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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0112900 |
| Transcript ID | LotjaGi5g1v0112900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding family protein; TAIR: AT3G58480.1 calmodulin-binding family protein; Swiss-Prot: sp|Q9M2G8|IQM6_ARATH IQ domain-containing protein IQM6; TrEMBL-Plants: tr|A0A072VIC5|A0A072VIC5_MEDTR Calmodulin-binding family protein; Found in the gene: LotjaGi5g1v0112900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:22493181..22498581) extracted from Lotus japonicus Gifu genome v1.2.
TTTACATTCATTAAGCATTGCAAAAGAGAAAAAAACAACACACCTAAGCCACCCTGTAACCTTGTGAGCCTCCGAAAAAA GAACACAACCCCATCATCATCCTCTCCCTCCCACATTGTTCGGTCTCTCTTTCATTCTTACCTTCCATTGTCTGGGTTTC CTCTTCCTATTCTCTCTCTGTCTCTCTCTACACCCCTTTGTTTGTTGTTGGCTCTCTCTATCTCCCAGAGCCTTTCTTCA TCTCCCCTGGTCCCACTGTCACAAATTAACAAGGTATGGTTATTCATGCCCTTCATAATATTGAGGGTAGCAAAAAACAT TGATATTGTGGGCCTTGTATAGATATTTCTATTTTCATGTTTTAAAAAATTCAAGTAAACTGTGAGGGGAGAATGTTTTC TGAGAATATTTCTCTGCCTAATAATTTTATTTTTTTCATGTATTCAAACATTTAAGTAAACTGTGAGAATGTTTTCTGGT TCTCAGAATTGAATTAGAAAATTTGCATTGTTGTAACATGTTTTTCTGGACTTGATGACAATTAGGCCATTATTTTTAAT TGTTTTCTTTTTGCTACATTGTTGGTGTAAAAAGGGTAAAGTGGCTTAAAAGCTGGATTCGGTGCTCCCCAGGGGACACT ATGATCATTCTCCATGTGGGTTATTGATTTATTCCAACAATGACAATGTTCCTTGATCCTTCTTTTGCATTGCTTCTGAA ATGTGCAGAATGAGATAATGTTTCAAGTAACTTCCCTAATATCCACTGCAGCAACAACAACAACCATAAACTTTTTGTTT TCATTAGATTCATGGAGTCTATAAGCTTCAAATAAGGCTGTAATATTTTATTATACAAATATTTTCAAATATTCACTAAC ATGGATATTTACAAATGTGTGTACAAGGAGTTTAAATTAATCATATCTTGTGCATTGATTGTATTGTTTCGTAACCAAGT ATTTGAAGATTTGATTACTCATTCTTATATTGTTTGGACTCTGTTGAATCATTTCCGTATCTGTTTCATTCCTCTTTCCT TAAAGGATCAAAATGCTGAGAGTTAAAACTATGAAGATCTTCGTAAACATTTTTAAGGGAAGAATTTTTTTTTAATCTAA CATAGGTATCTTCACGTTAGACAATCGTCTTCGAGCCCAGGACATCCACATTCTTGTGGGGCTAGCTCTCCCGCGGAGTT TCTTTCATACACTAGACTCGGATACGAGACCTTACTTAAGGGGAATCAAACAAGCACCATTTGAATATTGATCCTTATAT CTCCACCATATTATATAATGCAAAGCATAGCTTCCAAGCCTCATGACTTTCTCCTACTCCCTCTTCTCTATTTTGAAAAA TTTACATGTTCTACTAGGAAGATGAACGGTCTAAATTTTGTTCATCGGTATCTTGATTTATTTGAAGATATATATTCATA AGTCATAACAATTTATTAAATGGGAAAATTGCTGATTTGTATTGTACCTTTGAAGTTTATCTTGACATCTATCTACTTGG TGCATGAAGATAAATAAAGCATATTAGCATACTTTCTGTTCCCTTGGTTTGAGTGGTTTTGTGGTTGTGACTCAAAACCT GCCTTAACAGAAATCACACTGTGCAGGGAAGATGATGCTTGAAGGATCGGTCAGCATTAATGGCCGGGAGTTGGAGACAA TGCTTTCTTTCAGATCTCCCACTGCAGATGTGGATAGTGAGTTATTTGGTAAACCAGTAAGCACAATGAGTATAAACACA TATGATAAGTTGTCAAGATCATATAGTAACTTGTCCGAGAAGAGCTACTATTCACCGTTGCTGGAGCCACGACATCAAAG AGACCTAGCTGCACTCAAGTTGCAGAAAGTTTACAAAAGTTTTCGAACAAGGAGGCAGCTCGCAGATTGTGCAGTTCTAG CCGAACAGAGATGGTTAGTTCCAATATACTCACTTGGCTAAACAAACAATTGAATTTAAGTATAAATTGATTCATTTTAT TTGTTCATTTCTAGGTCAGTTGATATGGAAGTGTATATGTTCATATTTGTTTTTTGAAAACAGAATATAGAATTCGCCAC CCTTAAATACAAACTTAAATATGTATATGTTCATATTTAAGAGTCTTTACTTCGAAATATCTCATCAATTACTGTCAAAT TAAGTTTGTAATCTCTATCAAACGTTAAGGTGTTTGTAATTGTGTTCATCTTACAAGATTGCATTCATGTGTATAGGTGG AAGGCTTTGGATTTTGCAGAACTAAAGCGCAGTTCTATATCTTTTTTTGACATCGAGAAACCAGAGACTGCGGTTTCACG TTGGTCGAGGGCTAGAAAGAGAGCTGCCAAGGTAATGGTTTGAATGAGAAACGTGATGAAAAGGATATAAGGAACTGAAT TTATGTTTTTTCCGTTCTTATATGATTTGTGTTATAATATGTTCTTGAAGTAAGTTGAAAGTTTAGTCATTTTTTCCATT TGTTCCCTTATTAATAGGTTGGAAAGGGTTTATCTAAGGACAGGAAGGCTCGGAAACTTGCTTTGCAGCACTGGCTAGAG GCAGTAAGTCTCAAATCTAAAGTAACAAAATTAAAAAAAATATATATATGTTAGCTTCTCTAACTGGTTGTCAATTTGAA CAGATTGACCCTCGGCATCGTTACGGCCATAACCTTCAATTTTATTATGTCAAATGGCTCCATTGTGATAGCAATCAACC TTTCTTCTACTGGTAATACTAAAACAAGAATAAAGAATGCAGTTTGTTTTCTACAAGTAACTTACAATCAAACTAATGGA TGTTTACCTATCTACAAGTGTAGGCTTGATATTGGGGAAGGCAGGGAATTCACTTCTGAGAGATGTCCTAGATCAAAGCT TCAGCAGCAATGCATTAAGTATCTTGGTCCAGTAAGTTTTCTCGTTCCCTTTAATATCCCATTTTCTTTCATCCAGATGG ATCAAGCTCATGTAACTAACTCTCTCTAACAGTTACAAATAGATGTCTATCAGTAAAACTCTAAATTATTTAAAAAAAAG GGAGCCTATGAATTAAAACTCCTGCTATGTGCGGGGTCCTTGGAAGGGTTCAAATACATGGTTCATTGTACACAACTTTA ACTTGTTTTTTATTTTACACAAGAAGCTGTTTCCTGGACTTAAACCTGTGACCTCAGTCACATGGTAACATTTACCATTG TGTCAAGGCTCCCCTTAATTATGAGCAGGCCAAAATTTTAAAGGAAATTGAATGAAAAACCCAGAGCTATTAGATAACTT AACTGTCAAGTAAGATGTGAAGGTGTTCTTATCTTTGTTCTTTTCCAGGCAGAAAGAAAAGTTTATGAAGTAATTATTGA GAATGGGAGGCTCTTCTACAAAGAGAGTGGGACAGCTGTTGAAACCACAGGAGATTCTAAGTGGATTTTTGTACTCAGCA CATCCAAGACTTTATATGTTGGGCAGAAGAACAAGGGCACATTTCAACATTCAAGCTTCCTGGCAGGTGGTGCCACATTG TCTGCTGGTAGATTAGTGGCGCTGGACGGTGTTCTTAAGGTATGAAATGAAAATAAACCTAAGACTTTCATGATAAATCA ATACGTGCATATTTGGATTTGTGTTAGACGGGTTCTCCAAAGCATGTCCACGGAGAAGATCCATGTTGTAGCTTCTGCTT TAACTTGATTTTGAAGTCTAACATGAACTCGAAACGTCAGACCAAAAATGCACTACATTGAATTACTTTTTCTATTTTCC TGTTATTTAGTATACTGACAGTAAACCTTTTCTACTCCAAAGGCAGTTTGGCCTCACAGTGGGCATTATCTCCCAACTGA AGAAAATTTCCTCGAATTCGTGTCGTTCCTTAAGGAAAACCATGTGGACCTTACTAATGTACAGGTAAAAGATGAATTTG CCTCAGAATATAGCATCTTTCAATCTATTGCAGACTTTCATTCAATTTAACATGATAAGAGGAGAAAATTAAACTTCTAG AGTTGCATACATCCACACTCATCATTATCTCACGCTAGTTTACTTTGGAATAGAGAGTTAAAGATAGCTGTTATAACTTG ATCCATGACATAATGTGTAGTGAATTAGCCAATAGTCATGTTCATTACATCTAGAAGATAAAATATTTTCAGGATATTAA ATGTCTTTTTCTTGTATCTAGAAAAACCCGGAAGAAGAAGATGACGCAGCCAAAACAAAGCAGGATCTTCTCTCTCGAGG ATGTTCTTTAGAGGCCAACAAGTTTCCTCCAAATGATGAAACTGAGAGTTCCAGCACACTGACCGAAGAGCTAGCCAACG GGGGCTCTAATAATGCCGATGATGATTCAACCTCTGATCCACCGTTGTCAAGATTGTCACAACGACTCGGATCAAAGATA GCTAGACTTGAAATACCAAAACGAGGCAACGTGCCGGTGATTTTCGGAGAAGATCTTCTTAAAGATACCCAATTCTTTTC TCCAGTTTATGAACCTGATTGTGGTTATGAGACAGCAGAAGAATCATTTATCAATGAGGAAGAATTCATGGTTTCCAAGT CTAACTTGTTTGATGTAGATGAACATAATGAAGAAGAAAATACTATTCCAAAAGAAAAGATAATGAAGAGGATAAATTCA CACAAAGGCATGAAATCATATCAGTTGGCATATCACTTGTCTACCAAATGGACAACAGGTGCTGGTCCTAGAATTGGTTG CATGAGAGACTACCCACCTGAGCTTCAGTTCTTAATTCTGGAGCAGCAAAACTTATCTCCAAGGACAAGAACAACAGCTC CATCACCCCGGATCCCGCCATTGTCGCGCTTCAGCCCTCGTGTTGCTTTCCCAATTCCTTCAGCTGATTCTCAAACCCTT CATGTGCCTGAAGCAGCTGATCTATAGACAACAACAACAACAACAAAAGTCTTATCCCACAAAGTGAGGTCGGGTATATG GATCAAACAATGCCATTCAGCTCGATCAAAATCCCAGATTATTGAGGAATATTACTGAAGCAGCTGGTCTATGAACTAAC AAAAACAGTGCATAACATAAGGTGCCAATTAAGGGATGTTACTTCTGTTGGGGGTTCTTGGAGTTAGAGAAAACGGAATA GGATTTGTTTTTTTTTTGCAATGTGTGTTTTCATCGCATCCATTCTTTAAACCCATACAGTTTTTGTAGGTGTTGTGGTG AATGAGGGAACACAAAAGAACTTCGCATGTTCTAGTTTCAAAATGTGAAGACAGAATATGATAAAGTTCTTCCATGTCCT AGAGATTGAAACAATAGCAATTTGCAAATCATTAATGATATGTATAATTATAGTTATGTAGCAAACCCGGTGGACATTGC TGAGCATTCTTTTTTTTTTTGAAATTAGCTGAGCATTTTTA
CDS sequence (LotjaGi5g1v0112900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCTTGAAGGATCGGTCAGCATTAATGGCCGGGAGTTGGAGACAATGCTTTCTTTCAGATCTCCCACTGCAGATGT GGATAGTGAGTTATTTGGTAAACCAGTAAGCACAATGAGTATAAACACATATGATAAGTTGTCAAGATCATATAGTAACT TGTCCGAGAAGAGCTACTATTCACCGTTGCTGGAGCCACGACATCAAAGAGACCTAGCTGCACTCAAGTTGCAGAAAGTT TACAAAAGTTTTCGAACAAGGAGGCAGCTCGCAGATTGTGCAGTTCTAGCCGAACAGAGATGGTGGAAGGCTTTGGATTT TGCAGAACTAAAGCGCAGTTCTATATCTTTTTTTGACATCGAGAAACCAGAGACTGCGGTTTCACGTTGGTCGAGGGCTA GAAAGAGAGCTGCCAAGGTTGGAAAGGGTTTATCTAAGGACAGGAAGGCTCGGAAACTTGCTTTGCAGCACTGGCTAGAG GCAATTGACCCTCGGCATCGTTACGGCCATAACCTTCAATTTTATTATGTCAAATGGCTCCATTGTGATAGCAATCAACC TTTCTTCTACTGGCTTGATATTGGGGAAGGCAGGGAATTCACTTCTGAGAGATGTCCTAGATCAAAGCTTCAGCAGCAAT GCATTAAGTATCTTGGTCCAGCAGAAAGAAAAGTTTATGAAGTAATTATTGAGAATGGGAGGCTCTTCTACAAAGAGAGT GGGACAGCTGTTGAAACCACAGGAGATTCTAAGTGGATTTTTGTACTCAGCACATCCAAGACTTTATATGTTGGGCAGAA GAACAAGGGCACATTTCAACATTCAAGCTTCCTGGCAGGTGGTGCCACATTGTCTGCTGGTAGATTAGTGGCGCTGGACG GTGTTCTTAAGGCAGTTTGGCCTCACAGTGGGCATTATCTCCCAACTGAAGAAAATTTCCTCGAATTCGTGTCGTTCCTT AAGGAAAACCATGTGGACCTTACTAATGTACAGAAAAACCCGGAAGAAGAAGATGACGCAGCCAAAACAAAGCAGGATCT TCTCTCTCGAGGATGTTCTTTAGAGGCCAACAAGTTTCCTCCAAATGATGAAACTGAGAGTTCCAGCACACTGACCGAAG AGCTAGCCAACGGGGGCTCTAATAATGCCGATGATGATTCAACCTCTGATCCACCGTTGTCAAGATTGTCACAACGACTC GGATCAAAGATAGCTAGACTTGAAATACCAAAACGAGGCAACGTGCCGGTGATTTTCGGAGAAGATCTTCTTAAAGATAC CCAATTCTTTTCTCCAGTTTATGAACCTGATTGTGGTTATGAGACAGCAGAAGAATCATTTATCAATGAGGAAGAATTCA TGGTTTCCAAGTCTAACTTGTTTGATGTAGATGAACATAATGAAGAAGAAAATACTATTCCAAAAGAAAAGATAATGAAG AGGATAAATTCACACAAAGGCATGAAATCATATCAGTTGGCATATCACTTGTCTACCAAATGGACAACAGGTGCTGGTCC TAGAATTGGTTGCATGAGAGACTACCCACCTGAGCTTCAGTTCTTAATTCTGGAGCAGCAAAACTTATCTCCAAGGACAA GAACAACAGCTCCATCACCCCGGATCCCGCCATTGTCGCGCTTCAGCCCTCGTGTTGCTTTCCCAATTCCTTCAGCTGAT TCTCAAACCCTTCATGTGCCTGAAGCAGCTGATCTATAG
Protein sequence (LotjaGi5g1v0112900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLEGSVSINGRELETMLSFRSPTADVDSELFGKPVSTMSINTYDKLSRSYSNLSEKSYYSPLLEPRHQRDLAALKLQKV YKSFRTRRQLADCAVLAEQRWWKALDFAELKRSSISFFDIEKPETAVSRWSRARKRAAKVGKGLSKDRKARKLALQHWLE AIDPRHRYGHNLQFYYVKWLHCDSNQPFFYWLDIGEGREFTSERCPRSKLQQQCIKYLGPAERKVYEVIIENGRLFYKES GTAVETTGDSKWIFVLSTSKTLYVGQKNKGTFQHSSFLAGGATLSAGRLVALDGVLKAVWPHSGHYLPTEENFLEFVSFL KENHVDLTNVQKNPEEEDDAAKTKQDLLSRGCSLEANKFPPNDETESSSTLTEELANGGSNNADDDSTSDPPLSRLSQRL GSKIARLEIPKRGNVPVIFGEDLLKDTQFFSPVYEPDCGYETAEESFINEEEFMVSKSNLFDVDEHNEEENTIPKEKIMK RINSHKGMKSYQLAYHLSTKWTTGAGPRIGCMRDYPPELQFLILEQQNLSPRTRTTAPSPRIPPLSRFSPRVAFPIPSAD SQTLHVPEAADL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 548 | 548 | 1.2E-257 | – | |
| PANTHER | 1 | 548 | 548 | 1.2E-257 | – | |
| MobiDBLite | 352 | 395 | 44 | - | – | |
| MobiDBLite | 360 | 395 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0112900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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