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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0466100 |
| Transcript ID | LotjaGi4g1v0466100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BnaA04g08550D protein; TAIR: AT2G25720.1 hypothetical protein; Swiss-Prot: sp|Q27705|PFP_NAEFO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase; TrEMBL-Plants: tr|I3T944|I3T944_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0466100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83673076..83674616) extracted from Lotus japonicus Gifu genome v1.2.
AGAAAAAACAGCTTATATTTTTCTCAAAATCTCAAAAAAAAAAAAATCCAGATAAATCGGAAAAGACATTAATCGCTTTT CTTTAAAGAGGGTTAGCGGAGCGGCGTGGGGAGATTGTGTTTGGGAATCAAATCAAGGATGTCGGATCCATACGAGCGGG TGAAAGGAGGAAGATTAGCATTCAAAGGAGGAACCCTGGCCACTCGCACCGATAATCCTAAGAAGAGAAAGAAAGGGAAG AAGAAGAAGGACAAGAACCCTAACGACGAAGACGAAACCCTGATAGTCATAGATAAACAGGGTGATGGATCCGAATCAGC AGCAGCAGCAGCAGCAGAAGGGGAAGAGGAAGAGGCGTACACGATTGATGCGGCGAAGCGAATGAAATACGAACAACTCT TCCCGGTTGAAGCCAAGAAGTTCGGTTACGAACCCAAAACCAAAACCAAAACCAACTCCAAGTCCGTTGAGGAGGCCCTC GATGATCGCGTCAAGAAGAAGGCTGATCGTTACTGCAAATGAATTGTGAGCGAGTCTTGTTCTATTTCAATTATTTACCC ACTCACACTCACACTCACTTCTTCTTTTGTTTCATTTATTTTGGGGTTTCGCTTTCTTCATCACAAAACAATCTGTGGCG TGCCTTTCCTCAAAGTTTATTTGTTTGTTACCCGCCGCACCCATTGATAACACCATCCATTATCAGACTTACTCCTATTC ATAGTTGCCCTTGTGAGTTTTGTGTAGCTTAATATGCTGTTGATTGATGGTTTTATCATGTGTTTACTGTTAGGTTTTCA GCTATTGATAATTTAATTTATTTTGTTTGTAGTAGGTTGTGGTGCAATGGAGCAGTTGAGCATGCATCACCAACCATTTG CGGCCATTGTATTGTATTCTGCTTCATAATTTGGATACACTTTAGAGCTCTGAATATTTTGAAGGAATCAATGTTCTGAA TATGCTATAGTTTCATTCATCTCTGTCTCAGATGTAGTGATTAGCTCTCTTGACTTTTAATCTAATAATGTATCACTATC ACTTGCAGTATGTACAAATTAAAATTACGATGGAGGAACTAGTTTGGAGGTGTATGGTGAATTTGTTTCTTATTCAGGAT TGTAGGCAAATTAGTAGACTTTCATAATTTCTCTGTTAGAAGGTAACGCAATGTAGCACAGCCCATTCTCTTGCTAAATT TGCTTTGGTCTCTCCTGATCATATCTGGATTGAAGAGGTTATTTATTGTATTCAAACTGATGTTACTTCGGATATGCTTC CATCCTTTTCTTATTAATGAAATCAGTGTTTTGCTGTAAAAAAATTACGATGGAGGAACAAGAAAGTTTCGTGAGAGCGA CCCGTTGGAGTGGGTATGCGGCATGACGATAATAACTTGTGCGAATTAGATGACATGACAATGTCAAGTAGATTATTGTG TCTATCTTTCACTTTATAAATATTTTAGGATCTCACATATTAGTACATATAAAGAGACAGATAGTTACGAAAGTTTTACA TAATAGTACATGAGAATATAA
CDS sequence (LotjaGi4g1v0466100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGATCCATACGAGCGGGTGAAAGGAGGAAGATTAGCATTCAAAGGAGGAACCCTGGCCACTCGCACCGATAATCC TAAGAAGAGAAAGAAAGGGAAGAAGAAGAAGGACAAGAACCCTAACGACGAAGACGAAACCCTGATAGTCATAGATAAAC AGGGTGATGGATCCGAATCAGCAGCAGCAGCAGCAGCAGAAGGGGAAGAGGAAGAGGCGTACACGATTGATGCGGCGAAG CGAATGAAATACGAACAACTCTTCCCGGTTGAAGCCAAGAAGTTCGGTTACGAACCCAAAACCAAAACCAAAACCAACTC CAAGTCCGTTGAGGAGGCCCTCGATGATCGCGTCAAGAAGAAGGCTGATCGTTACTGCAAATGA
Protein sequence (LotjaGi4g1v0466100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDPYERVKGGRLAFKGGTLATRTDNPKKRKKGKKKKDKNPNDEDETLIVIDKQGDGSESAAAAAAEGEEEEAYTIDAAK RMKYEQLFPVEAKKFGYEPKTKTKTNSKSVEEALDDRVKKKADRYCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| PANTHER | 1 | 127 | 127 | 7.0E-42 | – | |
| PANTHER | 1 | 127 | 127 | 7.0E-42 | ||
| MobiDBLite | 37 | 52 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0466100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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