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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0013100 |
Transcript ID | LotjaGi5g1v0013100.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Carboxyl methyltransferase; TAIR: AT1G19640.1 jasmonic acid carboxyl methyltransferase; Swiss-Prot: sp|Q9AR07|JMT_ARATH Jasmonate O-methyltransferase; TrEMBL-Plants: tr|A0A072VED2|A0A072VED2_MEDTR Salicylic acid carboxyl methyltransferase; Found in the gene: LotjaGi5g1v0013100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2889498..2892106) extracted from Lotus japonicus Gifu genome v1.2.
TATGTGACAAATCCAGCAACAAAGAAAGCTATCGTGGAGATTCTATGCTCAAGTAGGCCAATGAGGATGGGCATTGCAGA CTTGGGTTGCTCCTCTGGACCCAATGCCTTGAGAGTCATTTCAGAGATAGTGGATGTTGTTCATGCCAACTCACGCGTGT TAGATTGCCCAGTACCTGAGTTGGTAGTGCATTTGAATGACCTCTTCACCAATGACTTCAACACTGTCTTTGATTCATTG CCATCTTTCTACAAAACACAGAGGCAAGAAAAAGGAAATGAGTTTGGGTCGACATGTTTTGTTTCAGCTGTCCCGGGTAG TTTCTATGGTAGGCTCTTCCCAAGCAAGAGCCTCCACTTAGTGCACTCTTCTTCTAGCCTCCATTGGCTTTCTCAGGTGA GATAACCCAAAATTATATGGACAATTAATGCTAACAAGTCTAATTCAGGAATAAAAATAGAAAATTATTATTAGAAGTGA AACTTAAAATATTAATATAGTGTATTGAATTTTGAATTCAAGAATTTCTTAACTAGCTTACAAAGACCCAAATTATTATG GTTTTTTTTTATCAGCAAATTGATATATGTATTAATAATGAAATGGGTGCACTAGGGGTGCCCAAATTATTATGGTAAGA AGATGGATGTTCGGACTCAAACAAAGTTATTTCTAATAAAATATCATTGTAACAATTATGAAAAACCCAAATTATTACTG TCTTCATTTTAAAACTTTTTTTCAAATTTTATCATTTTAAGATCTTTAAGACTTAATTTAGTTATAATCATTTCATAGGA TTTTTATTATTATATTTGTCATTTGCCATCTATTTTTTATTTGTATCATTCTCTTCATCAATCACATTTTTCTTTCTCAT TCTTAACATAATACATTCTATAATATAAATTCTACTACTCTTCTTAAAAAGTGAGACAATAATAAGCTATACTCGAAAAT CTATGTGTTGTATTATTTGAACTACGTCATAATACTTCAAAATAAAAAAATAAAGGAAAGCTAGAAAAATGTTTTAGTTT CCAATGTGCATCTTGCAATAAAGCAACAGGTTCAATATATACTTTAACATTTCTCGTAATTCAAAATCCTAATCATTGTG GAACTTCTTCAAGATATTTCATTGACCTCTTGTTCATTTACCATACTATATATGTGAGACTAGTATATTCCACATATCAT GAAAGACTACGCTTTATTCGGATCTAAATCACAATTCAAAATACCAAGCTTTCTCTATAAAACAAATTTCTAATTTGAAA GGGGACAAATAATTTTTTTTTACATGTTTATAATAATGTTCTGAAGAAACTTAGCATTGAAAGGGACATATCATTGGTAA AACAAACAAGAATGGCTGTTCGGAAAAGATAAGGAAACAAAGTGGAACAAAAATACACATAGGATGTTCTAGTGGAACAA GGAAATGAAGACAACATACTTTACCAATGGAAATATTGTCAGGCTTTTTGGATTGAACTAATCATCAATATTGTCTCGTC TGTCTCGTGTAATATTGCCAGGCTCCTTTGGATTTGAAGGATGGTTGGGGGAGAGGACTGAACAAGGGAAAGATCTACAT TTCAAAGAGTAGTCCCCAGTGTGTGTTAGATGCTTATTTACGTCAATTCCAAAATGACTTTTCACTGTTCCTGCAATCAC GTTCTCAAGAGATAGTTGCAGGAGGATACATGGTTGTTGTCTCTTATGGGAAGGCAATCCATGGACCCAACAACGCCCCA TTGTTGCTACCAGTGGGAATTGTTAGCCCAGGCTCTCATGAGCATGGTTTCAGAGGTACGCATTTAATTCCAATTCATTT AGCATGTTTAATGGATTTATATATCTTTTAGAGATTAATTTCTATACGATTGAATGACTTTGTAAAACTTTTTACATCGT TAGTGCATATAAATTAATTACCATTTTTTATTAGAATCAGTTTTAAAATTTAGAATAAACTCATAAAAGCTTCACTCAAA ATTGGCTATAGCTTCATAATTTTTTTTTTAACGAAGCATAACTCAAGTAGTAAGAGTTAGGGGACATATAAATTAGGGTA GGAGATGTCTAAAGATCAATCCCCGAAGAGTGTAATTTATATTTTCGATGTATCGAAAAAAACATTAATAACGACATTCT AACATGTATCACTTTTATCTTCTCCTCTTACCATAATATATTACTATATCATATAACATTTATCACTTTTATTTGTGATA CCTAGGGTCTTGTGGAAGAGAAAAAATTGGACTCTTTTGATGCTCCTTACTACGCACCATGCATAGAGGAAATGAAATTA GAGATTGAAAAGGAAGGTTCATTCATGGTAGTTTGTCATGAAGCTTATGAAATTAACTGGGATGCTGGAATGGAACAGCA AAGTGATTCAACATCAAGTGGCGAACTAGTTGCAAGGACCATAAGGGCTGTGGTTGAATCCATGTTGGAATTTCATTTTG GGAGTCATATAATAGATGAGGTGTTTCGAAGATATGCCAAACTTGTGGAGGAACATTTGTCCAAAAATAGGACCAAATAC ATCAATTTGGTCATTTCTCTTGTCAAGCGAAATTGAAATACAAGCAACA
CDS sequence (LotjaGi5g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGGCAATCCATGGACCCAACAACGCCCCATTGTTGCTACCAGTGGGAATTGTTAGCCCAGGCTCTCATGAGCAT GGTTTCAGAGGGTCTTGTGGAAGAGAAAAAATTGGACTCTTTTGATGCTCCTTACTACGCACCATGCATAGAGGAAATGA AATTAGAGATTGAAAAGGAAGGTTCATTCATGGTAGTTTGTCATGAAGCTTATGAAATTAACTGGGATGCTGGAATGGAA CAGCAAAGTGATTCAACATCAAGTGGCGAACTAGTTGCAAGGACCATAAGGGCTGTGGTTGAATCCATGTTGGAATTTCA TTTTGGGAGTCATATAATAGATGAGGTGTTTCGAAGATATGCCAAACTTGTGGAGGAACATTTGTCCAAAAATAGGACCA AATACATCAATTTGGTCATTTCTCTTGTCAAGCGAAATTGA
Protein sequence (LotjaGi5g1v0013100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRQSMDPTTPHCCYQWELLAQALMSMVSEGLVEEKKLDSFDAPYYAPCIEEMKLEIEKEGSFMVVCHEAYEINWDAGME QQSDSTSSGELVARTIRAVVESMLEFHFGSHIIDEVFRRYAKLVEEHLSKNRTKYINLVISLVKRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 74 | 74 | 2.0E-39 | – | |
PANTHER | 1 | 144 | 144 | 2.6E-53 | – | |
Pfam | 1 | 144 | 144 | 2.8E-41 | ||
PANTHER | 1 | 144 | 144 | 2.6E-53 | ||
SUPERFAMILY | 1 | 145 | 145 | 3.99E-37 | ||
Gene3D | 5 | 129 | 125 | 2.0E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0013100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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