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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0078000 |
| Transcript ID | LotjaGi5g1v0078000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit G; TAIR: AT3G01390.1 vacuolar membrane ATPase 10; Swiss-Prot: sp|Q9SP55|VATG_CITLI V-type proton ATPase subunit G; TrEMBL-Plants: tr|A0A151R0B3|A0A151R0B3_CAJCA V-type proton ATPase subunit G; Found in the gene: LotjaGi5g1v0078000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12778162..12778955) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCATCCAATAGAGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGC AAAAAATGGTATTTTTTTTTGTCTTCATAACATTTCATATCTGATATGTGTTTGCCAAAAATTCATTCAATTTTTGGTCA AATAGTCCATCTTCATTAAATTTTGTCATACTAAGCCACTTATGTTGAAAGAGTTATGTTCTCCTCTTTATTATTTTTAT CGATTGATCTTCTCATTCAAATCTGGAAAAGGATTTATTGTTTGCATGAGTTTGTTTGTCTCCTCCTAATAGAACAAATT CTCCGATTGAAAATCACCTTTATTTTTCGTTTTGATTGTTAATCACTTAGTTGTATATTTTATGACAACTCTTTCCTGTA AACTTACCAATGGCATCCTTTGTATCTCCACCGTTAGAAAAATTGGCTAGGTTGAAACAGGCTAAGGAAGAGGCTGACAA GGAGATTGCTGAATACCGAGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTTTCAGATGTAAGTCTATTCTATTTGATTA TGATAACTACAGCTGTTAAGCCATCCTTATTATCTTACTTTGACATGTGATGGGTTTCCAACTTCTATGCATGCTTTACC ATGAATGCAGAGTAGCGGAGATTCCGGAGCTAATGTGAAGCGGCTTGAGCAAGAGACTCAAGCGAAAATCCAGCACCTGC AAACCGAGGCTGCAAGAATATCGGATGATGTTGTCGCTATGCTCCTTAAGTATGTAACAACTGTGAAAAATTAG
CDS sequence (LotjaGi5g1v0078000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCAATAGAGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGC AAAAAATGAAAAATTGGCTAGGTTGAAACAGGCTAAGGAAGAGGCTGACAAGGAGATTGCTGAATACCGAGCTAAGCTAG AGCTTGAGTTTCAAAAGAAAGTTTCAGATAGTAGCGGAGATTCCGGAGCTAATGTGAAGCGGCTTGAGCAAGAGACTCAA GCGAAAATCCAGCACCTGCAAACCGAGGCTGCAAGAATATCGGATGATGTTGTCGCTATGCTCCTTAAGTATGTAACAAC TGTGAAAAATTAG
Protein sequence (LotjaGi5g1v0078000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQ AKIQHLQTEAARISDDVVAMLLKYVTTVKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 62 | 62 | 1.9E-18 | – | |
| PANTHER | 1 | 110 | 110 | 7.7E-55 | – | |
| PANTHER | 1 | 110 | 110 | 7.7E-55 | ||
| TIGRFAM | 3 | 109 | 107 | 9.2E-24 | ||
| Pfam | 7 | 109 | 103 | 3.5E-33 | ||
| Coils | 10 | 59 | 50 | - | – | |
| Coils | 76 | 96 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase complex | A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi5g1v0078000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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