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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0109000 |
| Transcript ID | LotjaGi5g1v0109000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | myosin-binding protein (Protein of unknown function, DUF593); TAIR: AT5G06560.1 myosin-binding protein (Protein of unknown function, DUF593); Swiss-Prot: sp|Q9FG14|MYOB7_ARATH Myosin-binding protein 7; TrEMBL-Plants: tr|A0A0B2PLW8|A0A0B2PLW8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0109000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20814634..20818978) extracted from Lotus japonicus Gifu genome v1.2.
ATCCCTCATTTTCTCTTTTTCTCTCTCTCTCTCTTTGTTTCTATCTCTTTCTTTTCTCTGAGGAGAGAGAGAGAGAGAAA GATTCATGAGCTAAAAAAATATAAACTCCAGCACGAAGAAAATTCGACACAGATAAAAAACAAATCCAAATTTCACTTTC CCGAGAAAATTTCATACAGAAGGAAAAATCTAGGGTTCCCAATCATAAATTCTCCCTTCAATTTTCCTTCCCACCAAACA CCATTCATTCATTCCCTTTCCCGCTCCTGCTCCTGTTCCTGCATTCTTTCATTCCAAGAAAATCTTGAATTCTCCGTTTT CAAGGGTTTCTGCATCGCTACCAGCTCGTGCTTCATCTTCTTTTTTTTCCTTTTTCTTTTTGATTTTTGTTTGTTCTTAA TTTTATCTGGCGCTGCTGAATTTTGCGGGAGAATTCACCTTCGTTTTCCGCTCCCTGCGACCTTCGCCGCCGGCGAATCC TTCAAGGTGTGTGTATTTTTTTTTGTGTTCCTGAATTTTCCCCTCCATTTTTGTTTTACAATTTTGAATTTTGAATTCCT CAGCTTCGAGAAAATTAGATTCCGTTGTAGGGTTGATTCAAAACTGAGGATATAGAAATCAATTGAATTTTAGTGTTGGG TGTTCCAAGTTATGCTTTCATATTTTATTTTATTTTTTCTATTTTCGTTATGTAGGTGCTATGATTTAAAAAAAAATGTA TATATATTTGGTTAATTAATTGCTTGCTGTTATCAATTTTTTTGTGATAGGTGTTTTGGCTAATTGTTTGATCTGCTGGT GAAGGTGCTTGGAGGGGCGGGGAATAGAATGGTTGATATAGTGGTTATTGGTTGGAAGAAAGCGAGGACATTATATTTTC AAATGTCGGATTTGTAAGATCTTTTGTTGCGTGATTGTTCATGTAAGGAAAGCATTGGTGATTTTAGATTGTTGAAGGGT TTGAATACATTTTTGGATCTATGGATTTGGAGGTAGTTCCTTCTTCCAGGGATTTGTTGAAATGTTGCGACTGCGGGTGT AGGTGTTCCTTCCAAACTCAATCCTCAGGGACTTGGATGCGTTCTGTTAAACGAAAGCATGATGAGTTTGAAATGGAGAG CCAATTGCATATGCCTGCGATTGCGCGGGTCGACATGGAGAACGAATGTATGGTCTTGCGCGAGATGGTCAGTGCGCAGC AAAAATCCATCCAAGATTTGAATGGTGAATTGGAGGAAGAGAGAAATTCTTCATCTACAGCTGCGAATGAGGCCATGTCG ATGATCTTGAGGTTGCAGAGGGAAAAAGCAGAGATTCAAATGGAAGCACGTCAATTCAAGCGATTTGCAGAGGAGAAGAT GACACACGATCAGGAGGAGTTCTTATCTTTGGAGGATTTGTTGTACAAGAGAGAACAGATAATCCAGTCACTTACATGTG AAGTTCAAGCTTACAAGCACAGGATGATGAGTTTTGGGTACACTGAAGATGAGGTGGAGGGTGATCAATGTGAATTTCCT CCCTATGAATACCCTCCTTTGAAATGTAACGTGATGTATAATGCCGTAGATGCTGATAATGATGACACAGATGTTGAGAA ATATGTATTTGGTGAAACTCCGACTGACCGTTTGAGGAACTTGGAAAATAGGATTTCCCAAATGGAGAGAACCCCCAATT ATAGCCAGGTGGATGGGGAATTTACAGGAAAAAATGTTCTAGATAAGGTAATTGTTGGACAGTCTCCGAGGTGGCCAAAA CATTCTAGAAAAGTTTCTTGTGATTCAACATCATTTGGTGGGATGGGGAGAGAAACAGGTCCAGAGTTTCCGACGGACTC TCCCAAGCTCGATAGAAACAGCCGTAAGGAATTTTTTTCACAATCAGAGGAGGACCATTCCAATTTGAAGAAGGCAGATA ATGGTTCAGAAGGTGATGATACGAGTGACAGAATTTATACAATTGACTCTATTCATTCTGGGGCACCATATAATGGATTT ACAGATTCCAGAGCTGGAGCTGGTGCTTTCGAAGATTGTGCAACCACTCCAATGGAATCAGGGAATCTTGCTGATTTTGA GGATCCCTACGTAAAGAAGCTTTACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCACTCATTT CAATGCGCACAGATAAAGCACAGCTTGTGTTGCTAAAGGAAATAGCCCAACATTTGTGCAAAGATATGTCACTGGAAAGA AAAGTGACTGCAAGGAAGCCATATACTGGTGGCAGGTCTTCATTCTTGTCAATTTTTAAGGTAATTTAAAGAAGAAAATG GCTAATACCAACTCAATGCATGTATTTCTGCCATATATCTAATTGGACCAATACATCTGACTTAATTTATCCATAACATT TTATCTCAAGTTTATATTTGAGATAATCTCTCATCTCGCATCATTCTCGTCACCGTTGTTTGCCTTTCAGTTAATGATTT ATTGCAAGTGGCTTTCAGCAAATCAAGTTCTTTGCTGAGTTTTTAGAGATGCCTTATGCAGTGAATGTATGAGACAAATG AGTCTCATTTAACGGTAGAAATAATTGATGTTGACTGTTACTGTTTTGTTGATTTGTTGATTATTCCAGACATTGCCTAT GTACCCCCCCCGTTCTTCCCTTTCTTCAATGCTGCTATGGAAGATTTATCTGGCAATGCATGCGGGTTTTTTACTGACTG CATTATTGGAAAATATGCATAAATTTTATGAAAGCTTTCGAAAATATCACTTATACTATTTCCTCTTTTGGTTTTCAGTG GGTCGCATCATTTGTTTTCTGGAGAAAGAAAGCACAGCAAAGCAAGTAAGTGACCACAATATTGTTTGTGACTACTTAGA ATATATTTTTGCCTGACTTGGAAAGTTCACATTGTATTTACATGAAAGCAAATTATTGAAATTCTCACCACCACTTTACC CAAAAATATTTTGAATTGCCGATGCTCGTAAGTGATTTTGACTTTAACAAGCTTCTACAATAAAATATTGAACATTGAGC CATATCTTTATCTTTGAAGATTCACCATTTACATTTGTAACTTACTGCAGCGGGCTTTGATTTTCCCAGTGTAAATTTAG CATGTACTCATGAATTCGTATTCTCTTCTACAAAATTAGGCATTTTATTCAAAAAGCAATTCCTGTGTGATGATGTCTAC TAATTATGCTTTCTGGCTTAAAACAAAATGCATGCCCTATGAAACCATCCTATAAGAAATATTAGCATAATTACAACTAT GACAATTATGCTAATGGGGGTGATTTCATAGGTGTTGTATTGTTTTAATACTTGGAAACATAGAGAAACATTTGTTACTT AAAGTCTTCAATGGCGATCCGTTACAAGAAATTATCCATCATCTAAAATGCTTGTGATCGCTGCAGGTATATGTTCGGGC TACCTGCTGACAGTGTGGGTTTGCTGCTGCTCCTGGACAAAGGAACACGCACAAGGCCATGGAGATGTATTTCTAATACA CAATTGGGAGATTAGTTCTCCAATCTCGGTGTCAAATGTGGGAGCACCTACTAAATTTTAGTAACACTACTACGATAAGA TTTTTTGGTCCTTTTCCCCTGGATCTTTCTCGCTGAAAAAGTGGTGTATTGTGCAGTGTTCTTTTATTTGTTGTATGAAA TTGAATATAATTTGTTGGTCAATTCGTGAGACCTGGATTTGACAATGACATATGAGCATTCTTACTCGTCTGTGGATTGT TGGGGTTGAGTTTGAGGTACTTCTGTGGACAACCCTGTCTTGTACATAACATATAGCTGTAAGTTTTCTCACTCTTCATG CAATGCAGCTTTTTGTGCTGAGTGATGCACATTCAGATGTACAGTGACTTCAAAACCTCAACATCCAAATCTTAAGTGCT GAAGGGATGATCTTGCATTTAATATTATTCTTTTATGTTTATCAGATACATGTAAAGTTGGCTCTCTCCTTTTTTTTTTT TTGTCTTTTAAGTGAAGGCTTGTCACGTCTTTCTGTTTTCTAACAATGTAAATTGTTCAATATTAACTAGTGTGTATATT CTATGAGGTGGGGGGACACTTATGTTGAATGCTTGCTTTCATTCCAACGCCAATCCACGTCTTAAGTAGAACAGAAAATG AAAGAAAGATTTCTCAAATTAAATAATACTTGATCACTCTAGAAATAAGATGATGATTAGAACGTGGACAAAACGAATTT GTGGCTGCTCTTCGCTTACCATTCTATTGAAGTGTTTGACCTCGAGGGTAGATGTGTTAGAAGTTTGCACACTTTGTATG AACAGCCCTCAATGTTTGACCAAAC
CDS sequence (LotjaGi5g1v0109000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGGAGGTAGTTCCTTCTTCCAGGGATTTGTTGAAATGTTGCGACTGCGGGTGTAGGTGTTCCTTCCAAACTCA ATCCTCAGGGACTTGGATGCGTTCTGTTAAACGAAAGCATGATGAGTTTGAAATGGAGAGCCAATTGCATATGCCTGCGA TTGCGCGGGTCGACATGGAGAACGAATGTATGGTCTTGCGCGAGATGGTCAGTGCGCAGCAAAAATCCATCCAAGATTTG AATGGTGAATTGGAGGAAGAGAGAAATTCTTCATCTACAGCTGCGAATGAGGCCATGTCGATGATCTTGAGGTTGCAGAG GGAAAAAGCAGAGATTCAAATGGAAGCACGTCAATTCAAGCGATTTGCAGAGGAGAAGATGACACACGATCAGGAGGAGT TCTTATCTTTGGAGGATTTGTTGTACAAGAGAGAACAGATAATCCAGTCACTTACATGTGAAGTTCAAGCTTACAAGCAC AGGATGATGAGTTTTGGGTACACTGAAGATGAGGTGGAGGGTGATCAATGTGAATTTCCTCCCTATGAATACCCTCCTTT GAAATGTAACGTGATGTATAATGCCGTAGATGCTGATAATGATGACACAGATGTTGAGAAATATGTATTTGGTGAAACTC CGACTGACCGTTTGAGGAACTTGGAAAATAGGATTTCCCAAATGGAGAGAACCCCCAATTATAGCCAGGTGGATGGGGAA TTTACAGGAAAAAATGTTCTAGATAAGGTAATTGTTGGACAGTCTCCGAGGTGGCCAAAACATTCTAGAAAAGTTTCTTG TGATTCAACATCATTTGGTGGGATGGGGAGAGAAACAGGTCCAGAGTTTCCGACGGACTCTCCCAAGCTCGATAGAAACA GCCGTAAGGAATTTTTTTCACAATCAGAGGAGGACCATTCCAATTTGAAGAAGGCAGATAATGGTTCAGAAGGTGATGAT ACGAGTGACAGAATTTATACAATTGACTCTATTCATTCTGGGGCACCATATAATGGATTTACAGATTCCAGAGCTGGAGC TGGTGCTTTCGAAGATTGTGCAACCACTCCAATGGAATCAGGGAATCTTGCTGATTTTGAGGATCCCTACGTAAAGAAGC TTTACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCACTCATTTCAATGCGCACAGATAAAGCA CAGCTTGTGTTGCTAAAGGAAATAGCCCAACATTTGTGCAAAGATATGTCACTGGAAAGAAAAGTGACTGCAAGGAAGCC ATATACTGGTGGCAGGTCTTCATTCTTGTCAATTTTTAAGTGGGTCGCATCATTTGTTTTCTGGAGAAAGAAAGCACAGC AAAGCAAGTATATGTTCGGGCTACCTGCTGACAGTGTGGGTTTGCTGCTGCTCCTGGACAAAGGAACACGCACAAGGCCA TGGAGATGTATTTCTAATACACAATTGGGAGATTAG
Protein sequence (LotjaGi5g1v0109000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLEVVPSSRDLLKCCDCGCRCSFQTQSSGTWMRSVKRKHDEFEMESQLHMPAIARVDMENECMVLREMVSAQQKSIQDL NGELEEERNSSSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKMTHDQEEFLSLEDLLYKREQIIQSLTCEVQAYKH RMMSFGYTEDEVEGDQCEFPPYEYPPLKCNVMYNAVDADNDDTDVEKYVFGETPTDRLRNLENRISQMERTPNYSQVDGE FTGKNVLDKVIVGQSPRWPKHSRKVSCDSTSFGGMGRETGPEFPTDSPKLDRNSRKEFFSQSEEDHSNLKKADNGSEGDD TSDRIYTIDSIHSGAPYNGFTDSRAGAGAFEDCATTPMESGNLADFEDPYVKKLYMRLQALEADRESMRQALISMRTDKA QLVLLKEIAQHLCKDMSLERKVTARKPYTGGRSSFLSIFKWVASFVFWRKKAQQSKYMFGLPADSVGLLLLLDKGTRTRP WRCISNTQLGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 480 | 480 | 6.9E-277 | – | |
| PANTHER | 1 | 480 | 480 | 6.9E-277 | – | |
| ProSiteProfiles | 61 | 159 | 99 | 23.072 | ||
| Pfam | 66 | 155 | 90 | 5.2E-34 | ||
| Coils | 70 | 125 | 56 | - | – | |
| MobiDBLite | 258 | 324 | 67 | - | – | |
| MobiDBLite | 284 | 324 | 41 | - | – | |
| Coils | 371 | 398 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0109000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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