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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0158100 |
| Transcript ID | LotjaGi5g1v0158100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF810 family protein; TAIR: AT2G33420.1 hypothetical protein (DUF810); Swiss-Prot: sp|O00408|PDE2A_HUMAN cGMP-dependent 3',5'-cyclic phosphodiesterase; TrEMBL-Plants: tr|I1NI08|I1NI08_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0158100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40752070..40757359) extracted from Lotus japonicus Gifu genome v1.2.
CGTGATAAATTTGTGATGTAATAAGAAATACAGAAAAATAGAAAGAAAAATAGCAGGAATTAAGATGAAAAAAATGTAAG ATGTGTAAGTATTATTACACCATCTCTTTATTTCTCGGTTAGATGAGGTGGAGAGAGTAATGCCACCAGCTAGAGCTGCA TCAAAGTGACTCTGCCTCTTCAAACTGAAAAACAGAGCAAGTCGACAACAAGATGCGACAAACACCAAATGAAAACAACA CATGAAACCAACAAACAAAATTGATCAAATTCTAGCTTCCGAGAAACCAGCAGCAAAAGCAACACAAATAGCATTCTGAT TTGGCAACACCACCACCATCCCTTGGTTTTCTTCGCCAATGACAACGTTGGCATGCTCATCCATCACCCATCGCATGAAC ATGCTGTCACCTTAACAAAACAAACAAAAAAACCGCCACCACCTCACCATGCAACAACGCAACATCCTCCTTCCTTTTAA GACCAATATAATGCACTTGTTTCTCCTTCACTCTTTCCCCGGCCCCGAGACATTTTTTAACAATAACCAACGCCACCACC AGTCCCGCCACCGTTGCCGCCACCTTCCGCCAGACCCACCACCGCATGGGTCATCACAGCCGCCGCGAGTCCTACCCTGG CACGTCATCGTCCCGCGTTGACTACTATCTCCACACCGGCTCGCGCCGTCTCGATGCGGTGCCCGCCGGTGAGGATCTCC CGTGGCCGTTCCAGAAGCTGGACGGCCTCGGCGCTGACGAGGTCAGGGAGACCGCGTATGAGATATTCTTCACCTCGTGC CGGTCTGCGCCGGGGTTCGGCGGCCGTAACGCGCTCACGTTTTACTCCAACCACGACGGCAATGGCGGCGGCAGCGATGG GGGGAAGCCGAACCAGGTGGTGACGAAACCGACCAGCAGGGTCAAGAAGGCGTTGGGGTTGAAGATGATCAAGAGGTCGC CGTCGCGGAGGATGGCCAGCGCCAGCGTGGTTTCCACGCCGTCGTCTCCGGTGGCCGGAGCTGCCAGCCCAATATCGCAC ACCGTGCCTCTGCCTTTCCGGCCCCGCCGTCCCATGACCGCCGCGGAGATCATGAGACAGCAGATGAGGGTCACGGAGCA CGACGATAACCGGCTGCGCAAGACCCTCATGAGAACCCTTGTTGGCCAAGTATGTTCATATTACATTTTTTTTTATGTTC TTAATCTTTATCATTAAGATGACACACATTTCATCCGACATTCTTCGGTCGCGACTTATTAGCATGTGGCATGCTGCTAA GTCGTATGTCCGAAGGTTGTCAAAAACCAATTATTCTAATAGCTTAAGCTGGAGGGTAAGGGCTAAGGGCTAAATGAATG GTTTTATATTATATTCTATCAATGTGGATCACTGGTATGAATATTTGTAACTTGTTGGTGGATTTTCCAGATGGGAAGGC GAGCAGACACTATAATTCTACCATTGGAACTGCTGCGCCATCTAAAGCCTTCAGAATTCAGTGATTCCCAAGAGTACCAC AATTGGCAGAAGAGACAGCTCAAGATTCTTGAAGCAGGGCTTCTCCTGAACCCATCAATCCCTTTAGATAAGAGCAACAC ATTCGCCACGCGCCTCAGGGACATTATAACCAGTTCTGAGTCCAAACCAATTGACATTGGCAAAAACTCAGACACCATGA GGACACTTTGCAATTCTGTGGTTTCCTTGTCATGGAGAAGCCACAATGGCACTCCCACTGATGTATGCCACTGGGCTGAT GGATTCCCTTTCAACATTCACCTCTACACTTCCCTTCTTCAGTCGATATTTGACATCAGGGATGACACATTAGTCCTTGG TGAAGTTGATGAGCTTCTTGAACTGATGAAGAAAACATGGACAACATTGGGGATCACATTGCCAATTCACAATGTGTGCT TCACCTGGGTGCTGTTTCAGCAGTACATAGCAACTGGGCAGATAGAGCCTGACCTTCTTTGTGCCTCACATGCCATGTTG GGTGAGGTAGCAAATGATGCTAAGAGAGAAAAGGAGTCTTTGTATGTTAAGATTCTGTCATCAGTGCTGACCTCAATGCA GAGTTGGGCTGAGAGGAGGTTGCTTAGTTACCATGACTATTTCCTCAGAGGGAATGTTGGCCAAATTGAAAGCCTTCTTC CTTTGGTGTTGTTAGCCTCAAGAATTTCTGGTGAAGATCTTTCAATCACAGATGGTGAAAAGGGAGAGAAAGGAGACATA ACTATAGTGGATTCATCCGGTGACCGGGTTGATAATTACATTCGTTCTTCCCTCAAAAATGCATTTGACAAGGTTTGTAT ATACTGCATCTTTAGCTTGTGTGTTTGGATCAGCTAATTTTTCCTCAAAATCAATTTTGATGCTCAGAAGTTTCAGCTTC TCTCCATAATTGATTTTGAATGTAAAATCAATTGTAGAAAGATTTCCATACGTGTACTAAATTATTCAAATCTTGTAATC ATAATGCATTTCTTTTATGAATGAAGGTATTAGAGGCAGTGAACTCCAAGTCTGCTGCGTTTGAAAGAAACAAAGAGTTG AGTGAAGTCCTGCTTCAATTAGCTCAGGAAACTGAAGTTTTGGTGATGAAGGAAAGGCATCATTTTAGTCCAATTCTGAA GAAATGGCACTCAACTGCAGGTGCAGTTGCAGCCATAACGCTTCACAATTGCTATGGGCAAGTGCTGAGGCAGTACATAG GTGAAGTGACCTCACTCACAACAGAATCAGTTCAGGTATTGCAGAGAGCTGGGAAGCTAGAAAAGCTGATTGTCCAAATT GTGGTTGAAGACTCCACCGAGTGTGAGGATGGTGGCAAAAATGTTGTGAGAGAGATGGCTCCATTTGATGTTGATTCTGT CATATTGAGTCTTCTGGGAAAATGGATTGATGAATCATTGAACAAAGGCAAAGAGTGTCTGCAAAGGGCAAAAGAGACTG AAGTAAGTTTTCTGCTTCATAATCCAAGGTTGTCTAACTTAGAACCTTATTAGATGCAGACCAAAGAACACTTATTGGAG CGTATCTAGTGTTTTTTTTAGTATTTGGGCCGTATCCAAACAGGTTCATACTCTATGTATTAAATGCACTATCTTGGGTG GATCAACCTAATCAAGATAGCTGTATTGGGAATTAGACCCACTTCTTCATTGAAAAATTCATTAGTCGATTTAAGATTGG GTTATTAAACCCCACGGGATAAGTTAGACATTATGATTCATGTACCTTCATAATGGAAGGACATAAGAATGCTGTTTAAA AAATTTCCTATAACTGATTTTTGTTTTTAATCATAGCATGTGGTTTTTATTTATAATTTGCTTGATTGCAGACATGGAAT CCAAAGTCCAAAACAGAGCCATATGCACAATCAGCTGCGGAGCTGATGAAATTGGCCACTACAACTGCAGAAGAATTCTT CCAAGTTCCAATAGCAATTACAGAAGATTTAGTTCAAGATCTTGCTGATGGATTGGAAAACCTCTTCCTGGACTACATGA AGTTTGTTGCAGCATGTGGTAAGAACTAAGATTCATATAGAAATAGGAAAAGACAGAACTTGTCACAACATACAAGTAAA TTGTGTATGGTTTTGTGTTAACAGTAACTGTAAAATCCAATGAGACATCTTTGAGGGCTCGTACACACGGTCCTCAGGCA CATGCGTGACACTAGATATAAAAAAGTTTTCACTTGGATTTATAAATTATACCTAATTCATTTGTAAGCATTCTCTGGAG AATTAACAAGAAAACTCTATCTCCTATGGACATAGGCACACTTGTCGAACCACGTTAATTCTGTGTGTTGCTTTTCTTAT CCTTTGGTCACTTGTGATCATTTATTTAAGGTCCTTTCGTTCCCAACTCTGGCATATTCATAACATTTTTGTTTTGACAT TTATCTACTCTCTTTTCAGGTTCAAGACAGAGTTACATTCCCATGCTTCCCCCACTAACCAGATGCAACCGTGACTCAAA GTTCACCAAGCTGTGGAAGAAAGCTGCTCCATGTGGCGCTAATTTTCAAGACCTGCATCACATGAAGGGGGCATTTGAAG GCCACCATCCTTGGTCCTCAACTAGCCGCGGAACGCAACGCCTCTACGTTCGTCTCAACACCTTGCACTACCTCCTCACT CACATCCACTCCCTTGAAAAATCGATCTCCATGAACCCGGGCATTGTCCCTTCAAACCGCCTCCGCTTCGCAAACAACCG CAGGGCTCAAAGCAATTCCTACTTCGAAAGTGTCAACCTCTCCATTCTAGCAGCATGCCAACATGTCTCAGAAGTTGCAG CATACCGTCTCATATTCCTTGACTCAAGCTTTGTCTTCTACGACAGCCTCTATGTCGGTCGTGTTCAAAGGGGTCAGATT AAGCCTGCACTGAAAGTCCTCAAGCAGAATCTCTCACTGATGACCACAATTCTAACAGATAGAGCTCAACCATTGGCAAT GAAGGAAGTCATGAAGGCCTCTTTTGATGCACTCCTCATGGTCTTGCTTGCCGGTGGACATTCCCGCATGTTCCACCGGT CGGATCACGAGATAATCTATGAAGATTTTGAGCACCTGAAGCGGGTTTTCAGCAACTGTGTGGATGGGTTGATTGCAGAT AATGTGGTGGATGGTGAGGCTGCAGTGGTGGAGGGAGTTATTGCATTAATGGGGCAAAACACTGAGCAGTTGATGGAGGA TTTCAGCATTGTCACATGTGAATCAAGTGGGATTGGCATCATGGGTAATGGACAGAAATTGCCAATGCCTCCTACTACAG GGAAGTGGAATAGAGCAGACCCTAACACAATATTGAGGGTGCTTTGCTATAGAAATGACAGAGCTGCCGATCAGTTCTTA AAGAGAACATTCCAATTAGCAAAGAGGAGATGAATATAACTGAGAAGGATGGTATTGCGTGTCTTGGTAAAGTTGAAGTC AGGAGATCCAAATTGGCAAATGCATTTCTGCTATATATAATTCCTGTCTTCTAAGTTCTAACATGGATGAACTTGTGTAA ATGTGGGGAGGGAAGGGGTTGTAATTTTTTCATGTTTTGGATATTGGAGGTGCAAGCACATGGGTAGGGAAGGGGGAGGG TGATATTTGACTTGTATTTCAAAGCACATTAGTTTTGGAATTGAGCCTTAAAAAGGCAATAAGAAATGTTTTGTTTTCAT CATTGGGCATTTTATATTGTAGGCTGCAAAATACATGGTCATTTGATCCAATAATGATACTTAGACATCCAAATAGTTAG ACACTCCACA
CDS sequence (LotjaGi5g1v0158100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCATCACAGCCGCCGCGAGTCCTACCCTGGCACGTCATCGTCCCGCGTTGACTACTATCTCCACACCGGCTCGCG CCGTCTCGATGCGGTGCCCGCCGGTGAGGATCTCCCGTGGCCGTTCCAGAAGCTGGACGGCCTCGGCGCTGACGAGGTCA GGGAGACCGCGTATGAGATATTCTTCACCTCGTGCCGGTCTGCGCCGGGGTTCGGCGGCCGTAACGCGCTCACGTTTTAC TCCAACCACGACGGCAATGGCGGCGGCAGCGATGGGGGGAAGCCGAACCAGGTGGTGACGAAACCGACCAGCAGGGTCAA GAAGGCGTTGGGGTTGAAGATGATCAAGAGGTCGCCGTCGCGGAGGATGGCCAGCGCCAGCGTGGTTTCCACGCCGTCGT CTCCGGTGGCCGGAGCTGCCAGCCCAATATCGCACACCGTGCCTCTGCCTTTCCGGCCCCGCCGTCCCATGACCGCCGCG GAGATCATGAGACAGCAGATGAGGGTCACGGAGCACGACGATAACCGGCTGCGCAAGACCCTCATGAGAACCCTTGTTGG CCAAATGGGAAGGCGAGCAGACACTATAATTCTACCATTGGAACTGCTGCGCCATCTAAAGCCTTCAGAATTCAGTGATT CCCAAGAGTACCACAATTGGCAGAAGAGACAGCTCAAGATTCTTGAAGCAGGGCTTCTCCTGAACCCATCAATCCCTTTA GATAAGAGCAACACATTCGCCACGCGCCTCAGGGACATTATAACCAGTTCTGAGTCCAAACCAATTGACATTGGCAAAAA CTCAGACACCATGAGGACACTTTGCAATTCTGTGGTTTCCTTGTCATGGAGAAGCCACAATGGCACTCCCACTGATGTAT GCCACTGGGCTGATGGATTCCCTTTCAACATTCACCTCTACACTTCCCTTCTTCAGTCGATATTTGACATCAGGGATGAC ACATTAGTCCTTGGTGAAGTTGATGAGCTTCTTGAACTGATGAAGAAAACATGGACAACATTGGGGATCACATTGCCAAT TCACAATGTGTGCTTCACCTGGGTGCTGTTTCAGCAGTACATAGCAACTGGGCAGATAGAGCCTGACCTTCTTTGTGCCT CACATGCCATGTTGGGTGAGGTAGCAAATGATGCTAAGAGAGAAAAGGAGTCTTTGTATGTTAAGATTCTGTCATCAGTG CTGACCTCAATGCAGAGTTGGGCTGAGAGGAGGTTGCTTAGTTACCATGACTATTTCCTCAGAGGGAATGTTGGCCAAAT TGAAAGCCTTCTTCCTTTGGTGTTGTTAGCCTCAAGAATTTCTGGTGAAGATCTTTCAATCACAGATGGTGAAAAGGGAG AGAAAGGAGACATAACTATAGTGGATTCATCCGGTGACCGGGTTGATAATTACATTCGTTCTTCCCTCAAAAATGCATTT GACAAGGTATTAGAGGCAGTGAACTCCAAGTCTGCTGCGTTTGAAAGAAACAAAGAGTTGAGTGAAGTCCTGCTTCAATT AGCTCAGGAAACTGAAGTTTTGGTGATGAAGGAAAGGCATCATTTTAGTCCAATTCTGAAGAAATGGCACTCAACTGCAG GTGCAGTTGCAGCCATAACGCTTCACAATTGCTATGGGCAAGTGCTGAGGCAGTACATAGGTGAAGTGACCTCACTCACA ACAGAATCAGTTCAGGTATTGCAGAGAGCTGGGAAGCTAGAAAAGCTGATTGTCCAAATTGTGGTTGAAGACTCCACCGA GTGTGAGGATGGTGGCAAAAATGTTGTGAGAGAGATGGCTCCATTTGATGTTGATTCTGTCATATTGAGTCTTCTGGGAA AATGGATTGATGAATCATTGAACAAAGGCAAAGAGTGTCTGCAAAGGGCAAAAGAGACTGAAACATGGAATCCAAAGTCC AAAACAGAGCCATATGCACAATCAGCTGCGGAGCTGATGAAATTGGCCACTACAACTGCAGAAGAATTCTTCCAAGTTCC AATAGCAATTACAGAAGATTTAGTTCAAGATCTTGCTGATGGATTGGAAAACCTCTTCCTGGACTACATGAAGTTTGTTG CAGCATGTGGTTCAAGACAGAGTTACATTCCCATGCTTCCCCCACTAACCAGATGCAACCGTGACTCAAAGTTCACCAAG CTGTGGAAGAAAGCTGCTCCATGTGGCGCTAATTTTCAAGACCTGCATCACATGAAGGGGGCATTTGAAGGCCACCATCC TTGGTCCTCAACTAGCCGCGGAACGCAACGCCTCTACGTTCGTCTCAACACCTTGCACTACCTCCTCACTCACATCCACT CCCTTGAAAAATCGATCTCCATGAACCCGGGCATTGTCCCTTCAAACCGCCTCCGCTTCGCAAACAACCGCAGGGCTCAA AGCAATTCCTACTTCGAAAGTGTCAACCTCTCCATTCTAGCAGCATGCCAACATGTCTCAGAAGTTGCAGCATACCGTCT CATATTCCTTGACTCAAGCTTTGTCTTCTACGACAGCCTCTATGTCGGTCGTGTTCAAAGGGGTCAGATTAAGCCTGCAC TGAAAGTCCTCAAGCAGAATCTCTCACTGATGACCACAATTCTAACAGATAGAGCTCAACCATTGGCAATGAAGGAAGTC ATGAAGGCCTCTTTTGATGCACTCCTCATGGTCTTGCTTGCCGGTGGACATTCCCGCATGTTCCACCGGTCGGATCACGA GATAATCTATGAAGATTTTGAGCACCTGAAGCGGGTTTTCAGCAACTGTGTGGATGGGTTGATTGCAGATAATGTGGTGG ATGGTGAGGCTGCAGTGGTGGAGGGAGTTATTGCATTAATGGGGCAAAACACTGAGCAGTTGATGGAGGATTTCAGCATT GTCACATGTGAATCAAGTGGGATTGGCATCATGGGTAATGGACAGAAATTGCCAATGCCTCCTACTACAGGGAAGTGGAA TAGAGCAGACCCTAACACAATATTGAGGGTGCTTTGCTATAGAAATGACAGAGCTGCCGATCAGTTCTTAAAGAGAACAT TCCAATTAGCAAAGAGGAGATGA
Protein sequence (LotjaGi5g1v0158100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHHSRRESYPGTSSSRVDYYLHTGSRRLDAVPAGEDLPWPFQKLDGLGADEVRETAYEIFFTSCRSAPGFGGRNALTFY SNHDGNGGGSDGGKPNQVVTKPTSRVKKALGLKMIKRSPSRRMASASVVSTPSSPVAGAASPISHTVPLPFRPRRPMTAA EIMRQQMRVTEHDDNRLRKTLMRTLVGQMGRRADTIILPLELLRHLKPSEFSDSQEYHNWQKRQLKILEAGLLLNPSIPL DKSNTFATRLRDIITSSESKPIDIGKNSDTMRTLCNSVVSLSWRSHNGTPTDVCHWADGFPFNIHLYTSLLQSIFDIRDD TLVLGEVDELLELMKKTWTTLGITLPIHNVCFTWVLFQQYIATGQIEPDLLCASHAMLGEVANDAKREKESLYVKILSSV LTSMQSWAERRLLSYHDYFLRGNVGQIESLLPLVLLASRISGEDLSITDGEKGEKGDITIVDSSGDRVDNYIRSSLKNAF DKVLEAVNSKSAAFERNKELSEVLLQLAQETEVLVMKERHHFSPILKKWHSTAGAVAAITLHNCYGQVLRQYIGEVTSLT TESVQVLQRAGKLEKLIVQIVVEDSTECEDGGKNVVREMAPFDVDSVILSLLGKWIDESLNKGKECLQRAKETETWNPKS KTEPYAQSAAELMKLATTTAEEFFQVPIAITEDLVQDLADGLENLFLDYMKFVAACGSRQSYIPMLPPLTRCNRDSKFTK LWKKAAPCGANFQDLHHMKGAFEGHHPWSSTSRGTQRLYVRLNTLHYLLTHIHSLEKSISMNPGIVPSNRLRFANNRRAQ SNSYFESVNLSILAACQHVSEVAAYRLIFLDSSFVFYDSLYVGRVQRGQIKPALKVLKQNLSLMTTILTDRAQPLAMKEV MKASFDALLMVLLAGGHSRMFHRSDHEIIYEDFEHLKRVFSNCVDGLIADNVVDGEAAVVEGVIALMGQNTEQLMEDFSI VTCESSGIGIMGNGQKLPMPPTTGKWNRADPNTILRVLCYRNDRAADQFLKRTFQLAKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1020 | 1020 | 0.0 | – | |
| PANTHER | 1 | 1020 | 1020 | 0.0 | ||
| Pfam | 48 | 777 | 730 | 2.6E-289 | – | |
| MobiDBLite | 121 | 141 | 21 | - | – | |
| MobiDBLite | 123 | 140 | 18 | - | – | |
| ProSiteProfiles | 564 | 706 | 143 | 24.849 | ||
| ProSiteProfiles | 847 | 958 | 112 | 21.301 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0158100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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