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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0159000 |
| Transcript ID | LotjaGi5g1v0159000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Low affinity potassium transport system protein; TAIR: AT2G33390.1 hypothetical protein; Swiss-Prot: sp|B9KGL7|MNMG_ANAMF tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TrEMBL-Plants: tr|A0A151T140|A0A151T140_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0159000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40866575..40870740) extracted from Lotus japonicus Gifu genome v1.2.
GTATCAATAACTCCTACTAATTCCCTTTGTCGTGGATGTTCACACTCAGCGATCAGATGGACACGAAATGCCCTTTGTTT TAATGGATGAATATTGAACTTCTAACCTCATACTCATAGTTAATGGACTAGACATGGCACATGACCTTCGTTAAGTCAGC CCATACCAAAGGATTAAGGACGACTTAAATGTGTGTATACATCAAGAACCTGTAAGCCATGATACATGAGATTAGTGTGC ATTTCTCCTTAACCATAAACGCTAACCTAAACCATGAGGTGTAGTTGTTAGCTCACTTTCGTCAATTATAACTAAACTAC ATTTTACATTGCTTTAGCCTTTATATAAAGTACTTATTATATGATTGCTGCAGTAAATTATTTACAAGTAGATATAGATA TGCAAAAAAGAATATGTTTGATCCTTAATTTTAGATGGTGTTTATTTTTCTCTTCTTTTTTTTTTTAATTGAAGAAACTT GTATTCTGGACATCAATTCATATTCTGGTTGTGGATCGTTTTCAGTATGCAACCACACAAATTTCTGTCATTTTCATGTT CTCAACTCACAGATTCTCTCACGGCTCTTCCTTATTCTGAGTGACTGCCTTCAAACTTATCTTTTTTCTTTCTTCTTCAT TCTGTTTCCCCTGTTCGAACTACTTTGAATTCCTCATTCAGTTCCTCCCAAGTTTTGAATTTTGGAATTGGGTTGTGATT TTCAGCCAAATGGGTTTCTTCCAAATTTCTAAATTTCTCTGAATTTCGATTTTTTTTGCATCTGAGGAAAGTGTGTTATT GTTGATGGATACTGAGTCCACTAAGGATGCTAATGGCTGCTGCGTGAACAAGCCTGTTGCTGTGGCTGTTGTGGTTTCTT TGGATGGTGGAAAGGTTGAAGATCACGCTAATGGAGATAGTGATAGTCATTCCAATTCTTTGTTGGCACTTCCAAGAGGA GGATTATCACGGAAGTCAGAGAATAAGACATATAGAAGAGTGCAGTGGAATGATGCACTTGGAAACAAGCTTGTTGAAGT GTTGGAATACGAGGCCAGGTAACTTGTGTTGTGTGTGCTAAACTTTGCTTAGTTACATTACATTGCAGCCACGTAGTTAA GAGCCTATACACATTACACACACATTGGATTCCTGTTTTTAACTTCCTGTCATTCTTGTTACCTGCATTATATGACTACT AGCATGTTTGGATCAACTTTTATTTCATCAGGATCAATTCTGAGGCTCAGAAGCTAGTCATAGAAGCTTCTTCGCAGAAT TGATAGTCTGCGGAATTAATTGTAGATAAGGGTTTCTAAACAAGCACTAAAAACTTTTGTGGTATAGTGATGTTAAAGAA ACAAAACTATTTTTTATTTTTTTGTAAGTAGCTAAACATGTATTATGCGAAGTAATATGAATGCATGTTTGTTATTCTAT TTTTGCATATGGGATCTTTGGTAAATTAACTACTCTGCTGCATTTAGTTCATTAACTCTTAATTCCATTTTCCAAACTAA GACTCTCAGGGCAAGGGAAGCACTGTTGCGAATGTGCTGAGTTGTTTTAACCTAAGTTGGTACAACTTTCAAGTCTCTGT CTGAAGTGGCAATTTGAAATATGAATGAGGAACTGGTTGGGTTTGGGTTGCATCATTGTGTAGTATCTATTTGCTTGCTA TATAATATTTATGTGGTCATAATTAGTTCTGTGTATTTAGAAGTTATTTGAACCAGCATATTCTTCTTAATTTTGGCATA TTTGCTCTTCTTTTTTCATTTTTATTCTATTCTACTCTCTCTCTCTCTGGTCTTTTCTGTCACTGCTGTAAATTTCCATG ATATTAAATTGGAACCTGCCTCCCTACTACTAGATTATGTAGTTTTAACCCAAGTTTTGTCCTTTTTTTTCCCTTCTTAA TTGATAGCTTAGCTTGCTTTTGGCTGTCTTTAGTGCTGTAGGCTAGTCCCATACAAGTTTCCCTTTGTAACATATCATGT CTTATAGTTCTTAACTTCCTATTTAAATGCTCATCTGACCTGAAAAGCTTAGGTACTCCAAGTTTCTCTGGGTAGGACAG TATATAGGGCATCTTTGTAGCAATCTAAAAATATTACTTCTCTAAGCTCCTATTCGACGGATGTTCAATAGGATATTAGG ATTCGAGGACACTTTGGTGTTTCTTTTCCATTTTATTATCCTTATTATACTAACTATTCTTCTTATGTGGAGGATAGTTT GTCCACTGTTCACTGCTACTTTCTCTTATTTCTACTATCAAGATTTTTATGTCATACTAGTGCCAAAGAAATTGTGAATA CTTTGAGTTGTTGCTAAGAACTCTTGAAGCATTAAATGAAAAATGAGAATTTAAAAAGTTCATTGTTTAAGACTTTATCC AGGCTTGTAAAATACCAGATAACACTTTTGCTCCAAAGATTAGATCTTACCAGAGAATACTTTTATGCTCTTGTTCTGGC ATTCATGGCAACTAAGTCAATATGGATTATAGACTCATTAACAATCTCAAGCATGTTTCTTGATTATCGGGGTTTTCTTT TCTTTTTAAATTAGAAAATGCGTGTATTCCTCGTCTGAATTTATTATTTGCATATGCCTAATACAATGGTAGGACACGTA CTTAAATATATTTTTTTTTTGCCTCCATGTCCTCTATTACTATCTGGATGACTCCTTTTTTGGATGTATCATTGTAGCTA ATTGTGTAGTTTGCCCTTTATCATTATATACTTATTCCTTTTTAAAATTTATTGTATGTTAGGCATTCCTGCTATTCCCC CATTTTCCATCAATTTCCCTGACTACCATATTTTCCTTCATGGGTTCATTTATTTTTTTCTTAAACAATGTTCTTTCACG TTCTTAGACTCATGAAGTGGAGAAGAAGAGGTGTAAAATTGAATTTGGTAATACCCTTTCTTGGTCCTCCTCTCAAAAGG GTGTTGGGAAGTAACTGTTTTTACTTGCTCTTGACCCTGATCACTAACATTTGTAATGACTTATATTAACTATTAAGTAT ATAACCGTAATGTAATACACCATGACCTTTGGTACAAGGAGATGCAGGGGCTTATGATTCAGATCAGCCCTGAGTGGACT CTAAAGGATAACCAATAATAATTAAATTGAGGGAGGGTTTATTAGCCAACATTTCTGCTGATTGAGACCATTTCATAAGA CTAACATTAGGAGGAATAAAATCGGTCGTAATCTATACTGAAACAGCATTGAAATGGACAAACTTATCACTACTGCAGAA ACTACAGGAGAAAGTGGAGCAGAAATTATCACAGGAAGTAGTAAACCACGCCTACTTATTATACAAGTTTAAGTATTTTC AATATGAATTTAATGTAACAAAATAAACTTGAATATGATAATTAACCCTTGGGTGTGTCATATATGCAGAATTGTCTCAC ATTTGGTCTCCCAATTGTGTGTGCAGTGATGTTAGTGACTCAGAGGATGATGAATCGTGTGTCTGTTCAATAATGTAGAG ATGCTGTCTGAAACGTTTTGCTGGACTATTTGAAGGAGAACTTTTGGGGCCTGTGAAGCCTGAATATGAAGTAATTACAA TGATTTTGGGACCAACTCTTCAAAAGCAGCTCCTTGTATTTGCCACTATTTGGATCCAGTTTGACATGATTTGTAAGGTG GTTTTGCGAGTTCTCTGTGCAGATCAAAGCCAACACATTGCTTCCAGAAGTATGATTTGGACAGTGCTGATGGTAGGGCG GCTTCCATGTATGTAAATGAATTTTCATGTTTAGTCATCTGTAGTTCTGTACTGTTTCTTTATTATACACTCAATTGCTT TAATCATGTTGCTAATGGAAGAGGGGATACCTCTGTCTCTTTTTCCTTCCTTTTATCTTCTCAAATATGTGGAATCAATT TTCATGATTCAAGTATTTATTCTCATGTAATTCTGCTGAAAGAAAGGGTTTTCTGGTGGTCTTGTGTTGCTGTAGAATCA GTATGTGTTCTTTTTTTGTATTCAGCTATTCTCTTATTTATCAGCCTATGTTACCTTTTCTAATTGATTCAAATATTGCC TTGCAGAATGTCTTTTATGAAAGCAATGTACCATAATGATGCACTTAGCATCACTTAGCATCTGTTAATTAGGAATATGA TGCACT
CDS sequence (LotjaGi5g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATACTGAGTCCACTAAGGATGCTAATGGCTGCTGCGTGAACAAGCCTGTTGCTGTGGCTGTTGTGGTTTCTTTGGA TGGTGGAAAGGTTGAAGATCACGCTAATGGAGATAGTGATAGTCATTCCAATTCTTTGTTGGCACTTCCAAGAGGAGGAT TATCACGGAAGTCAGAGAATAAGACATATAGAAGAGTGCAGTGGAATGATGCACTTGGAAACAAGCTTGTTGAAGTGTTG GAATACGAGGCCAGTGATGTTAGTGACTCAGAGGATGATGAATCGTGTGTCTGTTCAATAATGTAG
Protein sequence (LotjaGi5g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDTESTKDANGCCVNKPVAVAVVVSLDGGKVEDHANGDSDSHSNSLLALPRGGLSRKSENKTYRRVQWNDALGNKLVEVL EYEASDVSDSEDDESCVCSIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 101 | 101 | 1.2E-38 | – | |
| PANTHER | 1 | 101 | 101 | 1.2E-38 | ||
| MobiDBLite | 30 | 53 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to light intensity | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus. |
Expression pattern of LotjaGi5g1v0159000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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