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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0082300 |
Transcript ID | LotjaGi5g1v0082300.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Acylphosphatase; TAIR: AT5G03370.1 acylphosphatase family; Swiss-Prot: sp|A5VFP2|ACYP_SPHWW Acylphosphatase; TrEMBL-Plants: tr|A0A072VL74|A0A072VL74_MEDTR Acylphosphatase; Found in the gene: LotjaGi5g1v0082300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:13694440..13696091) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTAATTAACAATGTCGTTGCGAATAGCTTCAACCACGATTAGGATGATTCACCTGAGACCCAGATTCCTCGCGTAT TGGAGCAATCTCAGCATCAAATCTGCTTCAAGAAACTTCCATTTCCCTCATTCAAACCCTTCTTCGATTCATCTCTCTCT CCCTCATCCTCCCCCTCGCTCTCTCTCTGCAATGACAACTCCTCAACCTTCCTCCGACTCCAAAACGGTGCGCAGAGCCA AATCGCCAAACCCAATAAATTTTTCTTCTCTTTTTTCAATTTACTGATGATGATTGTTTGTGTGATGGTTTTGGTTTTGA ATGTGGTGCAGGAGAGAGTGGTGATAAAGGGGAGGGTACAAGGGGTGTGGTACAGGAACTGGACGGTGGATAATGCGACG GAGCTAGGGCTGAAGGGGTGGGTCCGGAACCGGAAAGATGGGTCAGTGGAGGCTCTGTTCTCGGGGAAGCCTGATGCGGT GAAGGAAATGGAGCAGCGGTGTCGGCGTGGACCGCCGGATGCCGTCGTCACGGGCCTTGAGGTTTTCCCCTCTGATGATG ACCCTGGGACTGGATTCCAGCGGAAACAAACTGTTTGATCAAATGCTTGAATCGTGCCTGCGCTTGGTTACTACATTATA GGTGTGTTTTGATCTTGTTTTTGATGTAGCTAGTTGATGATTCTACAGAATTACATGTAATATTTCACTAGGAAATCAAT GATTTTCAAATTGTATTGCTTTTCTTTTTACAAGATGATTGGATTGGATATGTGAGGCTGCAGATTGCATTGGTTCCTTA GCAGCACAAGTAGTGTAGTGTATGTGTTCAAAAGAGTGTGTGTGTGTTGCATATGAGAAACTTTGTAATGTTATTACAGT TGAGCCGGACTCAATCTGCTTGGCTATGAGATGGATGAGATAAAAGTGGCTTATAATCGTCTCGACTGGCCATCATGAAG TGTACTTGACTGTGGATCCTTTACTTGGACGTTACTTTGCTTGATAGGCTTTTGTGGCCGACCAGAACAAGAGCCTCCAA CTTGGAATCTAATGTACATGGGCCGACTGGAACATGAGCCTCAAGTTTTAACAAGTTTACTTCATATGAAATGTACTAGA AGCTACACAAACATTCAAAGGTAAAAACAATTTTTTAAGGTGCTTACTTTGAACTAGTGTCTGGCCGAGATGCAATTCAT CTATTCTTAATCATCGTCATTCGGTTCTTTGTAAGACTTCTTTTCTTTTCCATCTTGAAACATCATCATGATTAATGAAT AATCGTATGTTGCAGTTATGACTTAATCATAAAGACATGTAAAAATGTCGCGACTTTTATCATATTGTTATTTTGAATTT TGTGTTTTTCTCTAGGTTTCGTATCTATTTGTATTATATTCCATTTACTTTTTATTTTCTTAATATGGGGAAAAACATTC TCAAAGATTTTAGTCTCCTAAATTTCAGGAATTTTGAAGGATTCATTTAAGTTTTTTACCAACCCCCTAGTAACCCCTTT AGAATCTTCTCTCTACAAGTATTACTTCATCCTCTTTACTCCCTTTATTTTTCAAATGACAAGGTAAACATGTGTGAAGG GGTTATTATAGATAATCCGCTAGCAATTGACATTGCATTAGGCCCTCTGTAG
CDS sequence (LotjaGi5g1v0082300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTTGCGAATAGCTTCAACCACGATTAGGATGATTCACCTGAGACCCAGATTCCTCGCGTATTGGAGCAATCTCAG CATCAAATCTGCTTCAAGAAACTTCCATTTCCCTCATTCAAACCCTTCTTCGATTCATCTCTCTCTCCCTCATCCTCCCC CTCGCTCTCTCTCTGCAATGACAACTCCTCAACCTTCCTCCGACTCCAAAACGGAGAGAGTGGTGATAAAGGGGAGGGTA CAAGGGGTGTGGTACAGGAACTGGACGGTGGATAATGCGACGGAGCTAGGGCTGAAGGGGTGGGTCCGGAACCGGAAAGA TGGGTCAGTGGAGGCTCTGTTCTCGGGGAAGCCTGATGCGGTGAAGGAAATGGAGCAGCGGTGTCGGCGTGGACCGCCGG ATGCCGTCGTCACGGGCCTTGAGGTTTTCCCCTCTGATGATGACCCTGGGACTGGATTCCAGCGGAAACAAACTGTTTGA
Protein sequence (LotjaGi5g1v0082300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLRIASTTIRMIHLRPRFLAYWSNLSIKSASRNFHFPHSNPSSIHLSLPHPPPRSLSAMTTPQPSSDSKTERVVIKGRV QGVWYRNWTVDNATELGLKGWVRNRKDGSVEALFSGKPDAVKEMEQRCRRGPPDAVVTGLEVFPSDDDPGTGFQRKQTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 24 | 159 | 136 | 1.7E-59 | – | |
PANTHER | 24 | 159 | 136 | 1.7E-59 | ||
MobiDBLite | 42 | 73 | 32 | - | – | |
Gene3D | 51 | 157 | 107 | 4.0E-28 | – | |
ProSiteProfiles | 71 | 157 | 87 | 28.686 | ||
SUPERFAMILY | 71 | 154 | 84 | 1.13E-24 | ||
Pfam | 73 | 154 | 82 | 2.4E-22 | ||
ProSitePatterns | 100 | 116 | 17 | - | ||
MobiDBLite | 130 | 159 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Acylphosphatase activity | Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate. |
Expression pattern of LotjaGi5g1v0082300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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