATAACTCCACTACGATAATTGCAACTAGAAACTCATCAATCATCTCAGGGCATAAATTGGCCACCA GCGCCGCGATTCTGGGGTGTTCAGCTCAAATCTTGTGCTCACAGTTATGTACCTACTACTACCTACTGGAATAGCTTCCT CAACCTTTCAGCAGCAGTAGCTGCCCTTTTGTTGGTTGGCTCAAGTACCAGAGCATATGTAAAATCTGCAAAGCAAAATT TTTATTAGCCAAGGGAAAATCCTAAAATA
CDS sequence (LotjaGi4g1v0464400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTCTGCAAAAAAGAAAAGAAAAAGAGAGGAGGTAAGAAGGTATCAAGTTCCCGCGCGAAGAAGAAGAATGGGTGA TGAAGAAGAACCCTGGGAAGGTCTTGACATCGACGACTCCGATCTCTCCACCTTCCTCCGCCCTTGCAAACGCCACCGCA AATCTCCTCCTCTCATTCCCGGTCCCGCTGGCGCCGTCCAGGCCGCCATGATTCACCGCAGATCCTCCGCCGACCAACCC CTCCTTCCCACTCAAGAATTCGTCAGGCGCGTTCTCCAAAACGGCCACGACACCGATCCCGATTTCCTCTCCAATTCCTG GGTTTGTGCCTTGCAATTTGTTGCGTCCGCTACCCCTCTGGGCTCTATCAAGAAGCATCGAAGAGTTGCTCAGGTCGCCG CTGTTGTCAAATCCTGCAATCCCAATGGTTTCGGAGACATGACGGTTACCCTCAAGGATCCTACCGGCACTGTTGGTGCT AGTATCCATCGTAAGGTCTTCACTGAAAGCCAATTTGGAAAAGACATAACTGTTGGTTCTGTTCTGCTTCTCCAAAAGGT TGCTGTGTTTTCTCCTTCACGCTCTACTTGTTATCTCAATATAACATTGCCCAACATACTCAAGGTCTTTTCAAAGGACA GTGGACCTCCATCAGGACAGGTTTATCCTGCAAGCTCAGACAACCACACTGCATCTGGACTAGGAAGACATGAAAAGTCA GGCAGTACATTCTCTCTGCCACAGGAAAGGACTGGAGGAACCATGACTAAATCAAGTTTTAGACAAGAAGCAGATGTTGG TAAACAATGGGATGAAATTTTGGTGTTAACTAGTTCTGACTCTGACAATGGTACTGATCGAAACAAAAGAACTGCTATGG ATAGAGAGAACTTACCATTGAGTGAGGACTCTTCTAGACCTGTCGAAGTGACCCATGGTAGCGAACTTGAAGGTGAGATG GAAGACCAATCCAACCCTCCTAAATTGTGTGAAGGAAACAATCTTGCGGGGGTTGCACCAGGTGGTATTTCATCAACAAG CTCGGTTCATACATCTGATAGTCAACAATCTGTAATAAAGAATCACTTGGGAAGTCAGAAGGAGATTGCAAATCCAAAAG GTTCAATCCCTTACTGGACAGAGGAACAGCTTGATGAGCTTTTAGCATTTGACTAA
Protein sequence (LotjaGi4g1v0464400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSAKKKRKREEVRRYQVPARRRRMGDEEEPWEGLDIDDSDLSTFLRPCKRHRKSPPLIPGPAGAVQAAMIHRRSSADQP LLPTQEFVRRVLQNGHDTDPDFLSNSWVCALQFVASATPLGSIKKHRRVAQVAAVVKSCNPNGFGDMTVTLKDPTGTVGA SIHRKVFTESQFGKDITVGSVLLLQKVAVFSPSRSTCYLNITLPNILKVFSKDSGPPSGQVYPASSDNHTASGLGRHEKS GSTFSLPQERTGGTMTKSSFRQEADVGKQWDEILVLTSSDSDNGTDRNKRTAMDRENLPLSEDSSRPVEVTHGSELEGEM EDQSNPPKLCEGNNLAGVAPGGISSTSSVHTSDSQQSVIKNHLGSQKEIANPKGSIPYWTEEQLDELLAFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | - | – | |
| MobiDBLite | 13 | 30 | 18 | - | – | |
| PANTHER | 54 | 391 | 338 | 3.4E-78 | ||
| Pfam | 128 | 212 | 85 | 2.1E-32 | ||
| MobiDBLite | 217 | 264 | 48 | - | – | |
| MobiDBLite | 218 | 263 | 46 | - | – | |
| MobiDBLite | 277 | 325 | 49 | - | – | |
| MobiDBLite | 283 | 324 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0464400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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