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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0158900 |
| Transcript ID | LotjaGi5g1v0158900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING/FYVE/PHD zinc finger superfamily protein; TAIR: AT2G33400.1 FK506-binding nuclear-like protein; Swiss-Prot: sp|Q4V786|NFIP1_XENTR NEDD4 family-interacting protein 1; TrEMBL-Plants: tr|A0A0L9VBM0|A0A0L9VBM0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0158900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40854710..40859122) extracted from Lotus japonicus Gifu genome v1.2.
CGGCTTTTAAACTTGTCACATGTTCTCTCTCTCTGGGTGGCATGGCATGTATGTCAGATTCTGATCTAGTTGCTTTCATT ATTATTATATGACACCATATATATCAACAACATTCCTCACACTCTTCTTCTTCTTCTCTTCCCAGTAGAGGGCCCTTGAG ATGGGTTGTTTCCTGGCATGCTTTGGTTTATCCAACAAGAGAAAGCGTAGAAAGACCCTCTACAATGTCCTAGCTGGAGG ACACCAAGTAAGCAAGCACAACAAAACCCATCTTTAATCTTCAACCTTTTCATCACACCATGCATCACTCTTTCATTATT TGTATGATCTAAGAAGAAGCATGTTCAAATTTAATGGAATATCTGTTTTAAGTTCGAAAGAGTTGTGTTATCTTGCAGAA ATATGGAAACTATGAAGTTCTTGCCACAACAGAAAAATCCATTATTCCATATTCTGGTGTCAGGTTAGCATTTATTTATC TCTTCATTTTCCCTTAATATTTCATGAGTGGATATGGTAGATTATTTATGTTATTGGTTAGGGACAGAGATAAGAGAAAG GAGCAGAATGGTGTCAAAAGCAAGAAGAAGAAGAAAGTTACCTTCAATTTGAATGTACAGATATATGAGCCAGATCCCAC TGCTTATCAGGTATTGAATAATGAAGAAGAAGAAGAAAATAAGAACACTAAAGCAGAATCAGAAGGAAAGAGCTCAACTT CTTCCATCTTGGGAGAAGAATCTGCAGATTTGGGAATGAGATACCCTTCCAATTACAGATACTACAACTGCAGGGATAAC TATGATGAGGAGGAGGATGAAATTACATATGAGGAATCTGACATCGATCTCTCTGATGATGATGAATTTGATGATAGTTG GAGTGAGCAAAGTTTAGAAAATGATGAGGCTGAAGTATATGACAAGAACAGTGAACAGAATCAGAGGCCACTTGCTCCAA ATGGTGCTGATGTGAAATCCGATTCAAGTGGACGAGGCCGGAGCATAAACACGCATTCTGTTCTAATCCCAGTGGAGAAT CTCACTCAGTGGAAAGCAATCAAGGCAAAAGTTGCATCAAGTAAGCACAGGAGCAAGGAGAATGTTCCATTAGAGCAAAA GACAAGCTTGAATTTGTCACCTTGCAGCTTAGAATCAAATGCCCTTCAGTCCAAGCCTCTGTTGCAGGAAATTGCAGTTG ATGCTAGTCTTTCAAACTGGTTGATTGCTCCTAATAATCATGTCCCCAAGGCCACAATTCATTGTCAATGATGCAGCCAT GTCATTCAGAAACTTGGAAAATATCAATTCCATTAACAGAGCAATTTTTAATTGGTGAAGATTACACATGAAGGAGCAAT ACAACACTCCCAGACACCAATTTTAAAGGACGATGCAGCAAAGCATGATTCTTGTTTAGATTATTCATTAAGCAGAAAGA CAGTTGGCATGATTTCATCTAGTATGTGTGTCTAATTCTTATACTGTATTTTGATTTGTTTTGTTTTGTTAAAGGTTGTG TTGTGATCAATGGAGAGTGTGTTTGTCTGTTTATATTCACAGCTCTTGCTCATATTATGTGATAGGAGAAGAAGTGAAAG AGAGGAGAAAGAGAGAGAAAGAGAGAGAAGGGAACTGAGAATTGAGATTAGAGAGATAAAATTCTTGTTACAACTAACAT AACATCTCTAACTGCCTAATGGCCTTATTTATACTACTTTGCTGCCAGCTGTTATGACAGCTGTTCTAATTCTTATTTAA CAGATGCTAACAAGTGCATCATATTCCTAATTAACAGATGCTAAGTGATGCTAAGTGCATCATATCCCTCCCCTTAAAAC TCTCCTTGACCTCAAGGAGAAGCAGTAACATCAAAGAAGGGGAACTGCTGCTTCAGCTTATATAGCAATTCCCAAGTGGC CTCTTCTGCACTTTCCCCTTTCCACTGCACTAAGACTTCAGTAACAGCTCTATGGTGTTTCTGCACAGAGCGCCTCTTCA AAATCTTGAATGGTTCCTTAGGATTATCCATGCTGCCCCAATCTTCCGGAAGAGGATAAAGAGAAACTGTAGCATCTGGG CAAGGTTTCAGCAGGGAAACATGAAAAGTGGGATGAATGCGTGAGGTAGCAGGTAAATTGAGGGTGTAAGCAACCTTGCC TACACGATGTAGTATCTGATATGGGCCAAAGAAACGAGGGGACAGCTTTTGTGAAGCCCTAGAAGTGAGAGAGGATTGCC TATAAGGCTGGAGCTTCAAGAAAACCCAATCTCCAACTTGAAATTCTCTATCAGACCTGTGTTTATCAGCCAAGGTCTTC ATGCGAGCTTGAGCTCGAGCCAAGTTACCTTGCAACTTGTTGATCATCTCCTCTCTAGCAACAAAGCTTCTGTCCACAGC ATCCACCACAGTGCTTTGAGGGCAGTAAGGTAAATGCAAGGGGGGCGGCTGACCATAAACAACTTCATAAGGGGTAGCTT GGATTGCAGAGTGAAAAGTGGTGTTATACCACCATTCTGCCATAGGCAGCCAAGCAGCCCACTCCTTTGGTCTCTGCCAA GTCATGGCCCTCAAGTAATGTTCCAAGCAACGATTGAGGACCTCACTCTGCCCATCTGATTGAGGATGATAGGCAGTAGA CAAGCTCTGAGAAATGCCCAATTGTTGCAGAAATGCTGCCCAGAATTTGCTAGTAAAGAGGGGATCCCTGTCACTCACTA TATTTGCTGGGGCTCCATGAAGTTTGTAAACATTGTTGATGAACACCTCAGCCAAAGTGGAAGCTGAGAAAGGATGTGAC AAGGCTATGAAATGAGCATACTTACTAAGCCTGTCAATAACCACCCATATGGTGTCCTTGCCATGGGACTTGGGTAGCCC TTCAATGAAGTCCATGGCAATACTTTGCCACACTCCATCAGGTATAGCCAAGGGCTGCAGCAAACCTGGAACAGCATGAG GTTCATACTTGCATCTCAAGCAAGTCTCACACCTTTGAATAAACTCAGCTACACTCTTGCTAAGTCCTTTCCAATAAAAT AAGGACTTGATCCTATGAGTAGAAGCCCTTATACCCGAATGCCCCCCTTGATGAGAGGAGTGCAACCATTGCAAAATAAC CAATCTGACTTGGTCATTATTGGGAACTACCAATCTGTGTTTCCGGAAAAGGAAACCATCCACCACCCTGTAATGAGGAT GCTGGTCAGGAGAAGCATTCACCTCTTGCATAAGATCCTTGAGGGAAGAATCTGCAACATAGGCTTGTTGTATTAGATCC CACAATTCTGAAGAAATGGAAGAGACTGCCAAGTGTAGCAACTCTCCATGATTGGCCCGGGATAAGGAGTCCGCAGCAAC ATTGTCCTTTCCCTGCTTATACCTAATTTCATAAGATAGACCCATCAATTTAGTAACCCATTTATACTGTGCAGGTGTAG ACAACCTTTGTTCCAGTAAAAATTTCAAACTATGTTGATCCGTTAAGATGAGGAAAGGTTGAAGAGACAGATATTGGTGC CATTTAGACACTGCATGCACAAGTGCTAGTAATTCCCTGTCATAAACTGATAGCAACCTATTCCTGGGAGAAAGAACCTT GCTAATAAATGCAATAGGGTGCTTGTCTTGCATCAGAACTGCCCCAATTCCTGTACTGGAAGCATCAGTCTCCACTACAA ATGGCTTAGCCATATCTGGAATAGCCAATACAGGAGCAGTACTTAAGGCTTGTTTGAGCTGATTGAAAGCATGGGAAGCC TAAAATCAAATCCTCAGGTTCCTCAAAAACATCCTTAAATTCCTCTAGGACAGTGGTTTTATGTTCTTTAGTTGCAGGAT CCTCAGGTTCCTCTAAGCCAAGAGCACAACACACTTTCTCTTGGGAACATGGAAACAATTGTAGCATAAAACAAAAGCTT TCCTCAGCTACAATTTGATTAAGTTTAGCAGCTGAAACTACTCTATCCTTCCCACTCTTATCAGCTTGCAATCTCACCTT AAGGTGTCCCATATCAAATTCCATAACAAGGGCTTTGAAATCCCATGATATAGTTCCCCACTGAGTTAACCATTGTAAGC CTAAAATCAAATCAAAACTACCTAAAGGAAGAGCAATAGCACTAGTGAAGAAATCATACCCTTGCATCTTCAACTGTATT CCATCACATAGGCCTGTACCTTGCATGACTCCACCACCTGCTACAGTAACTTGTAAAGGCTTCAGTAGAGGATGCACGGG TCTAAGGTAGCTCAGGCCTTCCTTGCACAGTTTTTGATCAATGAAGTTGTGTGAGCTTCCAGAATCAATGAGGACATGAA TCCTCTTCTTTCCTATCCATGCAGTCAACCTCATCAAAGGATATTCAGAGTGATATGATTTGGGAACACAAAGGATCGTC TTGAAAACCGGGG
CDS sequence (LotjaGi5g1v0158900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGTTTCCTGGCATGCTTTGGTTTATCCAACAAGAGAAAGCGTAGAAAGACCCTCTACAATGTCCTAGCTGGAGG ACACCAAAAATATGGAAACTATGAAGTTCTTGCCACAACAGAAAAATCCATTATTCCATATTCTGGTGTCAGGGACAGAG ATAAGAGAAAGGAGCAGAATGGTGTCAAAAGCAAGAAGAAGAAGAAAGTTACCTTCAATTTGAATGTACAGATATATGAG CCAGATCCCACTGCTTATCAGGTATTGAATAATGAAGAAGAAGAAGAAAATAAGAACACTAAAGCAGAATCAGAAGGAAA GAGCTCAACTTCTTCCATCTTGGGAGAAGAATCTGCAGATTTGGGAATGAGATACCCTTCCAATTACAGATACTACAACT GCAGGGATAACTATGATGAGGAGGAGGATGAAATTACATATGAGGAATCTGACATCGATCTCTCTGATGATGATGAATTT GATGATAGTTGGAGTGAGCAAAGTTTAGAAAATGATGAGGCTGAAGTATATGACAAGAACAGTGAACAGAATCAGAGGCC ACTTGCTCCAAATGGTGCTGATGTGAAATCCGATTCAAGTGGACGAGGCCGGAGCATAAACACGCATTCTGTTCTAATCC CAGTGGAGAATCTCACTCAGTGGAAAGCAATCAAGGCAAAAGTTGCATCAAGTAAGCACAGGAGCAAGGAGAATGTTCCA TTAGAGCAAAAGACAAGCTTGAATTTGTCACCTTGCAGCTTAGAATCAAATGCCCTTCAGTCCAAGCCTCTGTTGCAGGA AATTGCAGTTGATGCTAGTCTTTCAAACTGGTTGATTGCTCCTAATAATCATGTCCCCAAGGCCACAATTCATTGTCAAT GA
Protein sequence (LotjaGi5g1v0158900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCFLACFGLSNKRKRRKTLYNVLAGGHQKYGNYEVLATTEKSIIPYSGVRDRDKRKEQNGVKSKKKKKVTFNLNVQIYE PDPTAYQVLNNEEEEENKNTKAESEGKSSTSSILGEESADLGMRYPSNYRYYNCRDNYDEEEDEITYEESDIDLSDDDEF DDSWSEQSLENDEAEVYDKNSEQNQRPLAPNGADVKSDSSGRGRSINTHSVLIPVENLTQWKAIKAKVASSKHRSKENVP LEQKTSLNLSPCSLESNALQSKPLLQEIAVDASLSNWLIAPNNHVPKATIHCQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 286 | 286 | 1.7E-91 | – | |
| PANTHER | 1 | 286 | 286 | 1.7E-91 | ||
| MobiDBLite | 92 | 119 | 28 | - | – | |
| MobiDBLite | 142 | 171 | 30 | - | – | |
| MobiDBLite | 142 | 208 | 67 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Male meiosis II | A cell cycle process comprising the steps by which a cell progresses through male meiosis II, the second meiotic division in the male germline. |
Expression pattern of LotjaGi5g1v0158900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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