Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0065100 |
Transcript ID | LotjaGi5g1v0065100.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | FLOWERING PROMOTING FACTOR 1 family protein; TAIR: AT5G10625.1 flowering-promoting factor-like protein; Swiss-Prot: sp|Q9LXB5|FLP2_ARATH Flowering-promoting factor 1-like protein 2; TrEMBL-Plants: tr|I3SVM6|I3SVM6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0065100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10887016..10888305) extracted from Lotus japonicus Gifu genome v1.2.
ATTCTTAAGAAAAAATAAAGACCTTAGGCCCCACCTATCTAGATTCTATGCCAACATGCTCTATCATAACCCAACTTTTA ACTCTTCCACTTCCAAGAGTATTTTTCTTTTGTTTTATTTTGCCCTCTTCCCCTTTTGACACGTATATATACCCTCTCTC ACCCCTTGCATTCCTCAACAAACACAACAACAACCAAAACCCCTCTATCACTTAATTTCTTTCCCTCTCATCCTTTCTCC ATGCCCATCTTTTGCTTCTCCAAATCACAAACATAAACAAACCCTCAAGAAGCAGACCCACAAACTCAAAAACACCCATC AAATTCTGAAAGCCCGCATCGTTTAGTTATAATAAAAGATGTCTGGAGTTTGGTTTTTTAGGAATAATGGGGTAATGCAG TTGGTTGAGAACCCTCAAGCAGAGGGCTCAGAAGCAAGGCAAGGTTCAAAGAGAAAGGTGTTGGTTTACTTGCCAACAGG GGAAGTGGTGAATTCCTACACTTTTCTGGAGCGAATCTTGATTGGGTTAGGGTGGGAGAGGTACTATGAAGGAGATCCTG ACTTGTACCAATTCCACAAGCACTGCTCCATTGACCTAATCTCTCTCCCAAGAGATTTCTCTAAGTTCAGCTCCGTCAAT ATGTATGATATTGTCATGAAGAACCCCAATGTCTTCCATGTCAGGCAAGTGAGTGTGTCTTGATCATTTCGATTTTCGGT GCCGGGGAGATTTTTCTTTTTTCACTTTTTTTATCTCATGCTGGTGTGCTTCTATATATATCTAGAGTTTGTGGAAACTC TAGTGAACTTGTTGGGTTCTTTTGCTTTCTCTTCATAAGGGAAAATAAGTTTAGATTATGCATCTTGCTGATGCATGACT AGTGTACATGTGCTTGGGGTGCTATGTAACATATATAGTAAGTATTGATTTCTAATAACCTCAGTCTATGCATTGCGTGG ATTTCTGATCTATGTGGTCTACTAAATATATACCAACTTTTTTTGGGCTGATAAAAATTTGGGTGGATTTGGCTTTTGGA CGTCACCGCAACTGGTAAGACATGTCTCTAAAATCATATATCATTTGCATACGTGTTTACGGATTGTCCACTAATACAGC TCTTACATCTGCAATGAAAATCAAACCCAAAACTTTCTGAGAAGAAGTGATTTTTTTTGTTAATTAAATGTGTTGGTTAC TATACACCAACTTGGGAAAGGGAATTTACATATATTTTGCGTAGAGGAGATTCAGGGATCACTTCCTGACGGGTGCAATT TATCTTTCCG
CDS sequence (LotjaGi5g1v0065100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGAGTTTGGTTTTTTAGGAATAATGGGGTAATGCAGTTGGTTGAGAACCCTCAAGCAGAGGGCTCAGAAGCAAG GCAAGGTTCAAAGAGAAAGGTGTTGGTTTACTTGCCAACAGGGGAAGTGGTGAATTCCTACACTTTTCTGGAGCGAATCT TGATTGGGTTAGGGTGGGAGAGGTACTATGAAGGAGATCCTGACTTGTACCAATTCCACAAGCACTGCTCCATTGACCTA ATCTCTCTCCCAAGAGATTTCTCTAAGTTCAGCTCCGTCAATATGTATGATATTGTCATGAAGAACCCCAATGTCTTCCA TGTCAGGCAAGTGAGTGTGTCTTGA
Protein sequence (LotjaGi5g1v0065100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGVWFFRNNGVMQLVENPQAEGSEARQGSKRKVLVYLPTGEVVNSYTFLERILIGLGWERYYEGDPDLYQFHKHCSIDL ISLPRDFSKFSSVNMYDIVMKNPNVFHVRQVSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 110 | 110 | 1.2E-58 | – | |
PANTHER | 1 | 110 | 110 | 1.2E-58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Regulation of flower development | Any process that modulates the frequency, rate or extent of flower development. |
Expression pattern of LotjaGi5g1v0065100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…