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LotjaGi5g1v0049100.1

Overview

Field Value
Gene ID LotjaGi5g1v0049100
Transcript ID LotjaGi5g1v0049100.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein BUD31; TAIR: AT4G21110.1 G10 family protein; Swiss-Prot: sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2; TrEMBL-Plants: tr|C6SVT6|C6SVT6_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0049100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:8319442..8325113) extracted from Lotus japonicus Gifu genome v1.2.

TGAAACTCCTAAATTAAACGTCTCTGTTTCCAGCTTCCCACTCACTCGACTCGACCCTCAGTGCCCGAGTCCCTAATTCG TCTCCTCGCACAGCGCCACCGTCAAGAAGTCTTTCAACGACGGCGCCGCTTAACACGCCGGCGAAGCCTTTGACGGTGAT TCAATCCGTCGCCTCCACTGCTTCGTGAGTTCTTCACTGCATCTAGTAATTTTTCATCCCTTGTTTTTTCAATTGACCTA AATGTGATAATTGGAAAATTTTGATATGAACAGAGAAGAGAAAACCATAGTGGTGTTATTAATTTCACTCTAATTAGGAA GTGCTACTGGTATTGATTAAACCATAGTTCTTTGTTTAATACTGATTTTTCTTTCTGGAATATGTTGGTTTTATTTCAAT TTGCTTTGGAATTTATGTATATGCTGTATTCAAATGAATCGGAACATTCGATGATTCAAGTAATAGGCTATTTGTTAACT TAAGCTTAGCCTTTATGTGTTTGGTATGTTGATGGAAGTGATATCCTAGAGGGGTTTAGGAGTTGTGCTTGATTCTTCTT TCTATTGATTGAGGAAATAAATAACGAGGTTGAAGTGTGCGTAAGCAATAGTTAACTTTGCTGTCATGAAAATAACACCT TTCTTCTCCTTCTATATATCCATGTCCAAGAATTGTATCATGAAAAGGCCACCTTTAGGCCCTGCAGTAATCCTAACCGA TAAATTTTGGACTGGATTGGTCCTGACTCCTGACTTCAAAGAAAATCAAAACTTATTGGATGAATATGTGATTAGGCAGA AGGGATTGGATCGGATGGGCTTTTACCTGAAAAACAAACCATTCAGACTGCGAACACTCCTAGATCAAAGCTTATCTTGT GGTATCAAGAGATGCTTAGAGAAATGCTAACAACACCCTCTTTTGGACACTCTCTCAAACACTCACCCTATGGTTAGTTA AAATACACGTGGGTCCCATCACTTTGGAAATGAGACCCACTAATTTAGTGGGACCACATGAATTTTAACCAATCATAGAG TGAGTGTTTGAGAGTGTCCAAAAGAGAGTGTTGCTAGCATTTCTCATTTTATTATTGTGCCAATGACTTTTAACTTGTTT CGTCGGTGATTTTTCTATATCTTTGTTTATTAAGGATTCACTATACAGCTTGTATCTATTGAGTGTCATTTATATTGCTA GTTAAAATGTATGAAAATTTACCCTTCAATGTCACATTTTCCTTTGACAGGTGCAAAGATGCCTAAAGTAAAGACAAACC GTGTGAAATACCCAGAGGGATGGGAATTAATTGAGCCCACGCTCTGTGAACTACAAGCAAAGATGAGGGAAGGTTGGGAT ATTAGATGCTATGCTTGCCTTCCTTGCTATTTTCCCCCTTTTCTTTCTGTAATCTGTAAACATGATTTATTTTTTTTCAT ATCCTTTATGTGGCAGCTGAGAATGATCCACATGATGGCAAAAGAAAATGTGAGACTTTATGGCCTATATTTAAAATTGC ACACCAGAAGAGCCGCTACATATTTGACCTCTACCATCGGAGGAATGAAATTTCTAAAGAGTTGTATGAATTCTGTTTAG ATCAAGGATATGCTGACCGCAACCTGATTGCAAAATGGAAGAAGGTACTTATCATGAGTTATTAATTCTATTTTTTGGAG TGCTTTTGTTTTTCTATTTCCTTTTTCATTGGAGAATAAGTACAATCAGACTGAAGGTAAGAAATTTGCATCTGAGATGG TAACCCCTGAACCTTATACCTAGAAGAAGAGAACTTTAACTGTATCCCAAATAAACTTAGTGGGTGAAGAACCTCCTTCC GTGAGCTCGCCTCAAACTCTTTGAAAAGATTTTCTTTCTACTACCAGTTACATTATTACAACTATTTAGAATAAAGGCTT AACTGCACTTTTGGTCCCCCACTTTATTCAATCGTGTGATTTTGGTCCTTAACAAAATTTATTAGCACTTTGCGTCCCTC ACGTTAACTTTCGTTTGCACTTTTGGTTTTCCTTCCACTCCCATCCAATATTTAACGGTTTTTTGTTAAGAAATTAATTA AAAATAAAAAACAAAAACCTAAACCCAGAGATCCATAAAGTTCTTGAATATCTTCATCTTCTTCAAACATTCTTTTATCT TCCTCATCATGTTATTCATCTTCAAATCTGAAAATCCTTTCAACATCTACGATTCCACCTTCATCTACATAAAAAACAAA GGGAACAAAAGGAAAAGAAAAAGAACAAAACAAAAAAAACCCCAAATCCAAGAAACCCTAACACTAACCTAGAATCCCCA AATCCAGATTTGATCCATGCCCTTGTGCAATACGTGTTCACATAAGGCTTATAAAAAGAGGAAAAGAATTGTAGCACTCA GAACAAAGCTACAATCCCATCACACCCCACCTTTCAAGAAATGCAAACAGAGCACTCCAATGAGAAACCGAATTACAAAT TGAAGAACGAGTGCTCCCGGTGGCGGAGGATGTTGAAGAAGATTCGCAGTAGGTGGAGGAACTGCAAAGTCGAATCCCGA TGGGGAAATGGAGGAACCAATCAGATCTGGGTTTGGGGATTCTAGGGTAGGATTTGGATTTGAGCTGGTGACACTTTTGA TGTTTCTCTGTTGACAATTGAAGGGGTAATTTTCTGGGTTCTTCCTCTCATGATTTCTCTTTCGTGTTCCCATGGCGAGA GTAACACTTTGAATGCATGAAATTTGTGCGTTATGCATTTGGGGGATTAAGGGGTTTGGTTTGGGGGTGCTGATATAGCC ATATGGGTACTAATTTTTCCTCTTATGATGGGGATTTTGCTGCTTTGAAGCCATGGCTTGGGGACATATGTGAGGGTTGA TGGGTTTTTAGATGAAGATGATGAAAGAAGATGCTTGAAGAAGATGAATATTCATAATGTTCTGGGTTTTCATTTTCATT TTTATTTTTAATTAATTTTTTAACAAAAAAACTGTTAAATATTGGATGGAAGTGGACGGAAAATCAAAAGTGCAAACGAA AGTTAATGTGGGGGACGCAAAGTGCTAATAAATTTTGTTAAGGACCAAAATCGCATGATTGAATAAAGTGGGGGACTAAA AGTGCAATTAAGCCTAGAATAAACTAGAATTAGCATCTCCATGTGTTATGGGCCTGTTCCCAAGGCCCAAATTTTCTAAG GTTTATGTGCGGAGAAGGAAGAGGTGGGATGCACCAAATTGGACCACCGGCTGAGGTGGCATGGGCAAGAGGGACAAGTG AGGGGAGCGTGCTGGCTGAGTTGGAGGGAGAATATAACCGTGAGAGGGCAGGAAATCGGGTTAGGCTTGGGTTTAGCTGG AATTGGGAGAGAAGGGGCACTCTCGAAATTGCTTCTAGAGTTTAGTGCTTGATGCCTTTTTTTAGATGGAAATTGATTGC CTTTTCTTAGATAATAAACACTATAGCACCAGACATGCCTTTTAATGATACTTGTTTTATGCTTGCTTCATTTACTCTCC TTCAAAAAAAAAATCAGGGACATTTTGAAAATTATCTGGACTATGCTGCCGTGGTGTTAGTTTAATTTCTGGTATTCTTG ATTTAGTGCCTTAGTTTTGAGTTCATGGAAATTCGTTGAAGTATTGAAATAAAGGGATTGTTATCGGGATGTGAATATGT GTGGCTTGCATGTTATCATCATTGCTGCTTAAACATTCTTCTAAGTGACCTTTCCTGGCAAATAATATCAATAGGCCAAG GTTCAGTAACCTTTTTCTCCATGTACATATGCTGTGAATTGCATGTGTTGGAATGCAATGCATGTACAGTGTCGGACATT CAGTGTCCTGTTTCATATGTTGTAGTGGACATCATCTTCTAATTTGATTTAACTAGTTAAGGGAACTGTTGCCTTCCTTA CTTGAATTGTATTCGTATTCTAATAAAGATATAAATTAGGAATCTTGTTTTGAATTGTTACAGTATTAGAGAATGGTGAA ACATTTTACTGTCATTGTACTCATATGCTGTCTTGATCTGATATTGAAATTTAAAAAAGATGGATTGATGATTGCTTTGT TGGTTTTGGTGTAACCTGATGCTGTGCTGGTTTTCTTTGTTTTCGTAACCAATGATCTTACTCTGATAATCTAAAACTGA GATTTAATCATGTATTACTGTTCAAGGAGAAATTGGTATTTAATGTTATTTGATGTACTTGTTCCAGCAGAACCTGTGTT ATCAAATAAGCATGACCCTAACCACAACCTGCCGGTACACTATAAGGTTTAGTTCTGAACCCAAGAACAAGAGAGAAGCT CTCACAAATGGAGAAAACTCAATTACTCAAATGTCATTCAGATTCAAATTCTTGGTTTGTGCTTACATTGGGTTCATAGT AGTTACTTAGTGATAGTTACTTGTTGAGTGGGTTTACCTGAGATAACTAAAGTTTACTCAAATGAGTTTACACTCAAGAT AAGTCGATTTTGCACCCTAGACTCGTAATCTCGTATGATATTATGAGATAGCACGCGAGTTTAACAACGTTGGTCATTGC TACTGGCTAGGAAAAATTGCTAATAATATTCAAAAATAAAATAAAAACATCATTATTGTTGGCCACCTTCTGCTTGCCTT TAGTTTTTCCAATTAAAGAGTTTCTTTTTTATTATTACTGCTATTAATACTACTACTACTATTATTATTAATTCACCAAG GTGAGATTATATATCTGCAAATTATTTAAATTATCTTATAGGGATTTCTCTCATTTCTCTGCATTGTATGTGCTTTCTTG GATTGGAGTAATTAAAATCATTGTTTTTTTTATCTTGATTTGCAGCCTGGTTATGAACGTCTGTGTTGCTTGACATGCAT GCAACCGCGGGATCACAATTTTGCCACCACTTGTGTTTGTAGAGTACCCAAGCAACTTAGGGAGGAGAAGGTAATAGAGT GTGTCCATTGTGGTTGCAAAGGCTGTGCAAGTGGGAACTGATTGGACATCAATTGTAGTTGCATAAAATGCCCAAGGAGG TTTTGTAAGTTGAGAAGGGGACATGGCAAGAGTATGGAGTCAGTATTCCTATTTGCCTTTCAAAATATTGTTTGAAACTA AAGGACCAAGTTCTCTATTCCTGCCAGGAGTGAACAGACAAACTGAAGTTTCTCTCCTTTCATCATTCAATGTGTGAAAG AGAAAAGAAAAAGAAAAGGTTACTTGTAAACAGTAATGGAGATTGTTGTCAGTTACTCTCCATAACGTTTGAGAAGCTTT GGTCCCACAGCACTTAAAAGACAATGTGCTCAAATATTAAGGGCTTGTTTCATTCCCTTCTTACTTTTCTTAATTTAAAA GCTATTTTCTGAAACAGTTTTCAAAATCTATTTTTCAGAAGAACATCAGAAAATAACAGTTTAACAGTTTGAACTAGATG TTTTTCTAAACTTGAAAGAAATGTGACCAGAAAACTAAAGAAAAAACTCCTTAATATAATAATAGTATTGAAGATTTTAT ATTGTCTAGTCTAATTGGTCATAGTAGATTTTACTTATTGTGTTAAACAATTGTTGTATTACTATTTTTTTTTTGTTTTC AGCTTAGGCCCCGTTTGGAAACACAATTTAATTAAGCGCTTATGGTCATCAACGCTTGTGACATAAGCACTT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0049100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCTAAAGTAAAGACAAACCGTGTGAAATACCCAGAGGGATGGGAATTAATTGAGCCCACGCTCTGTGAACTACAAGC AAAGATGAGGGAAGCTGAGAATGATCCACATGATGGCAAAAGAAAATGTGAGACTTTATGGCCTATATTTAAAATTGCAC ACCAGAAGAGCCGCTACATATTTGACCTCTACCATCGGAGGAATGAAATTTCTAAAGAGTTGTATGAATTCTGTTTAGAT CAAGGATATGCTGACCGCAACCTGATTGCAAAATGGAAGAAGCCTGGTTATGAACGTCTGTGTTGCTTGACATGCATGCA ACCGCGGGATCACAATTTTGCCACCACTTGTGTTTGTAGAGTACCCAAGCAACTTAGGGAGGAGAAGGTAATAGAGTGTG TCCATTGTGGTTGCAAAGGCTGTGCAAGTGGGAACTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0049100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRNEISKELYEFCLD QGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCKGCASGN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR19411:SF6
1 145 145 4.0E-93 –
Pfam
PF01125
1 143 143 1.8E-62
IPR001748
PANTHER
PTHR19411
1 145 145 4.0E-93
IPR001748
PRINTS
PR00322
12 32 21 1.4E-56
IPR001748
PRINTS
PR00322
47 70 24 1.4E-56
IPR001748
PRINTS
PR00322
71 96 26 1.4E-56
IPR001748
PRINTS
PR00322
97 122 26 1.4E-56
IPR001748
PRINTS
PR00322
133 142 10 1.4E-56
IPR001748
ProSitePatterns
PS00998
133 142 10 -
IPR018230

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005634
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0049100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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