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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0058700 |
| Transcript ID | LotjaGi5g1v0058700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Reductase 1; TAIR: AT1G59950.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q9SQ68|COR13_PAPSO NADPH-dependent codeinone reductase 1-3; TrEMBL-Plants: tr|A0A0B2PQD2|A0A0B2PQD2_GLYSO NAD(P)H-dependent 6'-deoxychalcone synthase; Found in the gene: LotjaGi5g1v0058700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9828496..9828936) extracted from Lotus japonicus Gifu genome v1.2.
GTATGATGCACTATAATCCATTTGATACTCACAACCTTACGAGTTGGCGTCTGACACCAAAACATGTCTTCATCACTAAT CGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTGCCGGTGATTGGACTCGGAACTGCTACCATCTTAGGCTCCGCTA CCGGCGATGACACCACCAAGGTGGAAGTGCTAGAGGCTATTAAGCTCGGTTACAGGCACTTTGACACAGCTTCGATTTAT GGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGTAGTAAAACTTGGTCTCGTTGGGTCTAGAGATGAACTCTTTGT CACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCCTGCTTTGAATAAAACACTTTAGTAAGGACAAC TATTGTCAATTTAAATTATGATCATTAGATATCTTCTCTGA
CDS sequence (LotjaGi5g1v0058700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCATCACTAATCGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTGCCGGTGATTGGACTCGGAACTGCTAC CATCTTAGGCTCCGCTACCGGCGATGACACCACCAAGGTGGAAGTGCTAGAGGCTATTAAGCTCGGTTACAGGCACTTTG ACACAGCTTCGATTTATGGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGTAGTAAAACTTGGTCTCGTTGGGTCT AGAGATGAACTCTTTGTCACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCCTGCTTTGAATAAAAC ACTTTAG
Protein sequence (LotjaGi5g1v0058700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSLIVPNVVLSNNRNLPVIGLGTATILGSATGDDTTKVEVLEAIKLGYRHFDTASIYGSEEALGEAIAEVVKLGLVGS RDELFVTSKLWCSDNHPDLVLPALNKTL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 108 | 105 | 3.7E-29 | ||
| PANTHER | 7 | 108 | 102 | 4.7E-39 | – | |
| PANTHER | 7 | 108 | 102 | 4.7E-39 | ||
| SUPERFAMILY | 9 | 108 | 100 | 5.37E-25 | ||
| Pfam | 21 | 100 | 80 | 2.5E-11 | ||
| ProSitePatterns | 49 | 66 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0058700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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