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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0017700 |
| Transcript ID | LotjaGi5g1v0017700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Outer envelope pore protein 24B, chloroplastic; TAIR: AT5G42960.1 outer envelope pore 24B-like protein; Swiss-Prot: sp|O49929|OEP24_PEA Outer envelope pore protein 24, chloroplastic; TrEMBL-Plants: tr|I1M8E3|I1M8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0017700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3501041..3504470) extracted from Lotus japonicus Gifu genome v1.2.
GTCACTATTTATTTTAGCATTTGAAAACCCTTTCATTTCACCAAACACACATTTCCATATTCTCAGCCGCTCGCTCACTC CCTCCGTGGTTTACAATGAAGGCTGCTTTGAAGGGCAGGTACGACATCGACAAAAACGGTGGCGCAGCCGCTACCCTCGC CGTCAACGCCGGCGACGTCAAGCTCAGAGCCTCCATAACCGACGCCACTTTCATCAACGGCCCCAGCTTAACCGGTTTGG TCCTCGCCGTAGAGAAACCTGGTTCCTTCATAATCGACTACAATGTCCCCAAAAAGGTAAACACTACACTCACTCACCTC AAATTCCCCGAAGAAACAACCTTAATCTCCGTTACCTCGTACTGAACAAACCCTTTTCGTTGTTTTTCTTCTGGCGGCGC AGGACCTTCGGTTTCAGTTCATGAACACTGTTAGGGTTGCTGAGAAGCCGTTGAATTTGACTTACATTCACAGCAAGGCT GATAACAGGACCATTTTGGACGGAACGTTGGTGTTCGACGCTGCCAACAAGGTTTCTGCGAATTATGCTCTTGATTCGGG GAATTGCAGGTTGAAGTATAGGTATGTGCACAAGGGTTTGACCACGTTTGAACCTTCCTATGATGTTGCTAAGAACACGT GGGACTTCGCGGTTTCGAGGAGGGTTTATGGTGATGACTCGTTTGGAGCATCTTACAAGACATCCAGCAAGGTGTTGGGG TTGGAGTGGTCGCGGAATTCCAAACAAACTGGTTGCTTCAAGGTGAATGAATACACACCATGTTAATTAAGAACTTTCTG GGGATTTTAGTTGCTGTTTAACCAGTAATTTTTTGTGAATTTTGATATTTGACATGTGTGGTGGAGTTTATGTTTGAAAT TAGTGTTTTAAATTGTGATTTAGAACTGCAATTGCAGCTCTAATACTATGGTATTGTTTGGAAGTTTTTGCAATTGCAGT GGTTATCGCGTTTATCTGCAATTGTCTGTGATGATGATAGAAGCTTCGCTTCAATTCACTTCTATTGGGCTTGACTCCTC CACACATGGATGAAAATACATCTGATTCATTAGGCAGTTTTTTTTGTAGTTCAGTCTTATTTATGTTTCTACAATAGCAT GTGAAATAGGAGAGAATTTGTGTCACTTGTGTGGCTCTCCTCCACTTTAGGTTTTTTTTTTGTGCCTTAGACATACTATA TATTTTATTTCGGACCTTGATGAAAAGGTAATTGATGTTATTTGTTTTCGTTCTTATTTTAGCTATGCTTCTTAAATTAG AAATTAGGATTCTTGATAGAGTGGAGGTATGAGAACCTGATGCATCAATTGATAGAGTGACTCACCCTATTAAGCAAGAA CCCTAATTTCTAAACTAAGAAGCAGTGTTCAAATATGAAGAAAGACAAATAACATCAATCTTCAGATACCTTTTCATTAA CATGAGAAATAAAATGTAAACTACAGTTAAGTAAAAAGTTCTGAAATGAGGGAGAACCACACAAGTGACACAATCCTATT TCATGGGCTATTTCAGAAACAATAATTAAAATGGAAATAAGATTGAATTATAAAAATAAACCTCATAATGGAGGAGTCAT AATAAAGGAGTCAAGACTGAAGCTTCTATCAGATGACTGTGACAGCAATTCAGAACCTCTGACGTGATATCTATGCTTTT GTATGTAGCTTGAATTGATATGTGAGGATGAAATTTGTGAAGCTTGTGTTGTATATATTTAGTCTCTTTCTTGGTAAGCT TGAAATTTGGACATTCATGGAGGGAGTGTTAGTTAATGCATTGGACTAAGATGGTTGCTGGAGTCGTGTTACTGGTTTTA AGATTTCAACAGTTAACCTCTTTTTTGACTCTGGTAATCTGGTTAGATTGTCGTTAAGTAACACTTCAATTATATGCTTA GATGATTAATGGATTTGGGGTCATGTGAGTTTACTAGAAGATTCATTCTTTGAAAAAGAAGCTTCAAGGGCTTGCAATCT GAAAGTTTACTGATGATTTACTGTCTTTAACGTAAGAATAGTGACCGCCCTGAGTGAGGATACAGCCCTTCCTCTTGATA AGGGAATTCATTTTGCGAAAGTAAAGCCAGTAATTTTTTATGAAGTTGGTCATCTTGGAGGAGGCACAAACTGCTGTCTC TTGGGTTTAAGAAGAGAAGCATGTGCAAGTGAAGGCTGTATCAAATTATTTTTGTAAGCTCATAAGATAAAGTTGTGTTC TTGAATGAATAAGAGTTTGTTAAAGAAGGTTTGAAATAGGTGCTAACATGTTTCTTCTTTTTTAAACATACCATGAAGCA GCTAATACTTGATTTGCTGCCTTGATTTTTTCCTCATTTCTTTATACATTATTACCCTTAACCTTAATTAGACTCGATGT TGGGCGTGTTACACCGTAAGGTTTTTTTCCCCCCTGGTATAGTTTGAGTTATAATGAGTAGGTCAGTGCTGTGGTTTCTC TTTCTGTCAAACAATATTTTGAAGAGTACAGACTTGGGCAAATCTTGGAACTTAGAACTGTTTCTAATACAACTTATAGA TGCCTTGTCTGTTTTCCTATTTGAAACTCAACTAGTGCAGGTTTATCTTTTGGAGATGCTTATATAATCTTTATTCTTGC ATGAAATTTGAGAATCTAACTTTGAGCACTGCCTTTCAGATTGTGGCGTCCGTTAACTTGGCTGAGGAAGCAAAAATTCC CAAACTTAGTGCTGAGACCACCTGGAATTTTGAGATGTAGATTGCTGCTTCCTATATCTTTTCTCAATTGCAGGACAGGT TTGCTATCTTTAGTGGCTTTTGCTATCACCATTGGGGGGCATAGTTTTCTTTTGAGAATTGTATACTTGAAAGTGATTTA ATCATGTTTTAATGTGCTACTCTCTGGCGTTGATCGTCCACTTACAACTTTCCGTTTGATTCTTCAACAATTCTGGTACT TCCCCCACATTGCAAAAGCATGTAATTGCTTGCCTATTGGGCAGTCACCTCTATTCTCATAAAGTTATTCTATTCTTTAT TTACTTTTCTTTTTGCGATAGATGCCGACGAGGATGATTGGTAGCATGTTTGAATCAGTTCCTCTTTTCTCATAATCAAT TATGACACCTGGAAGCTACTCTTCCTATAATTGATTTTGGCTTCAGAATCAATTGTTTAAGGATTTTCATACATGTCAGG GAAGGATTATATTGTTATGCTTGGAAACATGATTTCATTGTAATTTCCAAGTTGTGCTGACAAATTGTTTGGAACTGGAA ACCTAATATACACTTAGGCCCGTTTGGAAGAGCTTATTTGAGCTTATTTGATAGCATAAGCTCTTATGCCAGTGTTTGAG AGAGCTTATGCAAATAGCTTATGACCTATCATAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCATGAT
CDS sequence (LotjaGi5g1v0017700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCTGCTTTGAAGGGCAGGTACGACATCGACAAAAACGGTGGCGCAGCCGCTACCCTCGCCGTCAACGCCGGCGA CGTCAAGCTCAGAGCCTCCATAACCGACGCCACTTTCATCAACGGCCCCAGCTTAACCGGTTTGGTCCTCGCCGTAGAGA AACCTGGTTCCTTCATAATCGACTACAATGTCCCCAAAAAGGACCTTCGGTTTCAGTTCATGAACACTGTTAGGGTTGCT GAGAAGCCGTTGAATTTGACTTACATTCACAGCAAGGCTGATAACAGGACCATTTTGGACGGAACGTTGGTGTTCGACGC TGCCAACAAGGTTTCTGCGAATTATGCTCTTGATTCGGGGAATTGCAGGTTGAAGTATAGGTATGTGCACAAGGGTTTGA CCACGTTTGAACCTTCCTATGATGTTGCTAAGAACACGTGGGACTTCGCGGTTTCGAGGAGGGTTTATGGTGATGACTCG TTTGGAGCATCTTACAAGACATCCAGCAAGGTGTTGGGGTTGGAGTGGTCGCGGAATTCCAAACAAACTGGTTGCTTCAA GATTGTGGCGTCCGTTAACTTGGCTGAGGAAGCAAAAATTCCCAAACTTAGTGCTGAGACCACCTGGAATTTTGAGATGT AG
Protein sequence (LotjaGi5g1v0017700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKAALKGRYDIDKNGGAAATLAVNAGDVKLRASITDATFINGPSLTGLVLAVEKPGSFIIDYNVPKKDLRFQFMNTVRVA EKPLNLTYIHSKADNRTILDGTLVFDAANKVSANYALDSGNCRLKYRYVHKGLTTFEPSYDVAKNTWDFAVSRRVYGDDS FGASYKTSSKVLGLEWSRNSKQTGCFKIVASVNLAEEAKIPKLSAETTWNFEM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 213 | 213 | 4.0E-106 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated cation channel activity | Enables the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Biological process | Regulation of ion transmembrane transport | Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0017700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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