Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0049100 |
| Transcript ID | LotjaGi5g1v0049100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein BUD31; TAIR: AT4G21110.1 G10 family protein; Swiss-Prot: sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2; TrEMBL-Plants: tr|C6SVT6|C6SVT6_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0049100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8320113..8323855) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCTAAAGTAAAGACAAACCGTGTGAAATACCCAGAGGGATGGGAATTAATTGAGCCCACGCTCTGTGAACTACAAGC AAAGATGAGGGAAGGTTGGGATATTAGATGCTATGCTTGCCTTCCTTGCTATTTTCCCCCTTTTCTTTCTGTAATCTGTA AACATGATTTATTTTTTTTCATATCCTTTATGTGGCAGCTGAGAATGATCCACATGATGGCAAAAGAAAATGTGAGACTT TATGGCCTATATTTAAAATTGCACACCAGAAGAGCCGCTACATATTTGACCTCTACCATCGGAGGAATGAAATTTCTAAA GAGTTGTATGAATTCTGTTTAGATCAAGGATATGCTGACCGCAACCTGATTGCAAAATGGAAGAAGGTACTTATCATGAG TTATTAATTCTATTTTTTGGAGTGCTTTTGTTTTTCTATTTCCTTTTTCATTGGAGAATAAGTACAATCAGACTGAAGGT AAGAAATTTGCATCTGAGATGGTAACCCCTGAACCTTATACCTAGAAGAAGAGAACTTTAACTGTATCCCAAATAAACTT AGTGGGTGAAGAACCTCCTTCCGTGAGCTCGCCTCAAACTCTTTGAAAAGATTTTCTTTCTACTACCAGTTACATTATTA CAACTATTTAGAATAAAGGCTTAACTGCACTTTTGGTCCCCCACTTTATTCAATCGTGTGATTTTGGTCCTTAACAAAAT TTATTAGCACTTTGCGTCCCTCACGTTAACTTTCGTTTGCACTTTTGGTTTTCCTTCCACTCCCATCCAATATTTAACGG TTTTTTGTTAAGAAATTAATTAAAAATAAAAAACAAAAACCTAAACCCAGAGATCCATAAAGTTCTTGAATATCTTCATC TTCTTCAAACATTCTTTTATCTTCCTCATCATGTTATTCATCTTCAAATCTGAAAATCCTTTCAACATCTACGATTCCAC CTTCATCTACATAAAAAACAAAGGGAACAAAAGGAAAAGAAAAAGAACAAAACAAAAAAAACCCCAAATCCAAGAAACCC TAACACTAACCTAGAATCCCCAAATCCAGATTTGATCCATGCCCTTGTGCAATACGTGTTCACATAAGGCTTATAAAAAG AGGAAAAGAATTGTAGCACTCAGAACAAAGCTACAATCCCATCACACCCCACCTTTCAAGAAATGCAAACAGAGCACTCC AATGAGAAACCGAATTACAAATTGAAGAACGAGTGCTCCCGGTGGCGGAGGATGTTGAAGAAGATTCGCAGTAGGTGGAG GAACTGCAAAGTCGAATCCCGATGGGGAAATGGAGGAACCAATCAGATCTGGGTTTGGGGATTCTAGGGTAGGATTTGGA TTTGAGCTGGTGACACTTTTGATGTTTCTCTGTTGACAATTGAAGGGGTAATTTTCTGGGTTCTTCCTCTCATGATTTCT CTTTCGTGTTCCCATGGCGAGAGTAACACTTTGAATGCATGAAATTTGTGCGTTATGCATTTGGGGGATTAAGGGGTTTG GTTTGGGGGTGCTGATATAGCCATATGGGTACTAATTTTTCCTCTTATGATGGGGATTTTGCTGCTTTGAAGCCATGGCT TGGGGACATATGTGAGGGTTGATGGGTTTTTAGATGAAGATGATGAAAGAAGATGCTTGAAGAAGATGAATATTCATAAT GTTCTGGGTTTTCATTTTCATTTTTATTTTTAATTAATTTTTTAACAAAAAAACTGTTAAATATTGGATGGAAGTGGACG GAAAATCAAAAGTGCAAACGAAAGTTAATGTGGGGGACGCAAAGTGCTAATAAATTTTGTTAAGGACCAAAATCGCATGA TTGAATAAAGTGGGGGACTAAAAGTGCAATTAAGCCTAGAATAAACTAGAATTAGCATCTCCATGTGTTATGGGCCTGTT CCCAAGGCCCAAATTTTCTAAGGTTTATGTGCGGAGAAGGAAGAGGTGGGATGCACCAAATTGGACCACCGGCTGAGGTG GCATGGGCAAGAGGGACAAGTGAGGGGAGCGTGCTGGCTGAGTTGGAGGGAGAATATAACCGTGAGAGGGCAGGAAATCG GGTTAGGCTTGGGTTTAGCTGGAATTGGGAGAGAAGGGGCACTCTCGAAATTGCTTCTAGAGTTTAGTGCTTGATGCCTT TTTTTAGATGGAAATTGATTGCCTTTTCTTAGATAATAAACACTATAGCACCAGACATGCCTTTTAATGATACTTGTTTT ATGCTTGCTTCATTTACTCTCCTTCAAAAAAAAAATCAGGGACATTTTGAAAATTATCTGGACTATGCTGCCGTGGTGTT AGTTTAATTTCTGGTATTCTTGATTTAGTGCCTTAGTTTTGAGTTCATGGAAATTCGTTGAAGTATTGAAATAAAGGGAT TGTTATCGGGATGTGAATATGTGTGGCTTGCATGTTATCATCATTGCTGCTTAAACATTCTTCTAAGTGACCTTTCCTGG CAAATAATATCAATAGGCCAAGGTTCAGTAACCTTTTTCTCCATGTACATATGCTGTGAATTGCATGTGTTGGAATGCAA TGCATGTACAGTGTCGGACATTCAGTGTCCTGTTTCATATGTTGTAGTGGACATCATCTTCTAATTTGATTTAACTAGTT AAGGGAACTGTTGCCTTCCTTACTTGAATTGTATTCGTATTCTAATAAAGATATAAATTAGGAATCTTGTTTTGAATTGT TACAGTATTAGAGAATGGTGAAACATTTTACTGTCATTGTACTCATATGCTGTCTTGATCTGATATTGAAATTTAAAAAA GATGGATTGATGATTGCTTTGTTGGTTTTGGTGTAACCTGATGCTGTGCTGGTTTTCTTTGTTTTCGTAACCAATGATCT TACTCTGATAATCTAAAACTGAGATTTAATCATGTATTACTGTTCAAGGAGAAATTGGTATTTAATGTTATTTGATGTAC TTGTTCCAGCAGAACCTGTGTTATCAAATAAGCATGACCCTAACCACAACCTGCCGGTACACTATAAGGTTTAGTTCTGA ACCCAAGAACAAGAGAGAAGCTCTCACAAATGGAGAAAACTCAATTACTCAAATGTCATTCAGATTCAAATTCTTGGTTT GTGCTTACATTGGGTTCATAGTAGTTACTTAGTGATAGTTACTTGTTGAGTGGGTTTACCTGAGATAACTAAAGTTTACT CAAATGAGTTTACACTCAAGATAAGTCGATTTTGCACCCTAGACTCGTAATCTCGTATGATATTATGAGATAGCACGCGA GTTTAACAACGTTGGTCATTGCTACTGGCTAGGAAAAATTGCTAATAATATTCAAAAATAAAATAAAAACATCATTATTG TTGGCCACCTTCTGCTTGCCTTTAGTTTTTCCAATTAAAGAGTTTCTTTTTTATTATTACTGCTATTAATACTACTACTA CTATTATTATTAATTCACCAAGGTGAGATTATATATCTGCAAATTATTTAAATTATCTTATAGGGATTTCTCTCATTTCT CTGCATTGTATGTGCTTTCTTGGATTGGAGTAATTAAAATCATTGTTTTTTTTATCTTGATTTGCAGCCTGGTTATGAAC GTCTGTGTTGCTTGACATGCATGCAACCGCGGGATCACAATTTTGCCACCACTTGTGTTTGTAGAGTACCCAAGCAACTT AGGGAGGAGAAGGTAATAGAGTGTGTCCATTGTGGTTGCAAAGGCTGTGCAAGTGGGAACTGA
CDS sequence (LotjaGi5g1v0049100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTAAAGTAAAGACAAACCGTGTGAAATACCCAGAGGGATGGGAATTAATTGAGCCCACGCTCTGTGAACTACAAGC AAAGATGAGGGAAGCTGAGAATGATCCACATGATGGCAAAAGAAAATGTGAGACTTTATGGCCTATATTTAAAATTGCAC ACCAGAAGAGCCGCTACATATTTGACCTCTACCATCGGAGGAATGAAATTTCTAAAGAGTTGTATGAATTCTGTTTAGAT CAAGGATATGCTGACCGCAACCTGATTGCAAAATGGAAGAAGCCTGGTTATGAACGTCTGTGTTGCTTGACATGCATGCA ACCGCGGGATCACAATTTTGCCACCACTTGTGTTTGTAGAGTACCCAAGCAACTTAGGGAGGAGAAGGTAATAGAGTGTG TCCATTGTGGTTGCAAAGGCTGTGCAAGTGGGAACTGA
Protein sequence (LotjaGi5g1v0049100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPKVKTNRVKYPEGWELIEPTLCELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRNEISKELYEFCLD QGYADRNLIAKWKKPGYERLCCLTCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCKGCASGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 145 | 145 | 4.0E-93 | – | |
| Pfam | 1 | 143 | 143 | 1.8E-62 | ||
| PANTHER | 1 | 145 | 145 | 4.0E-93 | ||
| PRINTS | 12 | 32 | 21 | 1.4E-56 | ||
| PRINTS | 47 | 70 | 24 | 1.4E-56 | ||
| PRINTS | 71 | 96 | 26 | 1.4E-56 | ||
| PRINTS | 97 | 122 | 26 | 1.4E-56 | ||
| PRINTS | 133 | 142 | 10 | 1.4E-56 | ||
| ProSitePatterns | 133 | 142 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi5g1v0049100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…