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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0040900 |
| Transcript ID | LotjaGi5g1v0040900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT2G26040.1 PYR1-like 2; Swiss-Prot: sp|O80992|PYL2_ARATH Abscisic acid receptor PYL2; TrEMBL-Plants: tr|I1M912|I1M912_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0040900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6866366..6869464) extracted from Lotus japonicus Gifu genome v1.2.
CCACCATTGATCTTCACATATATAAATAATTATATGGTGTGCACCTCCTTCATTTCAGCTATTTCTCCTTCCACAACACC CTCTTGCCTCCACCATTTTCTTCCTCTTTTTCTTCTGTATCCTTGCACAACAAACCAACCCAATCTCTTTAGTGCAAAAC ACACACACACAGATTCACAAAATGTCCCCAGAAGTGCAGGGTCTAACTCCAGAAGAATTCACAGAAGTCGAACCAATCAT AAAAAAATACCACATCTTCGAGCCTACACCAAACGCCTGCACCTCCATCATAACCTACCGAATCGATGCTCCAGCAAACA GGGTGTGGCCATTCGTGAGAAGCTTCGAGAATCCTCAGAAGTACAAGCACTTCATCAAAGGCTGCAACATGCAAGGTGAC GGTGGCGTCGGTAGCATTAGAGAAGTCACCGTCGTCTCGGGCCTCCCGGCGTCAACCAGCACCGAGAGGCTCGAGATTCT CGATGATGACAAGCACGTGCTCAGCTTCAGGGTCGTCGGCGGCGAGCACCGGCTCCAAAACTACCGTTCTGTGACGTCGG TGAATGAGTTTTGTTCAAGTGAGGGGAAGGTTTACACGTTGGTGTTGGAGTCTTATATAGTGGACATACCGGATGGGAAC ACGGCGGAAGACACTAAGATGTTTGTTGACACGGTGGTGAAGCTCAACCTTCAGAAACTAGGGGTGGTGGCGATGGCGGC AACGTCAATGCAAGGACAATAATGAATGTTTTGGGGATTTGGATTCATGCAGTCAGGTAATCTTAAATTTAGACGTGTTT AAATTTTGACCGTATGAATTTAGGTGTTTCCTGACTACAAAGAATTTAAATCCAGGTACTAATCTGATTATTGTGTGGAC TCAGATTTGTTATTTAGAGACAGTTGAGTTTGAGTTCATGGATGGTATGGTATTTAGTTAGTTAATTAATGCATGGTTAG TTCCATTTGCAATTGATCTACATTGTTTCTTCTTTCTTTCTCAATATTCGTCATAGAATGATGATAATAATATATATATA TAGTTAATTATTTTATCATTACTATCTTTAGTTAGTTGAAATTTGACTTGTTTATATATATTCGGATTAATTATATTTCA TATATAGACCAATTATGGTCATGATGATCATTAGGCTTTGTGGAAGCGTTCTCGTCTTTGGTAAAAAAATTGTTGATGTC TTTGAGGGGTGATGAAGTAAAGAAACAATAATGTATGTCAGTAATGCGTTCGCAGGCATACAAGTGGATACATTTTCTTT AATTTTTATTTCCAGGGAAATTGTTGGTTAGAGGTATCGGTTAGAGAAAAATATGAAAGATATGATTCAAAAATGAAGGT AGTTAGAGAGAAAAATGAGCTATGATGAAAAATGGTCGTCACAAAGTGCAAGTTGAGGCAATATTTGACAATTGACATGA TTATCTGTCTACTTAGCTTGCAACCTGCTTTTTATTTTTGACGGGCTAACTTCTAACTTATTTAAACGGGCTTATATATA TATATATATATATATATATATATATATGTAGTTTTTTTGTTTTTGTACTTATTCTAATGGAAGACTATCCTTTTTTAGTG GAAAATATCTATATTATGGTGGAATTAAACCTAAAACTTATTAATGGGCCGGGAAATCAAACATATATAACTTAAACCAA CAAACAATCAATTAGTGAACTCTCTACATAGTTTGCCATAATACTGAGCTTTTGATCTTGTAATTTAATTAATCTTGGCA TGAAAAATCAAGTTGAAACAGGCAATTAAAGGGGGTGGTGGATGGTAGTTGAGTTGAAAGTGCATGATCCTCCTTTTGGT GCGGCTTGAATGTCAAACCCAAACTCAAATTAAAGGACAAAGAAACGTGAAAATCTCGTGACCATTACCTTGAGGAACAT GTGATCGAGTGTGAAAGCTAGCAGCATTATCATTAATTATGAGTAGAAAAGAAAAGAAGAGAGCACACCGTCACCACACA TACACAACAGTGAGCGAGAGAGCGTGACCATTTTCTTTCTTCCAAGATAATTTTCTTTTTCTAAGGCGGCGCTACGCAAC ATATATATGTATAAAAAAGCAGTAGTAAATAGATTCGGCTTTTTTTAATTGGCCAACATAATGATACAGTTTCTAACTTT TATTTTCTGCTTTCTCATTGTGTGGTTTCAATTCCACAGATTTTGCCGGTTATTTTATCCACAATTTCACAAATCCCAGT GCATGAGTTGTGAAAATCTTTTATGATTATTTAAGAGGTCTCGCTGCATGCTTGTGAACATAGCACGTAAAAGATAAATC TATTAGAAAGGTAAATGGTATGATTCATGGACCTCCCTCACCTAACTCATATATATGTCTCATAGCATTTATCATTTGAG TTATGCACTAAAATAATTTCACAATATAATTCATCTTTTATTTATTTAAGTGTCAACTTTCAAGTATTTTTTTTCTATTT ATCCATCCATCCACTAAGAATTTTAAAAGAGCATTAGTTTATGTTTTTACAAGTAATCTCTCGTAGGAATAATAAATGTG AAAAGATATAATACATTATAAATTAAAGATAAAAACTAAAAAGACAAACAAATTCCAAAAATTAGGAAAATTAATTGTAT TCTTTAATATTGTGTTTCTTCTCTTTTCGGACAGTTAATGAAAAATAGAGGAGGTAGTACTAATCATAACGACTTGTAGA GTTCAAAAAAAAAATTCATAACGACTTGTACGATTAGCATATGTATGAAGGGAAATGAAAGGATTTGTAGGTGAATAGTC AGGGTGAGTTCAAACCCTTAACTATTAACATTTGTCTATAAAAGAATAAAGTAAACTATTACGGGAGCCCATTATTATTC ATATTATATAATGATAAATTAATTATTTTAAAATTTATAAATAAATAATTTTATATTATTATTTCAAACATATATGTTGA TTAAATAGTTCATAAGATGATTTTTTCAGCTGACACGACCATCATCTCAATCTTCTTGTGTCATAGTTAAAGTTTCTTTT ATTGACTGCTTAATTTTTAGATGTTAAAGGTGAAGTTATAACTATTAATTAAAAAATCA
CDS sequence (LotjaGi5g1v0040900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCCCAGAAGTGCAGGGTCTAACTCCAGAAGAATTCACAGAAGTCGAACCAATCATAAAAAAATACCACATCTTCGA GCCTACACCAAACGCCTGCACCTCCATCATAACCTACCGAATCGATGCTCCAGCAAACAGGGTGTGGCCATTCGTGAGAA GCTTCGAGAATCCTCAGAAGTACAAGCACTTCATCAAAGGCTGCAACATGCAAGGTGACGGTGGCGTCGGTAGCATTAGA GAAGTCACCGTCGTCTCGGGCCTCCCGGCGTCAACCAGCACCGAGAGGCTCGAGATTCTCGATGATGACAAGCACGTGCT CAGCTTCAGGGTCGTCGGCGGCGAGCACCGGCTCCAAAACTACCGTTCTGTGACGTCGGTGAATGAGTTTTGTTCAAGTG AGGGGAAGGTTTACACGTTGGTGTTGGAGTCTTATATAGTGGACATACCGGATGGGAACACGGCGGAAGACACTAAGATG TTTGTTGACACGGTGGTGAAGCTCAACCTTCAGAAACTAGGGGTGGTGGCGATGGCGGCAACGTCAATGCAAGGACAATA A
Protein sequence (LotjaGi5g1v0040900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPEVQGLTPEEFTEVEPIIKKYHIFEPTPNACTSIITYRIDAPANRVWPFVRSFENPQKYKHFIKGCNMQGDGGVGSIR EVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLQNYRSVTSVNEFCSSEGKVYTLVLESYIVDIPDGNTAEDTKM FVDTVVKLNLQKLGVVAMAATSMQGQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 182 | 178 | 2.9E-81 | ||
| PANTHER | 10 | 181 | 172 | 1.7E-95 | – | |
| PANTHER | 10 | 181 | 172 | 1.7E-95 | – | |
| SUPERFAMILY | 33 | 174 | 142 | 2.13E-33 | – | |
| CDD | 40 | 173 | 134 | 2.79966E-32 | – | |
| Pfam | 40 | 173 | 134 | 4.5E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0040900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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