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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0104900 |
| Transcript ID | LotjaGi5g1v0104900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thymidine kinase; TAIR: AT3G13470.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|A0LPA9|G6PI_SYNFM Glucose-6-phosphate isomerase; TrEMBL-Plants: tr|V7BIR9|V7BIR9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0104900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:19626334..19627794) extracted from Lotus japonicus Gifu genome v1.2.
CACCGCATCACCTTTCTCTCGTGGTATATAAAGTGTTAAACCCCTCTCATTCTTCCTATTCATCATCACGCAAAGAACCA AACCGAGCTAGCTAGCTGTGTAGCTAAAACATGCTTGACGGTGAAAACGTGCCACTCGCCGTCGTCTACTCCGACGGCGA CAAAGAGACCAACGTCGGCACCGTTGCGGTGGGTCCCACCCTGGGTTTCAAGAGGCTCCTCTCCCTCCTCAGCCAGAAGG TCGGGATCTCGCCGCCTCAGTTTTCTGTCTTTCTCGCCAACAACAGCAGCGACTGGAAAATCCCCCTCACCGCCAAGTTC AACTTCGCCGCCGTGCCCCTCGACGGTGGTGACGGCGACGGCGGTTACTACTTCCTCGTCAGGCGGGCAAAGCGGTACAA GAAGTCTGCGCCGAGCTGTAAGAATCCGCCGGAGAATGTCGTTCTCCTACGCCGGGAAGCTGCCGCCGGCGACGGCGTCG GAGGAGACAACCAGACGCCGCTAACCGCGCTCAGGCCAACGTTTTCGGCGCCTCCGATTCTGGATCCCGCCGAGTACGTG AGGAAGGTGAGCAATTTGTGTAAAGAGAGGGAGTTGTTCTTGATGAGCATGGGAATCAACGGCGAGCCCGTGAGAAAGGA AGTGCCGAACAGCGGCGGCGGAGGAGGAGAAAGTGGCGGTGCGGTTTGTCGCCAGTGTCTTAAGGCCATGCGTAAAGGAA TTAAAGCTAGTTTCCATTTATGCGTTAACGATGAGGTGGTAACGGCGTTTCGGACGACGGCCGGACCAATTTCCCGGCCG GTGAAGAATTCCGGCGAGGATTGCTCCTAATTTCTGTGGCGGTTTTCTCTCTCCTCTCGAGGGTAAAAAATGTGGATAAA TTATTGAATTAAATCTTATACTCAGGTGACTATATACTTGGTATATGACAATCTTGCCCCTCGTCAAGAAGGACTTTTTT AATCATTGGATCAATGAAGAACTTGAGGACTGTTTTGTACTTTTGTTAATGGTTGGTTTGTAACTTTGGTTATGGGTTGT TTTCCATGTTACTTGCTGGATAGAGGAGAAGATGGAGGAGGATAGCTACAAAGTGAAAATTGAGGGGTTGGAAGTACATT GTAGTAATTGAGTTTGTCAGTTTCTACTTGAATGATGAATGATGTGAAATGTTAAAATGTTTGATCATCACAGGAAGATA AATGCTGCTGCTATTTTTCGCATTGCATATTTCATCACATGATCTCTACTAGTGAATGCTCTACAGTCTACATTTATTAC TTGAGATAAGACTTTTACCACATAAGGGTAGAAATGGACAATTGAGATTTTATTGAAGAAACTTCGTATTTATATCATAT ATGTGATTAGACGACAAAGTCACAAAGCACTATCCACATGTATTTATATAATAGGTTAAGCTTTTGGAAGCTTGTTTTAT ACAATTATATCAAGAGATTTT
CDS sequence (LotjaGi5g1v0104900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGACGGTGAAAACGTGCCACTCGCCGTCGTCTACTCCGACGGCGACAAAGAGACCAACGTCGGCACCGTTGCGGT GGGTCCCACCCTGGGTTTCAAGAGGCTCCTCTCCCTCCTCAGCCAGAAGGTCGGGATCTCGCCGCCTCAGTTTTCTGTCT TTCTCGCCAACAACAGCAGCGACTGGAAAATCCCCCTCACCGCCAAGTTCAACTTCGCCGCCGTGCCCCTCGACGGTGGT GACGGCGACGGCGGTTACTACTTCCTCGTCAGGCGGGCAAAGCGGTACAAGAAGTCTGCGCCGAGCTGTAAGAATCCGCC GGAGAATGTCGTTCTCCTACGCCGGGAAGCTGCCGCCGGCGACGGCGTCGGAGGAGACAACCAGACGCCGCTAACCGCGC TCAGGCCAACGTTTTCGGCGCCTCCGATTCTGGATCCCGCCGAGTACGTGAGGAAGGTGAGCAATTTGTGTAAAGAGAGG GAGTTGTTCTTGATGAGCATGGGAATCAACGGCGAGCCCGTGAGAAAGGAAGTGCCGAACAGCGGCGGCGGAGGAGGAGA AAGTGGCGGTGCGGTTTGTCGCCAGTGTCTTAAGGCCATGCGTAAAGGAATTAAAGCTAGTTTCCATTTATGCGTTAACG ATGAGGTGGTAACGGCGTTTCGGACGACGGCCGGACCAATTTCCCGGCCGGTGAAGAATTCCGGCGAGGATTGCTCCTAA
Protein sequence (LotjaGi5g1v0104900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDGENVPLAVVYSDGDKETNVGTVAVGPTLGFKRLLSLLSQKVGISPPQFSVFLANNSSDWKIPLTAKFNFAAVPLDGG DGDGGYYFLVRRAKRYKKSAPSCKNPPENVVLLRREAAAGDGVGGDNQTPLTALRPTFSAPPILDPAEYVRKVSNLCKER ELFLMSMGINGEPVRKEVPNSGGGGGESGGAVCRQCLKAMRKGIKASFHLCVNDEVVTAFRTTAGPISRPVKNSGEDCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 233 | 228 | 1.1E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0104900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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