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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0059400 |
| Transcript ID | LotjaGi5g1v0059400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myosin heavy chain-like protein; TAIR: AT4G32190.1 Myosin heavy chain-related protein; Swiss-Prot: sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3; TrEMBL-Plants: tr|G7I718|G7I718_MEDTR Myosin heavy chain-like protein; Found in the gene: LotjaGi5g1v0059400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9962786..9966813) extracted from Lotus japonicus Gifu genome v1.2.
AATTTCTTGTCCTCATTTAATCCGTTTATACAGTGCCATGGTTTACATAAAAGTAGCTCGTCATTTTCATTATCTGAATC CAAAACTTTGATCGACAAAAAAAGAATAAGAATCCAAAAATCACTTCTTGCGTAAAACTTGTCATTGTTAGAAGTTCACA ATTAAGCTTGCTTCTGCGCCGCTTTGTAAAATCAATTCTTCTTTGCTTCTTCTTCTCTCTATTCAGCATCTTCTAAAAAC ACTGTTTGCGTGCGATTGTTGATGGCGTTTGTCGATTAGTTAACTGCAAATGCACCTATGGCTTTCTCCTCCGCATCTCT TCGCTCTTCCTCTTATTCCTGCAGCTCACAGGTTTGGTTCTTCTCTTTCTATGTCGGTTTTCGATTGTACTTTGAAGTTT GTTCCATAACATGTAGTATGATTATGTTGTTGAAATCCAACAAACAGGGTTTATGTTTCATAAAAAAATAATTTAATTCA AATTTGGTGAATCATGATTTGTTGTGAGTGCTTTTTTCTTGATGCAATACTTGTTGTGATTTGTGCCACAAATTTTATAA TAATTAGTTAAAAATCTGCTGGTTAATATTAACATGTATGATTATGTTGTTGAAATTCAACAGGATTTATTATGATTTAT AAAAAAATTAAATTAATTCAAATTTGGTGAATCTTGATGTGTTGTGTGCTCTTTTGTTCATGTAATGCTTGTTGTGATTT ATGCCAAAAATTTAAAAATAACTTCTGTTTGTTTCCGATTGTGCTTTGCGGTTCCGTAATATGAATAATCTTGTGGAAGT TTTAATGAATAATTAAAAAAAATTGATGGAAATCTGGTGAATCTTGATGTGCTGTGTGTGCAGTTGTGGTGCTCTATAAG GTGCAATACGAAGCAGTGTAGTAGAGGAGGTTTGGTTGTCGTCGGAGGGAGAAAAGGTCGAAGTGTAGGGAATGGTGTTT GTGTTGTTAGGTCGGTGTTGAATGACAATAGGTCGAGTGTTGGTAGTTATGGAGGGGCTGAGCCTGCTAGGGTTCTTCTG GAGAGGTTGTTTGAGCAGACGCAGAAGCTGGAGAACCAGATGAGTGGTGGGGAACAGGATCTTCGGGGTTTGGAGACGGA TCTTTTGGCGGCGCTAACGGCGATGAAGGAGAAGGAGGATCATTTGCAGGAAGTGGAGAGGGCTGTGGTGTTGGAGAATG GGAAGTTGAAGCAGGCGAAGGAGGAGTTGGAGAGGCAAGAGAATGAAATTGAGGCTGCTCGCACCAGGTATGAGAGGCTT GAGGAGGAGATGAAGGAGGCTACTGGTTCTTTGGTGTCTCAAGCTGGCCAGATAGAGGAACTGAAGCTCCGGCTTAGGGA TCGTGATCATGAGATTGCTGATGTCCGGAATGCGCTGTTTTTGAAGGAAGAAGAAATGGAGAAAATGAGGACTGATTTGG CCAAGAAGAGTGAGGAAGCTGCTTCTGTTGATTCTGAGCTCAGACAGAAGGCTCAGCTTCTTAGTGAAGCAAATGAGGTT GTGAACAAACAAGAAGTCGAGCTTCAGGAACTGAGGAGGGCTGTCTGGGAAAGGGAAGAAGAACTCCAATTGTCTCTGGC CCTGAGGGAAACTGAAGAAGAAAAGCTCAAGGTTACAGAGGCAAATTTGGAAAAGCAGGCGATGGAGTGGATGTTAGCAC AGGAAGAACTTAGGAAGCTGCGGGAGGAGGCTTCAAGACAAGCGCAGGAAAGTAGTGAAACACTGGAGGATTTCACAAGG GTAAAGAAGCTTCTCAGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCACTGGCATCTTCTAGATATAAAATGGA AGAACAAGAGCGTTTGTTAGAACAGCAGGCGGCAGAACTTACAGAGCAGAGGGAAAGTGTTATGTCATACATGGATAATT TAAAATATGCCCAAATAGAAGTGGAGAGTGAAAGAACAAAACTTAAGGTTGCAGAGGAATTGAACAAGGAACTTGAACGG GATCTGTCCCTCGAAAAGGAGCATATAAAGGAGTTACAAGAAGAGTTGAAGAAAGAGAGAGCTTCTTTGGAGCAGACAGT TCAAGAAGTGTCTTTGCTTCAGGAGGAATTAGAGAAAAGAAGTGCAGAATTTAGGGAAGCGAGTGCGCTTCTTCAGCTCA AAGAGTCAGAACTTGTTGATGCTAAGCTAGAAATCCAGCACTTGAAATCTGAAAAGGCTTCTCTTCAGGATCTCTTGGAG GAGAAAGACATGGAACTTTACAATGCTAGGAAGATGCTGGTGGAGGTAAGCCAGGAAATTTCTGATCTTAAGATGCTTGT GAACTGTAAAGAAACACAGCTTATTGAAGCGGCCAATATGCTCAGGGAGAAAGATGAGCACGTGAAGATCATCGAGAACA AGTTGAATAATACAAACCTGAAGGCTTTCGAGGCTGAAACTGTGGTAAAACGAATTTTAGACCTCACTAATCAACTGGTT ACTTCCATTAATGATGAAGACATAAACTCACCGAGACCTCTAGATGAAATGGGTAATCAACTACTCGAGCAACTTCTGGA GGAACCTAATAATGATTTGAGGTGGCAACAAAAACGGCTTGAGAATCAACTTGAGCTGACCAAAGAAAGCTTAAAAACAA AGGAGATGGAAGTTCTTGCTGCTCAGAGGGCTCTAACAATAAAAGATGAGGAGCTTAAAATGACTCTTGCAAGATTGGAT GCAAAAGAGGAAGAGTTCAAAAAAGCTAAGGTGGAGATGACAGAAGATGCTAATGATCTTCAAAGGCTGTATGCTTTTGC ACAGGAGAGAATTGGTGAGAAAACTATGGGGGACTTGGCAGTTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGTTG AAGCTTGTACAAGCGCTCTGCAGAAACTTGCAGAAATGAGTCGAAAACTATTGAATACGGCGATCCTGAGTGTTGAGGCT GACAACTATATCCTGAAAAATAAGGATAGTAACCCCAACTCAATCAAAAACATCAATAACATTGATGTTTTCAGTGTGGT AAAAGCAGGAGTTGCTCGACTTTCATCTTTGACTGAACAGCTTGTGCTAGAAGCGGGTATTTCTGCTGCTGCAAACTAGA AGAGGTATTGAAGAAGGTTGGGCAGCGATAATGTATGTTGTTGAGGCCAAAAGCCATTGCAAGGCTAACCAGGCTTTTTG GTGGATCATAATAATATCTTCACTTCATTTGCAAGATATGCGTAGCCATCATATCTGTTTAGTTGTGGAGGTGAAATCTT ATTGTTGTACTATATTCATTCAGAGTATATTTGATTTGTTTTCGACAACATGAATAGATGGAAAGAGTTTAGACTGTTTT CCCTCATTTTCTACTAAATCATGTGTTGCATCTTGCTTTCAAGATTGTGTAAAAGGAGTGACATAACTTTGTATAAGACT GGCTTGTAAATATTCGTCATTGATGCTACTGTTAAAGGTGTAGCATTTATAGCAGCAATGCTGATTCATTGCAAATTTGC AACCATCTATAATATTTGTTCAGATTCAATGAGCATTCATTTTTTTATCAGCAGTAAAAAACATTCCAAAACAAAAAAGG TATCAGGCTGCAAAAATAGATTGAAGATCAAGGTGAGAATTCACACCAACGATTTTACTTACCCCACCACCCTTCCAATT AAATTTCCTAAACTAGCTCTACCATCACTCATCCCATGACGTCTATCGAAATTTAATTTCTGAAAGCTATTTATTCTGGA AATTAAATTTCTGAAGCTTTTTAATAGTTAGATTTGTTTCAAAAATTAGCTCCATCATCTTGCAGTCACTTTCCACCACC AGAGGATCATGGCCATACTTGGACCTCCTGTCCTCCACAATTTACCTGGATTGAAGTGTATAAATAAAAATATGGTGGCA AAACACCCCCTCCAATTTGACTCAATTTTAAAACATCAACCGGACAAATTAACAAAACTTTAGTGGTATTTCATTTTGAT CTAAACTTAACATACCAGATAAGAAGAA
CDS sequence (LotjaGi5g1v0059400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCTCCTCCGCATCTCTTCGCTCTTCCTCTTATTCCTGCAGCTCACAGTTGTGGTGCTCTATAAGGTGCAATAC GAAGCAGTGTAGTAGAGGAGGTTTGGTTGTCGTCGGAGGGAGAAAAGGTCGAAGTGTAGGGAATGGTGTTTGTGTTGTTA GGTCGGTGTTGAATGACAATAGGTCGAGTGTTGGTAGTTATGGAGGGGCTGAGCCTGCTAGGGTTCTTCTGGAGAGGTTG TTTGAGCAGACGCAGAAGCTGGAGAACCAGATGAGTGGTGGGGAACAGGATCTTCGGGGTTTGGAGACGGATCTTTTGGC GGCGCTAACGGCGATGAAGGAGAAGGAGGATCATTTGCAGGAAGTGGAGAGGGCTGTGGTGTTGGAGAATGGGAAGTTGA AGCAGGCGAAGGAGGAGTTGGAGAGGCAAGAGAATGAAATTGAGGCTGCTCGCACCAGGTATGAGAGGCTTGAGGAGGAG ATGAAGGAGGCTACTGGTTCTTTGGTGTCTCAAGCTGGCCAGATAGAGGAACTGAAGCTCCGGCTTAGGGATCGTGATCA TGAGATTGCTGATGTCCGGAATGCGCTGTTTTTGAAGGAAGAAGAAATGGAGAAAATGAGGACTGATTTGGCCAAGAAGA GTGAGGAAGCTGCTTCTGTTGATTCTGAGCTCAGACAGAAGGCTCAGCTTCTTAGTGAAGCAAATGAGGTTGTGAACAAA CAAGAAGTCGAGCTTCAGGAACTGAGGAGGGCTGTCTGGGAAAGGGAAGAAGAACTCCAATTGTCTCTGGCCCTGAGGGA AACTGAAGAAGAAAAGCTCAAGGTTACAGAGGCAAATTTGGAAAAGCAGGCGATGGAGTGGATGTTAGCACAGGAAGAAC TTAGGAAGCTGCGGGAGGAGGCTTCAAGACAAGCGCAGGAAAGTAGTGAAACACTGGAGGATTTCACAAGGGTAAAGAAG CTTCTCAGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCACTGGCATCTTCTAGATATAAAATGGAAGAACAAGA GCGTTTGTTAGAACAGCAGGCGGCAGAACTTACAGAGCAGAGGGAAAGTGTTATGTCATACATGGATAATTTAAAATATG CCCAAATAGAAGTGGAGAGTGAAAGAACAAAACTTAAGGTTGCAGAGGAATTGAACAAGGAACTTGAACGGGATCTGTCC CTCGAAAAGGAGCATATAAAGGAGTTACAAGAAGAGTTGAAGAAAGAGAGAGCTTCTTTGGAGCAGACAGTTCAAGAAGT GTCTTTGCTTCAGGAGGAATTAGAGAAAAGAAGTGCAGAATTTAGGGAAGCGAGTGCGCTTCTTCAGCTCAAAGAGTCAG AACTTGTTGATGCTAAGCTAGAAATCCAGCACTTGAAATCTGAAAAGGCTTCTCTTCAGGATCTCTTGGAGGAGAAAGAC ATGGAACTTTACAATGCTAGGAAGATGCTGGTGGAGGTAAGCCAGGAAATTTCTGATCTTAAGATGCTTGTGAACTGTAA AGAAACACAGCTTATTGAAGCGGCCAATATGCTCAGGGAGAAAGATGAGCACGTGAAGATCATCGAGAACAAGTTGAATA ATACAAACCTGAAGGCTTTCGAGGCTGAAACTGTGGTAAAACGAATTTTAGACCTCACTAATCAACTGGTTACTTCCATT AATGATGAAGACATAAACTCACCGAGACCTCTAGATGAAATGGGTAATCAACTACTCGAGCAACTTCTGGAGGAACCTAA TAATGATTTGAGGTGGCAACAAAAACGGCTTGAGAATCAACTTGAGCTGACCAAAGAAAGCTTAAAAACAAAGGAGATGG AAGTTCTTGCTGCTCAGAGGGCTCTAACAATAAAAGATGAGGAGCTTAAAATGACTCTTGCAAGATTGGATGCAAAAGAG GAAGAGTTCAAAAAAGCTAAGGTGGAGATGACAGAAGATGCTAATGATCTTCAAAGGCTGTATGCTTTTGCACAGGAGAG AATTGGTGAGAAAACTATGGGGGACTTGGCAGTTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTTGTA CAAGCGCTCTGCAGAAACTTGCAGAAATGAGTCGAAAACTATTGAATACGGCGATCCTGAGTGTTGAGGCTGACAACTAT ATCCTGAAAAATAAGGATAGTAACCCCAACTCAATCAAAAACATCAATAACATTGATGTTTTCAGTGTGGTAAAAGCAGG AGTTGCTCGACTTTCATCTTTGACTGAACAGCTTGTGCTAGAAGCGGGTATTTCTGCTGCTGCAAACTAG
Protein sequence (LotjaGi5g1v0059400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFSSASLRSSSYSCSSQLWCSIRCNTKQCSRGGLVVVGGRKGRSVGNGVCVVRSVLNDNRSSVGSYGGAEPARVLLERL FEQTQKLENQMSGGEQDLRGLETDLLAALTAMKEKEDHLQEVERAVVLENGKLKQAKEELERQENEIEAARTRYERLEEE MKEATGSLVSQAGQIEELKLRLRDRDHEIADVRNALFLKEEEMEKMRTDLAKKSEEAASVDSELRQKAQLLSEANEVVNK QEVELQELRRAVWEREEELQLSLALRETEEEKLKVTEANLEKQAMEWMLAQEELRKLREEASRQAQESSETLEDFTRVKK LLSDVRSELVSSQQSLASSRYKMEEQERLLEQQAAELTEQRESVMSYMDNLKYAQIEVESERTKLKVAEELNKELERDLS LEKEHIKELQEELKKERASLEQTVQEVSLLQEELEKRSAEFREASALLQLKESELVDAKLEIQHLKSEKASLQDLLEEKD MELYNARKMLVEVSQEISDLKMLVNCKETQLIEAANMLREKDEHVKIIENKLNNTNLKAFEAETVVKRILDLTNQLVTSI NDEDINSPRPLDEMGNQLLEQLLEEPNNDLRWQQKRLENQLELTKESLKTKEMEVLAAQRALTIKDEELKMTLARLDAKE EEFKKAKVEMTEDANDLQRLYAFAQERIGEKTMGDLAVEKLQLEAAQLEVEACTSALQKLAEMSRKLLNTAILSVEADNY ILKNKDSNPNSIKNINNIDVFSVVKAGVARLSSLTEQLVLEAGISAAAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 765 | 758 | 9.7E-289 | – | |
| PANTHER | 8 | 765 | 758 | 9.7E-289 | – | |
| Coils | 77 | 104 | 28 | - | – | |
| Coils | 119 | 195 | 77 | - | – | |
| Coils | 203 | 223 | 21 | - | – | |
| Coils | 231 | 258 | 28 | - | – | |
| Coils | 266 | 318 | 53 | - | – | |
| Coils | 336 | 363 | 28 | - | – | |
| Coils | 378 | 440 | 63 | - | – | |
| Coils | 448 | 482 | 35 | - | – | |
| Coils | 587 | 614 | 28 | - | – | |
| Coils | 629 | 667 | 39 | - | – | |
| Coils | 683 | 703 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0059400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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