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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0060500 |
| Transcript ID | LotjaGi5g1v0060500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16080.1 carboxyesterase 17; Swiss-Prot: sp|Q9LFR7|CXE17_ARATH Probable carboxylesterase 17; TrEMBL-Plants: tr|I1MWR8|I1MWR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0060500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10137608..10139498) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGTTGTAGGTTTGACATTTGCATGGTTTTGTTCAATTTTATAGTTATTTTTCTGAGCTATATTACTTTCTTCATGG AAAGTAACCAAGCAAGCTTAACCCTTTAACAAACAATACAATTTACATGATCAACCATACAACATTTTTAGCAAACAATG CTATTTACATGATCTACCAATGAAAATAACTGTATTATCCTTCAGCTTATGTATAAAATCTTCACATAGAGAACCTTAAA GTCACCATCTAGCCTTGAAATTTGAAAAATGTCCTTGATAGCAGAAGCACCAGATTTTCTCCAAGTCTATTCTGATGGTT TGGTGAAACGCTTTGACCCTGAAACTGTCCCTGCATCTTCCAAACCCTCCAATGGATACAAATCCAAGGATGTTGTTATT GACCCATCAAAACCCATCACCGGAAGAATCTTCCTTCCTCATTTTGAGAATCAGCAGAACCTCCTCCCGGTCTTGGTTTA TTTCCATGGTGGCGGTTTTTGCATTGGCTCCACCACATGGCTCGGCTACCATCACTTTCTCGGTGACTTCTCGGTCGCGT CCCAATCCATTGTTCTCTCCGTCGACTACCGTTTAGCCCCGGAGCATCGTCTCCCGGCGGCTTATGAAGATTGCTATGTT GCACTTCAATGGCTTGCGGAACAAGCAAGCTCTGAGCCTTGGCTTCAGGGTGCTGATATTTCAAGGGTGTTTCTCTCTGG GGAGAGTGCTGGGGGTAACATTGCACACCATGTGTTTGTGAAAACGACTCAGAGAAATAATGATGTGCTTGTCTTGAAAA TCAAAGGGTTGATGGTTATACACCCTTACTTTGGGAGTGAGGAGCGGACTGAGAAAGAGGAGGCTGTGGCTGATGATGAC AAAGAATGTGTCGCTATGAATGACATGTTCTGGAGGCTGAGTATACCGGAAGACTCGAACCGCGACTATTTTGGGTGTAA TTTTGAGAAACATGATGTGGATGCGAGTGTGTGGTCTCAGTTTCCGGGGATAGAGGTTTATGTTGCTGGTAGAGATTTTC TGAAAGAAAGGGGTGTCATGTATGCAGAGTTTTTGAAGAAGAAAGGGGTGAAAGAGGTGAAGCTTGTGGAGGCTAAGGAA GAACCACACATATTTCATATATTTTATCCTCAATCTGATGCAACTCGCTTGCTCCAGAGCCAGATGAGTCATTTCATGAA GAGATACTAAAGACAATCATGATTAAAATTTGAATAATATGAAATTCTTTCATGATAGGAAAAAAATTGCCCAAGTATGA GGCGCAATGCAGGATGATGCTCTGTTAAATGTAAGATTATTATTATATATGATGGTTGACATAATAAAGTATGCAGTAAT GATATATACACACCTCATTTTTAAAACACTTCATTCTCACCTCTTTTTGTTTCTATCTCTCTCCTCTTACCATCTATCAC ATCTCATACTTTCTCTCTCTTACTTTTCATTTTCTTCCTATCTCTCTCATCATTCCACATCTTCCACCTCAAAAAAGAGG TGTGTAAGTAACATTACTCTAAAGCATGTACGTGTGTGTTTGGCTCGGCGTTAGTAGAATTGGATCTGGCCAGAATTGGA TCTGATATGAATTGGATCTGGTAAACGTGAGTTTGAGTGACGTGATTTATGTTTGGATACATTTATCAGGAATTGGATCT GATAGACTTGAATTGGATCTGTAAAAGGGAAAGGGGACAATTGGATCAACATTGATGCTAAAGCAACAAATTGTTGTGTT AGGATGGATCCAATTCTGGGGCCAGAATTGGATCAACATTTAACATCCAAACATCAATGGAGATGGAAAAATCACGTTTG AGGTCTTTAAACGTGGATCAGGCCTGATCCAACGTGCATCCAAACACACCC
CDS sequence (LotjaGi5g1v0060500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTTGATAGCAGAAGCACCAGATTTTCTCCAAGTCTATTCTGATGGTTTGGTGAAACGCTTTGACCCTGAAACTGT CCCTGCATCTTCCAAACCCTCCAATGGATACAAATCCAAGGATGTTGTTATTGACCCATCAAAACCCATCACCGGAAGAA TCTTCCTTCCTCATTTTGAGAATCAGCAGAACCTCCTCCCGGTCTTGGTTTATTTCCATGGTGGCGGTTTTTGCATTGGC TCCACCACATGGCTCGGCTACCATCACTTTCTCGGTGACTTCTCGGTCGCGTCCCAATCCATTGTTCTCTCCGTCGACTA CCGTTTAGCCCCGGAGCATCGTCTCCCGGCGGCTTATGAAGATTGCTATGTTGCACTTCAATGGCTTGCGGAACAAGCAA GCTCTGAGCCTTGGCTTCAGGGTGCTGATATTTCAAGGGTGTTTCTCTCTGGGGAGAGTGCTGGGGGTAACATTGCACAC CATGTGTTTGTGAAAACGACTCAGAGAAATAATGATGTGCTTGTCTTGAAAATCAAAGGGTTGATGGTTATACACCCTTA CTTTGGGAGTGAGGAGCGGACTGAGAAAGAGGAGGCTGTGGCTGATGATGACAAAGAATGTGTCGCTATGAATGACATGT TCTGGAGGCTGAGTATACCGGAAGACTCGAACCGCGACTATTTTGGGTGTAATTTTGAGAAACATGATGTGGATGCGAGT GTGTGGTCTCAGTTTCCGGGGATAGAGGTTTATGTTGCTGGTAGAGATTTTCTGAAAGAAAGGGGTGTCATGTATGCAGA GTTTTTGAAGAAGAAAGGGGTGAAAGAGGTGAAGCTTGTGGAGGCTAAGGAAGAACCACACATATTTCATATATTTTATC CTCAATCTGATGCAACTCGCTTGCTCCAGAGCCAGATGAGTCATTTCATGAAGAGATACTAA
Protein sequence (LotjaGi5g1v0060500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLIAEAPDFLQVYSDGLVKRFDPETVPASSKPSNGYKSKDVVIDPSKPITGRIFLPHFENQQNLLPVLVYFHGGGFCIG STTWLGYHHFLGDFSVASQSIVLSVDYRLAPEHRLPAAYEDCYVALQWLAEQASSEPWLQGADISRVFLSGESAGGNIAH HVFVKTTQRNNDVLVLKIKGLMVIHPYFGSEERTEKEEAVADDDKECVAMNDMFWRLSIPEDSNRDYFGCNFEKHDVDAS VWSQFPGIEVYVAGRDFLKERGVMYAEFLKKKGVKEVKLVEAKEEPHIFHIFYPQSDATRLLQSQMSHFMKRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 312 | 312 | 3.6E-148 | – | |
| PANTHER | 1 | 312 | 312 | 3.6E-148 | – | |
| Gene3D | 9 | 313 | 305 | 3.1E-69 | ||
| SUPERFAMILY | 15 | 311 | 297 | 7.69E-53 | ||
| Pfam | 69 | 290 | 222 | 2.1E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0060500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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