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LotjaGi5g1v0069400.3

Overview

Field Value
Gene ID LotjaGi5g1v0069400
Transcript ID LotjaGi5g1v0069400.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Inorganic pyrophosphatase protein; TAIR: AT3G53620.1 pyrophosphorylase 4; Swiss-Prot: sp|Q9LFF9|IPYR4_ARATH Soluble inorganic pyrophosphatase 4; TrEMBL-Plants: tr|I3T412|I3T412_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0069400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:11488701..11491103) extracted from Lotus japonicus Gifu genome v1.2.

TTTATTAGGTGGAAATTTTGTCCAGAAAATGTGATGATGGATCTGATGAAATTTGTTGTTTATTATTCCAGATTGCGGAT ATGGCTCCACCCATTGAGACCCCAATCAAGGTTGCCAACTCTCAGAATTCCCAACATCCGCCACTTAATGAGAGGATTCT TTCATCCATGACTAGGAGGTCTGTTGCTGCACACCCTTGGCATGATCTTGAGATAGGTAAGCGAGATGTTAGCGAATCGA TTACAATGTACTGCTTCTCTGTTTCTCATACTCTCTGTGAGACTTTATTTGGAATGCTAATTGTACTTTTTCCATAATGC AGGACCTGAGGCTCCAAAGATCTTCAACTGTGTAAGCATACTGAATATAAACTTACTTAGCTTAGGAAGACTTGAGCATC ACTGGCTTGCTTAGTTGATGACTAGCCATGTGCTCTCCGTGCCCAAATATTAAAAGATCATTACATGTTTTACTGAGATT TGGGTTACCGGTGATTAGAATCAAGAACATATTAGATAATGCTGACATAGCTGATTCCATTTCCTTCTCAGCTTTATGTA GTCAGGCATTATCATTATGAGACAAAAAAACATGACGTTGTAAAGTTGTACTGTAGGTTTAAGCATGTCTAGCATTAACA ATGAGTCAAGTACCCAAAGAAAAGTCCTCTACTATATTTTTCTTGTTTCTCCCTTTCTCCCCCCCCCCCCCCCCAAATGC TATAGAATGTTGTTTACGATTTTTTCCAAAATTGCAGTGCAATTTTTTCTATTCACAACTTGATAACTACTCTCTTTGAA CTTTCCTGAGTTTGCATATCATGTCATGAGCTTGAATTGTTATTAACCGACATTGAACGAGATCATTATTGAAAAAAACT GATTTGAATACTTCCTTTGTGAAATATGACTGAATCTTGCAGGTGGTTGAAATTGCGAAAGGAAGCAAGGTGAAATATGA ACTTGACAAAAGAACTGGGCTTATTAAGGTAGTTTTGGTTTCGTAGATTTTCTCTCCTTGATATACTTGTTGCTACAGGA CATTGCTGAACATGCATCTACATGCAGGTTGACCGTGTTCTTTACTCATCAGTTGTGTATCCTCACAACTACGGGTTTAT CCCACGTACTATTTGTGAGGACAGTGACCCCATTGATGTCTTGGTTATTATGCAGGTACTCACTTCCTCTTGCAAATTAG TTTCCCTTTTGTGATTTACATGATGTGTGCAAAAATGCTCATTAGATATTTATGCAAACCTGTTCTCAAATCAGTATTCC TTTTGCGAGTTATGCTAATTGCCTAGTTATTTGCTGACTTCTGAAGTAAGCAAAGCTGTCCAAAGCTAGACTATCTACTA TCCTTATTTTGGATTGTTCATCATTCTGTAATCTGTACCAGAGTTCTTTGCTATACAGTTTATCAAATTTTTCTTAGTAG AAAGCTTGTAAAAAGGAGATTGTATAATAATAATAGTAGTCCACGAGTCCACATTTTCACTAAACTCTCTTCAATTACAT TTTAATAATTTTCATGATTCGAGTATCTTGTAAAGTAATCTTCATCAATTTAAAATCCTTTACATATTGACCTTTGTCTT TATTGCCAAACTATGCACTGACTATCCAAAGATTAAGCCACAGCTCAAGGTGTTCTCCATGTGGATATGTTAATAAAATC TCACAACATGGCTACTGTAATATAATTTCATAGTATCACATAGTAGTAATTAGATGAGAGGATCTAGTTATAAAATGACT TCTGAGTTCTGACATTCTCCAAATCAATATGAGTGGCAAATTAGAATAGTCTTCTGCTCTGTCAATTATGTAAGTGCACG TTTGTTGATCATCTTACATTTTAGATCTAATTCATGAGCTGCGTCTATAATGCTTTGATTGATGTGAAGTCTTTACTCGA ATTTAACAGGAGCCAGTTCTTCCTGGTTGCTTTCTTCGGGCCAAAGCTATTGGACTCATGCCTATGATTGATCAGGTATA TCAGACATTCACTTTTCTAACACGGCAATGTTTTCTCTTTTGAATAATTGTCCAACCATTTATTATGAAATTCAGGGTGA GAAAGATGACAAGATCATCGCTGTCTGTGCTGATGATCCCGAGTATAGGCATTACAATGATATCAAGGACCTTCCTCCAC ATCGTTTAGCTGAAATCCGTCGGTTTTTTGAAGATTGTATCCTTCTGAAAGTTTCTAATTTTGTTGTTTGGTCAATACAT TTTATTTGTTTGCATCTACAACTTTGACAAGCTTATGTATAAAACTATTCAACAATTTTCCTTAATAAAGGAATTAGACA AGAAGAATGAGAACAAGGAAGTTGCAGTAAACGACTTTCTTCCTGCCTCAACTGCCTTTGAAGCAATCAAGCATTCCATG TAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0069400.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCCACCCATTGAGACCCCAATCAAGGTTGCCAACTCTCAGAATTCCCAACATCCGCCACTTAATGAGAGGATTCT TTCATCCATGACTAGGAGGTCTGTTGCTGCACACCCTTGGCATGATCTTGAGATAGGACCTGAGGCTCCAAAGATCTTCA ACTGTGTGGTTGAAATTGCGAAAGGAAGCAAGGTGAAATATGAACTTGACAAAAGAACTGGGCTTATTAAGGTTGACCGT GTTCTTTACTCATCAGTTGTGTATCCTCACAACTACGGGTTTATCCCACGTACTATTTGTGAGGACAGTGACCCCATTGA TGTCTTGGTTATTATGCAGGAGCCAGTTCTTCCTGGTTGCTTTCTTCGGGCCAAAGCTATTGGACTCATGCCTATGATTG ATCAGGGTGAGAAAGATGACAAGATCATCGCTGTCTGTGCTGATGATCCCGAGTATAGGCATTACAATGATATCAAGGAC CTTCCTCCACATCGTTTAGCTGAAATCCGTCGGTTTTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTAAA CGACTTTCTTCCTGCCTCAACTGCCTTTGAAGCAATCAAGCATTCCATGTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0069400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAPPIETPIKVANSQNSQHPPLNERILSSMTRRSVAAHPWHDLEIGPEAPKIFNCVVEIAKGSKVKYELDKRTGLIKVDR VLYSSVVYPHNYGFIPRTICEDSDPIDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKD LPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEAIKHSM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 21 21 - –
PANTHER
PTHR10286:SF59
11 203 193 3.2E-124 –
PANTHER
PTHR10286
11 203 193 3.2E-124
IPR008162
SUPERFAMILY
SSF50324
31 202 172 1.2E-67
IPR036649
Gene3D
G3DSA:3.90.80.10
37 203 167 8.5E-75
IPR036649
Hamap
MF_00209
51 203 153 29.34
IPR008162
CDD
cd00412
52 203 152 6.97531E-87
IPR008162
Pfam
PF00719
55 202 148 3.5E-54
IPR008162
ProSitePatterns
PS00387
102 108 7 -
IPR008162

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0004427
Molecular function Inorganic diphosphatase activity Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006796
Biological process Phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0069400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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