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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0099200 |
Transcript ID | LotjaGi5g1v0099200.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Bifunctional purine biosynthesis protein PurH; TAIR: AT2G36145.1 hypothetical protein; Swiss-Prot: sp|C5FUK3|ADMB_ARTOC Disintegrin and metalloproteinase domain-containing protein B; TrEMBL-Plants: tr|I3SRM5|I3SRM5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0099200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:17826638..17831377) extracted from Lotus japonicus Gifu genome v1.2.
GGATGGAGCAAAATTATTGACATCTAACAAAATTATAAAAATACAAATATGTCCCTTAACCACCCCCTTATTACTACCCA GTTTCTTTCACGCTCATTTAGACCCTATTGCTTCTTTCGTTGCAGTTTCCACATTGCTGCATTTCTACATCACTACATCT ACATGGGTCTTGGTTTTTTATAATGAACCTTTCTCTATCTGCTGCGTTGCTGGCTTGTTTGTTCCTAATAATTGCTTTTA ACTTTGTGTCATTGTTGAATTCCTTCCCGTGTTCAATTCCTTGCTGCATTATTCAATATGTTTTGTTAAATATTATTTCA AACACAGGCTTTTGTAGGTATATGCAATCAATTTGTAATTTTTATTGGAAGCTGAAGCATCTCGTAAAAAAAAAATTAGC GTTTTGTGTTAGATTTGGGTTTCTGGTATTTTTTATTAATGTTTTCTCCATTCATGATATCCCGTTACATTTTTTAGACA TGTCAAAATTTGAAAACAAGACTAGCTAATGCTCCAAGAAAGAAAGTAAGGGTAATATGGTACTAAAAAATTTGTAACTT ATTCTGCTCCATTCATTATCCAAACAATGGAGTAGTAACTTTGCTCCGTTCCATCCTAAAATACCCAAACAATGGAAGGA GACTTTTATTCCATTCCGTTCCGCTCCATTCCATTCCATTATATTCCATTCCGCTCCGTTCCGTTATGTTCCATCAATCC AAACATAGCCTTAAGAGGCTGGAAAATATAGTTGGGATTTTGGCAGTACTTGCCAAACTACATAAGAAAATGTGTTGTGC AACCAGATACACTTGTGTGGAGATCGGTGGTTGTGTACAACTCATCCAGTTCTGGGTCTAAACCAGAATTCCTGATGTTG GCCCTTCTAAAGACCTTTTCCCTATCATCGAAGGTTGCGCTCTTCGAGCTAGGTATGCACATAATTGTTACTTCAAATTT GAATACTTGTTCAAATTACAGCCTTCTGACATATACACCTAATGTTTCTATGTAATACAGGTGAAAAGAAAATGGTGAAT GGATGAAGTATTTGTTATTTTGGTGGAGGCACAAACTTGACACAACTAAAACTGAACAAGTGAGTACATATCATTACAGT TATACTAATTGATAGATGCTTGTCCAAGTATTAATTTTTTCTTCTTCTTCTCTTTTTTATTATTATTGTGGATGCAGTTT GTGTGAATGCTTTATCCAGACAGTGTTATGGGGAAGCTACCTCCACGATGTCGAGAAAATATCGGTTTGTGGAAGTGTAT AGCACCAATGATATGCTTTTATATTGTTGAATGACATCAACCCGATCGAGTGATGCAACAATTTGGAATGCAACATCAAT TGGTCTTGTCTCCCATCAACAAAGCTTCCTCGTGCTTCCCCCACACGGAATTCGCTTCCAGACATGGGAATTCAACACAC GGTTTCAAACAATTGCAGCATATGTTGCGCTACACATGGGGCGAATTCACATTGGGATTGCTCAACAATCCTACCGTTCA AATCGAGGTTCTCGATGTTTAATTTTTCATTGTTATGTTAAAATAAAAATTTTTTTAAACCCCCAAATTTTACCCTTTAA TTCTTGGACTTTCCTATTCTCAGCCCATTATATCATCAAATTCTTATCACCTAAAACTATCATTTCAGACACTTAAAAAA TTTGACAAAAAAAAAAAGAAACTTAAAATGAACAATGAAAGTGCATAAAATTGTGAGTGGCGGGGCGAATACTGTTGTTA CCAGCTACGTGGGTCTCTCGAGAGCCATTTGCTTTTGAAACAAAAGAATCTTGTAGCTGAAACCTGAACACACAACAGAA AATAATCACATGAAGCCTTATCCACTAGACCACTACCATAAGATGAAAAAGAAAAGAAAAATTATTCTAACAACACCAGC TACTCACTTCACCTTAGCGACACCTCTGTAGGAAAAACAATGGCATCACCGTGTTCGTGTGGCATTATAAGGCAAAGTGT GTTCATGATGAAGCTGAATGGAGTGAGTTCCCAATTTCCACTGTCTTCTTCTTCTCCTTCTTCCCTTATTCAAATTCACC ACTCGTCTTCCTTGATTCGCGACCACATTCATCTCACGGCGGCGAAATTGAAAGTAGTGCCTAAAGCCACCGCGGCGAGT GGCAGCTCCGTGTCTCCGAGCAACGACGACGATGGAGTCTCTCTTGGCACCATGAAACTGCCTCTCAACATTGACCTTCA GAGATTCGATGCCTTGCTGTTTCAGGTAAACGCGTTTAGTTAATGTTAGAAGTCTCATATTCGCTAGAGATATGGTGAAT CTAAGTGTTTATAAAAAGTTGGGCAGCAACCCTCAATTCTTAAACTAACTTTTGGGTTGAGTTAGACCTACTTCGTACCG TGTTTGGTTGAGCTTTTACAAAGCAATTAATTTATGTGTATTTGGAATGTTTCTTTCATGATAATCGAAACCACTTCACG CCGTGTTTGGACAATTTTGATATGCTGCTGATACAAAACCTAGCTTGTGTTGTGGATCTTATTACATTATCGAATTTCAC ACTATTAGAAATGATAATATAAAACCATTCATGCGGCCCTTAGCTTAAGCTTTTGAGATAATTGGTTGCTTGTCACACAC ATTACCTTACAGAAATTAATTTTTTTTTCTTTTCAAAATTGTATCAAGATATGCAATTACTTCTTTTAACTCACTCTACC ATGATCAGTTTTACTAAAACCAATTATAATCAAAATCAATTCTTACAATGCTGATGTAATTAAGTTCCAAAATCAATTCT AGCAAGAAGTATAGATTGTAGCTTTTTGGCCAAACTGCACTGAGTTTTATGCCAACCACTCAACTAAATGCACACTCAAT CCTTGCATAAACAAATTTGGTGATAAGTATATATTTTGAGGCTGGGACTAATCTAATAACAAAAGTCTTATCAAGATTGT AGACTTTAGAGGACTAAAATGAGGATTTACTCGAATTTTTATTGGAGTTTCTTTTTTCGAATTTATTCAATCATTGGTTA CTTTTTTATTTACATGCTTTTTCATACCTTTGTTCTTGGTTGTGTTATGACAGTGGGCAAACAGCCTTTGCCAGGGAGCC AATCTTCCACTCCCCATGCCTCTCAAGGTACACATGTTCTTTCTTACAGCATTTCATTTTGTGCTCCTTTGTGTTTGTAT TAGCTCACTTTGATGAAGTAATCGCTTATTAATTTTGGAGCTTGAGGTAAAAGTAAAAAAATGATGAGTTCTCATTTTCA GTCATTTCCCAAACATGTGCTAAACTTAACGAATAAGCATTCTTCTGTTATAACTTATAACCCATATAATAAAGTTTGGT CATGTTTCTAGGCTCTGAGCTGTTATAATCCCACAAATGTTTGTCTTGTCTAGTATGACTAGGTATATTTATGTCTTACC ACATCGAAGTCGCATTGCTAGAGGGGTCTATAATAAGCATACACTTCTCATTCTAAAAGTTGTGCATAGCTCCTTTGTGC ATTGTTGTTTAAATTTCCTGCTTGAGTTTAGTGGGTGGGCCTAATGAAGGGAGGCAGCAGTGTGAGATTAAAATCAATTT GATTTTTCACTTCTTTTCAGAGATGGCTCTATAATGGGATAAGTTTTACAGAGCAAATCTTGCTTTCTGTCTGCATTCCC CAGTAAATGTCTGAGTTAGGCGGTCAGCGACGTAGTCTCAAGTTATTCTTTATAGAAATCTCTTAAAGAACATTGATCTG ATAAGTTTATTTTCAATTAATGTTAAGAAAAAACAACTTTCTGCTAAACTGTGCTTTATGTTGTTCCCCGAGTTCATGGC AGATAGCTTTTATACTCTGAGCAATAGGGAAATGATTGAATCAATGTCATAACTATTTGTTTGAAACAAACATTAAGAAA TTTCAAATTATGGATGCTTGTGGGTTATCTATAACTCAGGTCAATCGGTAACCACTAACCGGTAACCACTCTAATAAGAT GAATGCTCATTCAGTGCTTCTTGAAGCATGTAATAGTCTTCATTTCAATTAAACAGGTGGACAAAATACCCTTTGGAGCT AGATTGGGTTTTATCACCATTGGAGATGGGGAAACAGAAGTTCTTGTGTATATTGACTGCGTGGTTTCTCCATCAACTGA CAGTTCTGCTCCAATTTTCCGTGCCATTCGAAATGGCCCCTTGAAAGATAAGGTGCCACCTGGTGAGCCCAGAATAATGA GGAGCCTTATGCAAGCTCTTCAAAAGTCAGTTGAAATCTCTAGATTGTGAATCTTTTTTTTTTGGGTTTATCTATTGTAC TTGTAAAATTTTGAGCTGAAAATTAAATCATAAGAAGTTTGAATTTGATGTATATATATTCAGTCCGCTTAAGTTATCCT ATATTATGTCTATTGACAGAAGAGACCAACGTTTTGTTTGAACTGCCAAGGTGATTTCTGCATCCAAACTGTAGTTCTAC TTTGGCTTAATTCCAGTTTGGGTCCCTGATGTTTCAGAAAGGTGCGGTCTACACCCCCCTTGTATAAAACTTGCGGTCAA GGTCCCTCAGACCCTCATGATTCTAGAACGATCTATTGAGGCCCTTCCGTTAAGTTCCGTCAGTTGACTAAACGGAACTC ACTGACGGCGCATTTATTATTATTTTTTATGTTTAAAACAGAATTATTAAATTCATCAGTGACAGAAATAATCTGTCACA AAGGAAACAGAGGAATGCCA
CDS sequence (LotjaGi5g1v0099200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCACCGTGTTCGTGTGGCATTATAAGGCAAAGTGTGTTCATGATGAAGCTGAATGGAGTGAGTTCCCAATTTCC ACTGTCTTCTTCTTCTCCTTCTTCCCTTATTCAAATTCACCACTCGTCTTCCTTGATTCGCGACCACATTCATCTCACGG CGGCGAAATTGAAAGTAGTGCCTAAAGCCACCGCGGCGAGTGGCAGCTCCGTGTCTCCGAGCAACGACGACGATGGAGTC TCTCTTGGCACCATGAAACTGCCTCTCAACATTGACCTTCAGAGATTCGATGCCTTGCTGTTTCAGTGGGCAAACAGCCT TTGCCAGGGAGCCAATCTTCCACTCCCCATGCCTCTCAAGGTGGACAAAATACCCTTTGGAGCTAGATTGGGTTTTATCA CCATTGGAGATGGGGAAACAGAAGTTCTTGTGTATATTGACTGCGTGGTTTCTCCATCAACTGACAGTTCTGCTCCAATT TTCCGTGCCATTCGAAATGGCCCCTTGAAAGATAAGGTGCCACCTGGTGAGCCCAGAATAATGAGGAGCCTTATGCAAGC TCTTCAAAAGTCAGTTGAAATCTCTAGATTGTGA
Protein sequence (LotjaGi5g1v0099200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPCSCGIIRQSVFMMKLNGVSSQFPLSSSSPSSLIQIHHSSSLIRDHIHLTAAKLKVVPKATAASGSSVSPSNDDDGV SLGTMKLPLNIDLQRFDALLFQWANSLCQGANLPLPMPLKVDKIPFGARLGFITIGDGETEVLVYIDCVVSPSTDSSAPI FRAIRNGPLKDKVPPGEPRIMRSLMQALQKSVEISRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 9 | 196 | 188 | 3.0E-78 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0099200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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