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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0050700 |
| Transcript ID | LotjaGi5g1v0050700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative; TAIR: AT4G31780.2 monogalactosyl diacylglycerol synthase 1; Swiss-Prot: sp|Q9FZL4|MGDG_SOYBN Probable monogalactosyldiacylglycerol synthase, chloroplastic; TrEMBL-Plants: tr|V7CUN5|V7CUN5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0050700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8550623..8554422) extracted from Lotus japonicus Gifu genome v1.2.
AGAACGGAGTTCTTTTTCGTACAGGTGTTTGTAACTGATTTATGGACTGAACATACGCCTTGGCCATTCAATCAACTCCC CAAGAGCTATAGCTTTTTGGTGAAACATGGGCCATTGTGGAAGATGGCATACTATTCCACTGCCCCACGTTTAGTGCATC AGTCTAATTTTGCGGCAACTTCAACATTCATTGCTCGGTGAGGTTTTGGGTGCCTTCAAATTTCACAGAGCAGTTCCTAA CCTTATTTCTTGTCAAATTACTTCAATGGGTAAAAAAGTGTTTTTATATGCCATTGCCAGATAGCTATTAGGTTTCTGGA ATGACACGTAAGTGATAGTCCAGACACTTACTGATCTAGCATCCTCCCTGACTTTTAAGTCGATAGTTTCTTTTGGATAA TCAAAAGAAGTATAAGATGTTATCTAAGATGGTTTCAAGTTTACTATGGTCTGGATTTCTAGCGGTGAACTTTTATTTTA TACGTCTATTTCTGTTCATAGACGTAAGGAAGACTGCTCGGTAATTTGGCAACGGTTCAGCATTGTTCTAATTTGATGAT ACATGTGCGATTCTAATATAATGTGCATGACATTTTTCAAAAACTACATTTGGTTGCATCTTGCAATGTTTACTATAAAG CTTTGTGTTAATATTAGGCAGAAGTTGTTGACATTTCATGCTATTCGTGCAGATATTTTTAGCTATAGAAACAATTTGTT GTGCATATTTAGGTTTTATCAAATACTGTATGTCTGAATGTCACATCCTTTCTTTTTTTTTCAGTGAAGTTTTTAGAGGG TTAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCACTGATGCAACATGTTCCACTTCGTATTTTGAGGGCCAA GGGTCTCTTAAAGAAGATTGTTTTTACCACAGTCATCACTGATTTAAGCACATGCCATCCAACATGGTTAGTTTTGTCTG CATTATTAATGTTTGTTCTGAAGTTATATCAATAGTCGTGTTTTGACATCTTATTTTTTGTATTCAGGTTTCATAAGCTT GTAACTAGATGCTATTGTCCAACAGCTGACGTTGCCAAAAGGGCACTGAAAGCTGGACTCCAGCAATCCCAAATAAAGAT TTATGGCTTACCTGTTCGACCTTCCTTTGTTAAGCCTGTTCGAGCAAAGGTATGTTGTGTTACTATAGCTATACTTTGAA TTGGATGGATTAGCTTATGAATCTGAAACTGTAATACAAATACAATATGCAATGGTATATCTATTATTTCAACCTGACCT TTTATTGATTGTTTGATACGCTGAGATAGGATAAAGAATATTAGGACTCTAATAATATAAGTGGTTAGGTTTATGAATTA TTGCCAGCAAATTATAGCCTTCTTTGTAACCGGTGCTCAATTATGCTCCTGCTAAGGGTAGGCCTATCAGTTACAATCTC AGCCATTTATTTTATATATAATTTCTTCCCATGTTATCATATGAAAAATGAACATTAAAAATTGATTTTTCTCAGTTATA AATGGGAAATGGCTTAATACAAAAGTTATTTTGGGTTCAGTCATTATGACTATAAGATGCAGTCAAGCATTGTAAGTTTT GGTTAATGTACGTTCATGTAGACATGATGCTTATTGATGCATATGCAGAATGTATTTCAGTTCAGTTACTTTGAAGGTAT AAATTTGGATCTGAAATGTAATTCACTAGTTCTCAAGTCACAAGAAAATTAACAAAGTTATTGCCTGTTTTTGCGATTTA ATTTTCATATCTCTATTATATAATATTGACCTTGTTGCTTTATGCTGTAGGATGAACTAAAGAGAGATTTAGGGATGGAT GAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGTGAAGGTATGGGCCCCATTGAGGCCACTGCTCGTGCACTTGGAAA TTCATTGTATGACGAGAATCTAGGGGCTCCTGTTGGTCAGATCCTTGTGATCTGTGGTCGCAATAAGAAGCTTGCTAACA AACTCAACTCTATTAAGTGGAAGATTCCTGTGCAGGTATTGATACCCTTAATAAATTTCAGAGCCTTGTTCATGCTTTGT GAATCCCATGTAAATTATATACTGTGTTTGTGCGTCTGATTACATTTCCTCATTTCTTGTCTATATTTGCAACTACATAC TATTAAATAACGTCTTTGTCTGCAGTCCATGGTTGGCGACTGACGTATACTTCTTTCTCTTTTACATGATGAACTAACAT CTGGCCTTATGATTGAATTTCTCATATCATATGATATAGCATGTTTGGACTTGGAAGTTGGAAGTTGGAAGTATATAGGA GAGAAAAATGTAACTCATGATGCAATTGAATATAAGAACAAATGGAGACTTTGAGAATTATGTGCATGTGTGCTCCAACC CAATTAAGTGAGGGGGGTTTGTTGAAGTAAGAAAATGGAAGTGGGCTCCAAATATACATAAAAAATGTGATGATGAAAGT TGTAGCTATAATTTGAGTGGTTTTCATTAGTTGTCCAATGATTTTTTGCGGTAATAAAATTTCTAGGTAGGATTCCTTCT GTTAGGGGTAAGAGAAAAACCTAATTTTCTTTTGACAAAGATTATCAGTTTCTCTCATCTATGCCTTCTGCAATGAATAA GTAAAACTATGAAGTTAGTTTAGACTTATGTTTACCTCTGGTTGAACTAGAGTGTATTTAAACTAGTTGTTTTTCGTTCC ATGAGTTAAGGAAGAAAATGTCTGGTGTGGAACTTCCATATTAAATTGATTTTTATGAATAATTAGATGAACATAGAAAT TAGTGTCTAATGCTTAGGTTAAATTCTTGGAAGTCCCTGACTTATCTTGCTTTACAAATATTTAGGTCAAGGGTTTTGTT ACCAAAATGGAGGAATGTATGGGAGCTTGTGATTGCATCATTACAAAGGTTTGAATTCGATCTCACTGCCCTGACTTGTT TTCTTACCTCATTATGACTGTTATTGACGGATTTTTTTCTCCTTGTAGGCGGGACCTGGGACAATTGCAGAGGCCATGAT CCGAGGCCTTCCTATTATCTTGAATGATTACATTGCGGGGCAGGTAATTTTGGTTCTGGTTATATATAATTCCTCAACCT TTTTATTATTATTTTTTTAAAAAGTCCAGCTAGTCCGTGGATGGAAGTAAATTTCAAGCTGAGTTCTGAACTCAACTGGG ATATTCTAGCTAATAAAAATTTGTAACATGACCCTGATGTTTGGAAATTCTTCTAAAATTGATTATGAAGCCATAATCAA TTCTGGGGATAAGCTTCTATGAGTAGCTTCTTGGTTCCAAAATTGATTGTCATGAAAGAGAAGCTGATAACATAGTGAAT TGGTGGATAGAATGTTTCTCAAAGTAGGACTGTAGGTAATTAAGGGTTTGTTTAAACAATTCCATCGTGCGTGCTTTGAA TAGTTAGAGCGAGTATAGTAAGTTTTGATTGTGCGTTTGTAAGGGGTTGCAGTCACATTTAAATATGGTCACTGAGTACA AACCCATACATGATTGAAAATGGTGAAATTCCTTTCATTTCAGGAAGCTGGCAATGTTCCCTATGTAGTTGAAAATGGTT GTGGGAAGTTCTCTAAATCGCCTAAGGAGATAGCTAAAATTGTCGCGGATTGGTTTGGTCCAAAAGCTCATGAACTAACA GTAATGTCACAAAATGCATTGAAGTTAGCAAGGCCAGATGCAGTAGTCAAGATAGTACATGACCTTGACGAGCTTGTAAG GCAAAGAAGCTACTTACCAGAGTATTCTTGTATAGCTTAA
CDS sequence (LotjaGi5g1v0050700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATACTATTCCACTGCCCCACGTTTAGTGCATCAGTCTAATTTTGCGGCAACTTCAACATTCATTGCTCGTGAAGT TTTTAGAGGGTTAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCACTGATGCAACATGTTCCACTTCGTATTT TGAGGGCCAAGGGTCTCTTAAAGAAGATTGTTTTTACCACAGTCATCACTGATTTAAGCACATGCCATCCAACATGGTTT CATAAGCTTGTAACTAGATGCTATTGTCCAACAGCTGACGTTGCCAAAAGGGCACTGAAAGCTGGACTCCAGCAATCCCA AATAAAGATTTATGGCTTACCTGTTCGACCTTCCTTTGTTAAGCCTGTTCGAGCAAAGGATGAACTAAAGAGAGATTTAG GGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGTGAAGGTATGGGCCCCATTGAGGCCACTGCTCGTGCA CTTGGAAATTCATTGTATGACGAGAATCTAGGGGCTCCTGTTGGTCAGATCCTTGTGATCTGTGGTCGCAATAAGAAGCT TGCTAACAAACTCAACTCTATTAAGTGGAAGATTCCTGTGCAGGTCAAGGGTTTTGTTACCAAAATGGAGGAATGTATGG GAGCTTGTGATTGCATCATTACAAAGGCGGGACCTGGGACAATTGCAGAGGCCATGATCCGAGGCCTTCCTATTATCTTG AATGATTACATTGCGGGGCAGGAAGCTGGCAATGTTCCCTATGTAGTTGAAAATGGTTGTGGGAAGTTCTCTAAATCGCC TAAGGAGATAGCTAAAATTGTCGCGGATTGGTTTGGTCCAAAAGCTCATGAACTAACAGTAATGTCACAAAATGCATTGA AGTTAGCAAGGCCAGATGCAGTAGTCAAGATAGTACATGACCTTGACGAGCTTGTAAGGCAAAGAAGCTACTTACCAGAG TATTCTTGTATAGCTTAA
Protein sequence (LotjaGi5g1v0050700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAYYSTAPRLVHQSNFAATSTFIAREVFRGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWF HKLVTRCYCPTADVAKRALKAGLQQSQIKIYGLPVRPSFVKPVRAKDELKRDLGMDEDLPAVLLMGGGEGMGPIEATARA LGNSLYDENLGAPVGQILVICGRNKKLANKLNSIKWKIPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIIL NDYIAGQEAGNVPYVVENGCGKFSKSPKEIAKIVADWFGPKAHELTVMSQNALKLARPDAVVKIVHDLDELVRQRSYLPE YSCIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 323 | 323 | 9.3E-171 | – | |
| CDD | 1 | 313 | 313 | 1.47426E-111 | – | |
| Pfam | 2 | 115 | 114 | 5.4E-39 | ||
| SUPERFAMILY | 13 | 311 | 299 | 7.33E-25 | – | |
| Gene3D | 124 | 296 | 173 | 1.1E-32 | – | |
| Pfam | 174 | 240 | 67 | 3.0E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Glycolipid biosynthetic process | The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). | ||
| Molecular function | Transferase activity, transferring hexosyl groups | Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi5g1v0050700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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