Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0120700 |
| Transcript ID | LotjaGi5g1v0120700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLP-like protein; TAIR: AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q941R6|MLP31_ARATH MLP-like protein 31; TrEMBL-Plants: tr|I3SQK0|I3SQK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0120700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:25188685..25192591) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTAAATATGTTGATTGTATTATTTCATTATTTGTATGTACAAATGGCATAATTCTCTATGTGTTTGAAGTTTTTTAA TGCGCATTAGACACAGTCCACATGCATGATTGATGGCATTATCATTTCTCTCTCTCTTCATTTTTCCGTCTCTACCCTTT TTGGTGTAATCCAACATTTTTCTTTTCTATATAAGGCAGCATACCCTTCCTCATCTCTCATCCCTTGTTAGTCCCATTAT TCCTTCCGTCTAGATATTACTTAATTGCTTTAATTTCTTTCTTCATCAGTAGTCATGGTACTTGCTGGTAAGCTTAGTAC TGAAATTGGGATCAAAGCCCCTGCTGCCAAGTTCTACGACCTCTTCGCAAAGCAGCTTCACGATGTTCAAAACCACTGCG AGAGAGTGCATCACACCAAACTTCATGAGGGCGAGGACTGGCATGAAGTTGGTTCCGCGCTTAAACACTGGACTTATGTT ATAGGTAATTCTATATGTTTTCTAACTCAATCTAGCTATATGAAAATATGTGTTAGTCTAGTGGTAAGCAAGTTATACTT TTATAAAAGAATGAATACAAGTTCAAATTATCAGATAAACATTTGTTGAAAAAGGCATGCACTGTTCCAGATTAGGTGAT CCTATCACTCAAAGAAAAAAAAACTATTATTTTAACTATGATCATAACTCTCAACTTATTTTCTCTTTCTTGATGGGTAA ACTACGAATCTAAGGTTAATTATTTAGACATATATATGACTATGTTAAAAACTTGTTCACTCATGAATCATGTCTTTATA ACAAACAATTAATACATATTATTTTGAATATATTTCTTATCTGCTAAAATTAATTTACAAAAGCTGTTGTAAATCATGTT TGTCTTGGTTCATTTACAAAACCTAAATATTTTTTATGATCACATTGATTCTTTAAAAGTTGGAGCTAATTGCTTTGTGG TCTTCCACGGATTTTGCTTATAGTTCATATGTCTAAAGATTTCGATGTTATTGACTTGTTGCTGATCATTTGGCTAGCCA AGGATACTCAAGAAAACATGAACTGTAGGCTGTTTTTTACTGACCAGAATTAAGCCTACTTGAGTAGCTAAGATGTTCTC AAGACTTCCATTCCTACTTGTTCTTCAGAATCGGTTTAAAGAAAATACATGTAACTTCTAGCTAGCTAGGGTTTATAAAA TTTATATATTGAAGTTTTATTTTATAAGTAATAAGAATTATATTGAATAGAAATACAAGGGGTACTTCAACCCAATACAA AGAGAAAGAAGAAGAGGAAATATACAAACTAAGAATTAACATGTGCCAAAACAAAGATCCTACATATGACGAAACTACCC CACCTAATACCTCCTTGAAAATAGATTTAACAAAATTACAAGCCTCGTTAAAACCTTACTAGGATAAAACTCCCTTGGAA AAACCTAGTAAGGAAAAAAAGGATAAATTATAATTTCTATTACATATATTAAAGTTCTTAACAAGATAAACTATAAATCC TGGATAAATTATAATTTCTATTACATATAAATATCACCTAAACTTGTTTATGAGGTTAGTGGTATGCAATATACCCCTTC ATGTCCCCAAAGACACCTTAAGTGGTAAAAGCTGGGATGGGAACATATAAATTTGGGAGGGAAAAATCCAATGATTAATA TTTAAAGGAGAAATTTGACTTAAAATTATATTTGGTGATTCATATACGAATCCTCCATTTTATTTCTATTTTTATAATAT TAATTTATTGAGAAGTTTGAAATTGATTAGAGATATGATTAAAATAGTGCTTATAAATGATAAAATAATTATCAATTCTA AACTAGTTTTTGGGACATATTAGGTGTAACCCGAATTCTATAAGATTATTAGAATCTCTCCTGTTTCTTTTCTTTCTCTT TTTCCCAGCTAGTAGTCTTTCTTCTGTATCTACTTGGCTGGCCAGTTGTAATCTCTTATAGTTTTCAGATATATAATATT TTGCTTATCCATAAAAAATGAGCCATCCACAAAACGCTCACTCATAAATCAGTTATTTAATTAGGTAGAGTGAGTCATAA TCCGAATTCAAACAACATTAATTTATTTATCTTTAATTTTGATCTTAATTGTGAAATTAACAACAGATGGCGAGGTACAC ACATGTCAGGAGCGCATTGAATCCGTTGATGAAGAGAACAAAACAATCAAATACAGCCTCTTCGATGGAGATATCGGTCA GCACTACAAGACCTTTCTGCTAACCCTTCAAGTGATTGAGAACAAAGATGGCCATGATACTGTTAAATGGACTGTTGAAT ATGAGATGCACCATGAGGAGAAAGAACCACCACATGGTTGGATGGAGTACGTGCATAAATGCACTAGAGATATTGATGCC AATCTTCTCAAGGCATAGCTCAAGAAGTTATGAAGAAGAAAACAAATGGGCTTGGTTTGATGATAAGTGCTTATGGTGTG AAGTTTGGTCACCTACTTGTTTGCTTCTGTTGATCGTTTGTATGGAATAAAGATAAAGATGCATTTATATATTCGGTGAT GTATGAAGAATATGTAATTAAATTATGTATGTTTAGAAGTTCATCTAATGCAATAAATAAATGGATGTTTGTGTGCTTTA TTGTTTCGGAATTGTTTTAAGCTGATCTAAGCCAAATGTTCATTCAGAAGAGGGACTTAAGCAAAATTAAAAGAAGTTTA ACAAAAGTAATATATATCAAGTTGCCACTAATTTAATTTGCACTGGGGATGGGTGTGCTCCCCATTAGTTAAATTTGCTT GGAAAAAAAGTTGCAATTTTTATACCAATAGAATATTGAGAAATAGTACTAACAACATCATGTTTTTAGAACAAAGTAAT TGACCTTACTGTTAATAAGTTTTGATAATGCCGATGTTTTTTTATTTTGAAATGATAATACCAATGTTAGTTTTAGACAT TAAGGTACTCCCTCCGTTCCAAAATATAAGTTGTTTTAGGTTGTGTACATTGTACTGTTTAAGAGTTAATTAATTGATAA ATATTTTGTTAGAAATGCTCCTATTTAAAGTTGTTTATATCAAGGAAAAAGAAATGTTATTATTGGTTAAGTGAATAGTG AGAGTTGTGATAGGTGAAAATTGAAAGTGATAATTAAGATATATAATATTAAATAAGGATATATAAGGAAGAAAGAGAAA AAAAATGCATTAGTTTTGCAAAACAACTTATATTTTGAAATATAGTACAAATTTTAAAATAACTTACATTTTGAAACGGA GGGAGTAATGTTTAGTGCTACGTGTTAGTGTTACCACGGGATCTTTTGACTAATTGCAAGAATAGTTTATTAAAAATGAA ATGTATTAAAAATGAGGTGTTAATATATTATTATTATTGTGGTGAAAAGATAATGAATGCAAGTGGAATTCTGACGTTGG AATGTGGCGAACTAAATTATTGGATTATATTTTATTCATATAAATTTGATTGATTGGGATTTGCATGGTTTTACACTTTT CAGAGAGAATATAGTGAAAATATACGCTGGGTTAGGATCGACAAGGGAGCACAAGGTGTCCCAAAAAAAAAGAATAATGT TATTTAATATCTCATTTTTACTGTTGGTAAATGAGAAGATGACAGAAATATTAGTAATATAATATATAATGAGATAAAAA ATATAGAAAAATAACATAAAGAAAAATATGTGAAAATGAAATGAGAGAGAAGTAATTACTCAAAGAAAAAAGCAAGCAGA AGAAGACTTAAAATGCAAAGCCATATATGCTAGCTAAAAAGTTATAACAATTCACACTTCATGTTCTTTTCCGAGTATCT TTTTCAGCATTTCCAGCTACATCATTACATATCATAACGTACACATATTTCTCTCATTTCTCTCCTC
CDS sequence (LotjaGi5g1v0120700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTACTTGCTGGTAAGCTTAGTACTGAAATTGGGATCAAAGCCCCTGCTGCCAAGTTCTACGACCTCTTCGCAAAGCA GCTTCACGATGTTCAAAACCACTGCGAGAGAGTGCATCACACCAAACTTCATGAGGGCGAGGACTGGCATGAAGTTGGTT CCGCGCTTAAACACTGGACTTATGTTATAGATGGCGAGGTACACACATGTCAGGAGCGCATTGAATCCGTTGATGAAGAG AACAAAACAATCAAATACAGCCTCTTCGATGGAGATATCGGTCAGCACTACAAGACCTTTCTGCTAACCCTTCAAGTGAT TGAGAACAAAGATGGCCATGATACTGTTAAATGGACTGTTGAATATGAGATGCACCATGAGGAGAAAGAACCACCACATG GTTGGATGGAGTACGTGCATAAATGCACTAGAGATATTGATGCCAATCTTCTCAAGGCATAG
Protein sequence (LotjaGi5g1v0120700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLAGKLSTEIGIKAPAAKFYDLFAKQLHDVQNHCERVHHTKLHEGEDWHEVGSALKHWTYVIDGEVHTCQERIESVDEE NKTIKYSLFDGDIGQHYKTFLLTLQVIENKDGHDTVKWTVEYEMHHEEKEPPHGWMEYVHKCTRDIDANLLKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 153 | 153 | 4.9E-72 | – | |
| SUPERFAMILY | 1 | 152 | 152 | 6.75E-36 | – | |
| PANTHER | 1 | 153 | 153 | 4.9E-72 | – | |
| Gene3D | 1 | 153 | 153 | 7.5E-41 | ||
| SMART | 2 | 153 | 152 | 1.8E-37 | ||
| Pfam | 3 | 152 | 150 | 8.4E-45 | ||
| CDD | 5 | 132 | 128 | 3.70447E-27 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
Expression pattern of LotjaGi5g1v0120700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…