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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0117800 |
| Transcript ID | LotjaGi5g1v0117800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH:ubiquinone oxidoreductase subunit; TAIR: AT5G52840.1 NADH-ubiquinone oxidoreductase-like protein; Swiss-Prot: sp|Q9FLX7|NDUA5_ARATH Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial; TrEMBL-Plants: tr|A0A151T4D8|A0A151T4D8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0117800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:24304787..24308180) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGGCCCAGGCAACAGAAGCCCAATGAGTCCCATTGCTAGTTACCCACAAAAACAAAAAACTGAAATGTCTATATCGA TCTTCGATCACTCTGAGAGCATCGCATTTCATTTCACTGAGAGAGAGTGTGTTTGTGGGTCGATCGAAGATGTTTCTGCG TGCGGTGGCGCGGCCATTGATGGCGAAGATGAAGGAGACGACGGGGATAGTGGGGCTGGACGTGGTGCCGAACGCGAGGG AGGTGCTGATTGGGCTGTACAACAAGACGCTGACCGAGATCCAGAAGGTTCCGGAGGACGAAGGGTACCGGAAGGCGGTG GAGAGTTTCACGAGGCACAGGCTGAAGGCGTGCCAGGAGGAAGAGGACTGGGAGGCAATCGAGAATCGTCTTGGGTGTGG CCAGGTCGAGGAGCTCATCGAGGAGGCTCAAGATGAGCTCAAACTCATTTCCCACATGATCGGTAATTTCAATCATTCTG AGAAAATTGGGGATTTTTATTTTTTTTATATTTCTCCTTTTTTACTTTTCTACTTTGTTGTCTGTGTTTTTGTTGTTTGT TATTTGAAGGGTTTCAGGAATTCAGAGAGTGAAAGTAGAAGAAAAGGGATGTGATTGTTTTGTAGGGTGTTGTGAATTTG CATGTTTGTTACTTGTTTGTGTGTCTTTTTTTTGCTTTTTTAGAGTATCTAGGGGTTTTGGAAGTTGGCAAATTTACATG GGGGAAAATTGGGGGTACTTGAATGATAGGCTACAATGCAAAGCATCATAAAATCACAATGATGGAAATAGGATCAAAAT TAGCTTATGAACATGTTAGCATGTGAGTTGGAAGCCTTCACTTCTGAAATCCTTTTGATTTAGGATTTAAGCATGTAATT TTCCCCCTGTCTTTCTACTTTAAAATTTCATCATTGTTCGAGTTTCTAGTCAGACTCCTTTCAGGCCTTATGTGGTGTTA TTCTAGTAAAAATTGAAAAGGTTTTGTATGGTTGGAAAATTCCAAAGTCTAGAAATTTAACAATTTGTTTCTCATTAAAT TGTAGCATAAGTTAAGTTAGTTCCAGCCTTCCTTTGTATAACAACTAAAGGTATGTGTGATGAGTCTTTATGTTGGTATT AATCAAAGCGGATCCAATATTCTGCCACGATAGTGTAGTTCTCTTAGAGCTAGAGCAGTTTAAGTGGAATAGCTATTTAT TTATTTACTACACCCTGTATTGTCAAGATCAGAAGTTGAACCACAATATTGCTTGATTCAATGACCATATTTAAGTTGAA CAGGCCTGATCCCAGTGCAGAACTCATTCTATTGGGGTCATAAGATTGTGAAATCAATGGAATTGTACGCACTGTAGAGA AACCCTCATTGATTGCGAGATTTCTCCTTCCAAATGTTTCTGTGGGGTTCATTTTAGAATTACTGGTAAATCTATCTGTG AGGTTTCTGATTCTAGACTTTCTGGAGCATATTTGTAGTCCATTCTAGAGTTACTCCTTGGGGAGACTAGCAAATTCATG AATAGTTCTTAACTGCATAATACCGACGGAGTAAAGTTGTATTATAAGGTTTAAGTATTAGTGTGTTTTTCAAGTATAAA TGTCTTATCTGTCATGTGATGGTAACTGAAAGATTGATGGGAAAGAGGTCCTTATATCATTGCTGAATTGGTGAGGCAGT TGCAAGTGGGGAAGGAAACTCATTTACCTTCTGGCAGATGATTTTCTTAGAATTTGCATTGAGTTTCATTACTGCTTAAC AAATAAATACTTAGTTACTTTTTGCGAAGATTTTCTACAACACATGGGTAAACTTAAAAATGAAGAAATCATTCCATTGC AGACTCCTGATTGCTGTTTCTTTTGCATATTTTGAAGCAGTTTTAGATGTTGGTTCCAATTGATTACGTGGTTCACAGAG CATTGACTCATATATGTTGGTGGTCCGAAATCTAGTTCAGTTTAGATGTTACACTTCATTAGACATTTTCAAATTTTAGA AGCTCCAAACTTAAAATTTCCTGAAGCTCAAATGTCCTGAGTTTTTTATGTTGAAATGCCAACTTCGGTAAGGCTATGTT TTGAAGGATGGCTGAGGAGGTACTGGGAAGGAATAGAATGGGTAAACTTAAAAGGAAGAATCAGAATGGTAATGGAAGGA CTCCTTGCCACTCAAAGCATCCAGGTTTTATCCCCCGAAATTAATGGGCTAATGAGGGAATGACACACGTTCCCGTTGCC CTTTCAATCCATTCATTATGAGCCACTACCTGCATGTGGTTGTTAGGATAGGTAACTTCTGTCTTTGTAAATGGTAGTTT AGATCTTGGAATCACCACTTAAATTTGGAGCAGATGGTGTCTAACATCTGTGGTTGTTTGTCTACATGCATATGCTTGAA TGTGGATTTTTCTTCAGCTATGGTAATGGTATTTTGAAATTTTGGATTACAGTGTTGGCTTTTTTCACTTTATGATTTTG GTTGCTATTGGTTTCATATTTGTTATTGGAGCAGCTTACTGCAATACTGCTCAAGCCTGTTTTTGTTATTTCATGACAAT AATTTGTGACTTTGATTTTTCTTCATACTTTGGTGTTAATATAAAATTTTGTTATCATCTCCAATTTATATTAATGTTTA TGAAAGGCTGTTATATGCATCTCTTATAATGTTTTTGCATATTCTGATTACAAACAATTATGCATTGTACTTATATATAG ATATCTATTTGTTGCAGAATGGGATCCATGGGGTGTACCAGACGATTATGAATGTGAAGTGATTGAAAATGATGCACCAG TTCCCAAGCATGTCCCTCTCCACCGACCTCATCCTCTCCCTAAAGAATTCCATGATACACTTGAGGCACTAATATCCAAA TCAGGAAAAGATACCCCTGCTGTCAGCTCCAGTGATTCTCCCTCAAAGGCATGATCTTCAGCCACATTAGAGCTTTGTTG TTTCTCAATTTGAATGTATTTTTCCTTTCTCCACAGTAAGTTGTTTGTGTTTAGTAGTTTCAGACTCAAAAATCTTTCTG GGAGTAAAACCTTGGCTTCTAAATAACTTGAACTGTATGAAATAACAAGAATTTTTTGTTTCACTTTATACTATGCATGA AATGACTTGGTTGATAGATCAATAACAAGAGTTTTTAGTGTATTTATCTAGTTGGGTTAACATGACTCCCAAATTAACTA TCTTTCCAATAGTGTGTTAAAATTGCATTGTTAGATCATAACCCTAAGTAGAGCTATCAATACGGGTCAGCCCATCACGG GTTGGGTTGAAAACGGGTTAGGTTATGTCAAACCTGGGTCTTGACGAGTCAGGAAATTATGAACTCAACCCGGCTCGCTA CGAGCTCGCGAGTTGGCCAGCTAGTGAAATAAAT
CDS sequence (LotjaGi5g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCTGCGTGCGGTGGCGCGGCCATTGATGGCGAAGATGAAGGAGACGACGGGGATAGTGGGGCTGGACGTGGTGCC GAACGCGAGGGAGGTGCTGATTGGGCTGTACAACAAGACGCTGACCGAGATCCAGAAGGTTCCGGAGGACGAAGGGTACC GGAAGGCGGTGGAGAGTTTCACGAGGCACAGGCTGAAGGCGTGCCAGGAGGAAGAGGACTGGGAGGCAATCGAGAATCGT CTTGGGTGTGGCCAGGTCGAGGAGCTCATCGAGGAGGCTCAAGATGAGCTCAAACTCATTTCCCACATGATCGAATGGGA TCCATGGGGTGTACCAGACGATTATGAATGTGAAGTGATTGAAAATGATGCACCAGTTCCCAAGCATGTCCCTCTCCACC GACCTCATCCTCTCCCTAAAGAATTCCATGATACACTTGAGGCACTAATATCCAAATCAGGAAAAGATACCCCTGCTGTC AGCTCCAGTGATTCTCCCTCAAAGGCATGA
Protein sequence (LotjaGi5g1v0117800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLRAVARPLMAKMKETTGIVGLDVVPNAREVLIGLYNKTLTEIQKVPEDEGYRKAVESFTRHRLKACQEEEDWEAIENR LGCGQVEELIEEAQDELKLISHMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPHPLPKEFHDTLEALISKSGKDTPAV SSSDSPSKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 134 | 134 | 3.8E-56 | ||
| Pfam | 22 | 88 | 67 | 3.0E-27 | ||
| MobiDBLite | 150 | 169 | 20 | - | – | |
| MobiDBLite | 155 | 169 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Respiratory electron transport chain | A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of LotjaGi5g1v0117800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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