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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0159600 |
| Transcript ID | LotjaGi5g1v0159600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF3527 domain protein; TAIR: AT2G33360.1 cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527); Swiss-Prot: sp|Q8YJD9|XERC_BRUME Tyrosine recombinase XerC; TrEMBL-Plants: tr|K7N4M6|K7N4M6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0159600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40955289..40961431) extracted from Lotus japonicus Gifu genome v1.2.
CTAGTGGTAGCAACAGCTTTGGCTTTAGTGGAGTCACATAGCTATCGTGCGCACCAGCTCATGTTTCTTCCTCAATTTCT CTATCTATCCGTGTTGGAATCCTTTGGACTTTGCATTTCAATACAATACAATACAATACAATACACTCTTTCTAGTTCAT CAAGCAACAACGTTGTGGGTCCTGTCCTATAAGACTAGCATCCTGATTTTTAGGTGTGAACTAGGATCACTTCTCTCTCC TCAATGGAGTACTAGATTTTCATTTCAACCATGTTCATGCCTCCACTATGTCACTGTTGTTGGATTAGTTTAGTTTAGTT TAGTTTAGTATTTTTGTTCTCTCCATCAAATCAAATACAAATAAATACCATTGCACCCTTTTCTTGAACTACTATAATAA AACAGAGTTTTCTGGAAGGAACATAGTATCCTAGTAATTACTTGTGGTGGTGGTTGTGTGTTGATCTTTGTTTCCCATGT GCTGACTTGGTTGTTTTCAACTTTTTTTGTTGTTATTTGTGTCCATTTCCTCTTTCCCCATTTGGGTTTTCTCTTCTCCA CTTTCCTTTGGTCTTGGGGTTGAAAAGGTCAAATTTTGAGGATCTAAAGAGTGTTGTTGTGTGAAAAACAGCTACTTCTC TTCATCTTGCTAGTGGGTTTGCTTTCATTTTGTTGAAGTGCTCTTGGCTTGGCTCTTCCTGGATCCAGGTTTAGCTGGTA AGAATAAAGTTGCTCTCAATTATTATTATTTGTATTTGCTTTTGTGTTTGTTTCCTGTCTCTCTTTATTGATTTTGTTTG TTTGTTATTGGAGCATTTTCCGGGAACCGTTTGTATGGATTTAGTTCAGTTAATTTCTGTTGTAAGATGGTGGTTGACCC TTTTGAGATTTAAGGTTGTAAGATTGAACCTTGTTCTTTACTTCTTCCTCACTTATTTTATAGGCTTTTGGTTTCTTTTT TTCAGTGACAAATAATATAACAGGGTCAACTATTGGTTAAATTGAATTGTGAAATTATTTGTTCTATGAGTGAATTTCAC TCAAGTCATTAATGTGTAAGCAGTTTTGTCTGAGAATTCTTATTTTCTAATAAGAACATGCCCATCTGAAATCTTTATGT TTAGGGACTATAGGTTTCTTTCTTCACATGTTTGTGTCTGTTATATGTAATTTTAAATGGAGAGTTTCATGCCATGATAT ATAGAAATCTTCCATTCTTTTTGGTTATAATTGATCTCATACAGGTAGACTCTTTAAGAAGAATTGCAACTTTTCAAATT CATCATTTTGCAAACAATTTTATTTTTGGTTTGTGACAGTGTTTTGTTTGTTTTTTCTATTGTATGTGTCTTTATTGAAG GAAGATGACTGTGATTGAAGGTTCCAACCATTAGTCCTGAATAACTGAGGTAGAAGATGGAAAGTACAGGCTTGTGGATT CAAAAAGAGGGCCACATGAAAAAAGATTCATTGAATGACAAGGAGTTATCAGATGAAGACTCTTCAAAATCACAGTTCAA GAAGTTGATTAAACGGTCAAACTCTCATCGTGCAATAGCTGTAAATGCTGTCCAATCAAAAGTTAGTAAATTTCTCTTCA AGGATTTATTTGATCGGCGTGTCCATGGACTAGACAATAGGATTCCAAAGCATGTGGTGAGTGTTGACGAGAAATATCTT CGCCGCTGCCTAGAATTGTTACACAACAGCGCGTTAAAAGCAGCTCAATGCAACATACCTGTGAGCTTAAGAACCACAAA CATGATGAGCTTGAATTTGGCTAATTTTTTTTATGGAAATACATGTGGTTCTTTTGTCATTGAATGTCCTGTATCCACTG ATATTGGGAGAGTAGTAATCAGTGCTGATGGCGGAGAACAGTGGCCTTTAGGTGCAGTAATGGGGAGCAAGAGTATGATG AATATATTGAATAGTGCTCTACTTCAGCGGTTTGGTTCTTCAGATAGAAAAGAAACTTTGAACAAGATGAACTTTTCTGA TGCAGAAGGATTGATATGTTATGATTTTATGGACTCTCCCAGTGATTTAAGTATCTCTTCATCGTATAAACCAGAAAGGG AAACACGGTTGGTGCCAAGCCTTAAGCATGGCTCCATTTCTGTTCATGAAAGACTTGCTTCCACTGCTAGCACTTCCTCT GCTTGTGCAGATTGGTTGTCTTCAGCTTCTTCTACGTTGTCTCAGGGAATGATCCAATGTACATGGAAGCAAGGGATTCC TTATTTTGTTTTTTCTGCAGATAATCAGAAGGAGGTTTATGTAGCGAAATTGAGGAAGGTAGACTCGGCAGAGGATAAGG CTTTGGACTACGTATACCAGTTTCACTTGAACAAGGGAGGTCAAAAGGTTCGTGATATTCCTGACGGTGATTTGCAGCTT GCTGGGAAGATGAATGTATCAACGAGTTTCACTCTCTGCCGAAACAATTGTAGAATAATGGAGACGGAGTTTACATTATT TCATAACATTGAAATATTGTCCACATCAGAGCATTCTCACAGGAAGAACAAGGGCCTGACGAAAAAAGTGTCTAACGTCT TCAGAACTAGTCCATCTTCAAAACGCAGAACGCTCTCAAAATTTGGCGGATCTAGTGCCATAGATGAGAGTTGTCTGTGG GAGCCGCATGCTTTTGGAGGGACCAATTTGTTAGAGTCTAATGTTCCTCCCAATTTTGAGATGGCTGCCATTGTTGTGAA AGACCATCTTCCTTGTAATAAGCCACAAAAAGTAGGAGGCTGGGGTTTGAAATTTCTCAACAAATCTGGAGCAAAGCAAA TTGAGTCGCCTTCTGAAAATTGTAATCAAAATGATGGTGACTGCTCATCTAGCATGAATATTCTAATTCCGGCCGGTCTT CATGGTGGGCCAAGAACCAGAAATGGCGGCCCATCCAGTTTGATAGATAGGTGGAGATCCGATGGCCACTGTGACTGTGG TGGTTGGGATGAGGGATGTCCTCTGACAGTACTTCAGAAAAGATCTAGCAAGCCACAGGTTCTATCTCAAGTAAATACAC AAGGCGAATGCAAGTCTGTTGATTTAATTTCTCAGGTGTGTTTCTATTCCATATTCTATTCAGGGTTGTTGATGGCGGAT AGCGTAGCGGCAAGCACAAAAAACGCTATAGCGCTCCGCTATAGCGGCAAATAGCAGTGAATAGTGATGTAGCGGTGAAC CCCCAGGGCGCTACGCTATAGCGTGCTATTAACAAGCCTAATTCTATTACTATTCTTTCTTTATTCTTGTCATGGAACAA TTATCCCAAAAGCTTAAGGTGTTAGGTGAAGACACATGAACGGTTACTTCTAACACGCACCCTCACGCAAGAACGTGAAC AATGCACATGCCCACCCACCTACCATGTGCTGAAATTCAACTTTTTATTAGAATAATTGAGGGCAGTTAGGATTGAACTC TAGACTACTTAGTTATAGAGGCTCTGGTTTCATGTCATGAACTAATTATTCCAGAAGCTTAAGCTGTTGTGTGAAGTCAC ATGAATGGTTCTATATTATACTTCTGACATTTCTCTCTAAATAATGTTAGTGATATATTTTTATATCATCAAATGGGAGA CAAAATAGTATGGGAACTGTAAATATTGGTTTTGGCTAGATGTGTTTTCCCCTGTCTTTGTTGTGGGTTTGTCCTCAAAC TATCAAATTCTTTTCCTCAACGTTATGCTTACAAAAACCACCAAGCACCAAGCCCTAGATGGGGCCACGTGGATGTTGGA CACCATTGGGCTCTACTAGAAATCAAAGTTTCAATAAAACCATTTAATGGTTTCTCTTGTATTTTTCTTCCGTTTCTCTC TACGTTTAGTGAATAGGAAAATAACTTTGTTCATTTTTCTAGAGTTTCCATAACCTGTGATTCTGAAATAGATTTTGCAG CAATCTCTCTCAAGATGAGGCCAATTTTATATTTATAAACTAGACAGCCGTGCATTTGTAATCTTAAATTTACTTATGTA CTTTCTTGACAATTGTTTATGTAAGTATGCAATGAGATGACCATACCCCCTCAAATTTCAGGGTTCAAGTGATTTCAGCC CCACCTTGAGGATGGTCAATGTTCATGATGGTCTATATTATATTCATTTTCACCCACCTCTTTCTGCACTACAGTCGTTC TCCATTGCTGTGGCGTTAATTCATATGCAAAGTCCTAGTCTTCGGCCCAAGAGTGCACAGGAGTGAAAATTGAGGTTATT TAGCAGTCATAATTCTCTTACTGTATTATAAAAGCAATTGATGAGAAGATTCTGGTTGGTTTTTATACATGGATTGGGTT TTTGTTCCTATGTTTAGGTTTGTTACTTTCCATACTTTCAGATGTATCTTATTTAGGAGAACTACTAGCTCTGTTTGTCC CTTCTGACAATTCATAGACAAGAGCAATTGTAAACATCTTTTCCCTCATTCTTTTTGATGAAGAGGATAGAATGTACAAG GGTTTGCTGAAGAAACTTGGTAACTTGTGGTATTAAGGTTGGGTTTGTTATAGTAGCTGATATGAAGTGGAATTACCACT GAGATTGGGTTTGTTATAGTAGAACATATGTAGCATTGAGATTGGTAACTTGTAACTAAAGGAAGTGGAATTACCACTTA TTCTGAAGAATAACTATTTGAAGATAGCTATTCAACAATGGATTATGAGTTATGACTCATATTTTGATATGAAGCATAAC AGAGATTTTGTTTCTTTTAATTTCTCTTGTCGAATGAATTACGGGAGTCCCCATTTTTCTGATCGGGAAGTCTTTGCAGT GTTACTGATTTTACTAGATGCTGCATGATCCATTTGCTACATCTTAACAACCCATATTTCATATCTGTTAGATGACTATA AGTGTATGATCCAATCGCTGCCTCTTAATTATGCTCCATCTCTGTCAGATGACTTTAAGTGCGATTTCACAGTGGCTATT TGTATTTGGATTATTTGCATAACTTCAACTTTTAGCTACAATGTTGATATACCTACATGAATGACTCCATTCGCAATTTA TCTTTGTTGTAAAGCTTTTATTTTCCAGAGACTTAATCTTTTGTGAGGACCAAGCAATGTGGAGTTCGCAAATCAGGACA TTTCAGTAAGGTAAAAAGCTTGATGTCTGCAGAATGTTATTCAGATTACTGCAGCTATCTAATTTCAATTTGTTTACAGG TGATGATAGAAGGATAATATAAATGATCCTTCTTAATCACATGTCAATTAAAAAGAAAGGGAATAAAAGAGGATCTGATA GATGAGGATCTGATAGATGATCCGTTAGATGAATTCATCAACTAAAAAGTTTGTAGTAATCATTTTAGCATCAGTTGGAT TGAATGTCTATCAATACCAGTTTCATTATGTGATTTGCATATGAGCAGATGATTTATTTATGTGATAGTGAGTTCTTCCC TTTTTTTTCATGTGAATCATATTGCATTCAAAGTTTGCTTGAAAAAGTAGATCACAATTTATTGTGACTGTACTTGTTGC TTGTTTCTGTGTCTTGTTTCCATTCTATTGTTACTTTCTTGTGTGCTCTTTTTGCGATGAATGCTTTGTTTAAATCATGT AAATGTATAATAATCAAATAATTTGGTGGAACGCTAGCATCCTCCGCTCTATACCTCTCACCCAAAAGTTAAAACAAAAG AATGATCAATGAAAGAACAGATATTCAACATATGAGAAATTGTGAAGTTATGATGTATATTTGTGCAAGTAGTTAGATCT TTCCCTATTTTAGATTATGCACATTCAAAATAAGAAAATCTAAAATCTTTTGTGTGCAGTAATGTTCTTTAGTTTATATC TTAGCATGAACACCTTAATGGAGCTTTGGTGGTCAAATAACTCCTGAGTCTTAAATCCTGCAGTGAGTGACCTAATCATG AGTTTTGTACTCTTGCTACTTGTATGGTTCACAAGGAGAAAGATATGTATATGGCTTGAAACCAATGACATTCAACTTGT TATTTTATTTTGTTCGTGCCTACTGTCTTCTTTATATTTGTGGGAAAGAAGAATTTTTTATTTAATTAAATTGAGTCACA TGGCAAATATTTGAAATCTGATTGGTTGACGGTATAAAAAAACTTTACACTGTCAGTGCATCA
CDS sequence (LotjaGi5g1v0159600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGTACAGGCTTGTGGATTCAAAAAGAGGGCCACATGAAAAAAGATTCATTGAATGACAAGGAGTTATCAGATGA AGACTCTTCAAAATCACAGTTCAAGAAGTTGATTAAACGGTCAAACTCTCATCGTGCAATAGCTGTAAATGCTGTCCAAT CAAAAGTTAGTAAATTTCTCTTCAAGGATTTATTTGATCGGCGTGTCCATGGACTAGACAATAGGATTCCAAAGCATGTG GTGAGTGTTGACGAGAAATATCTTCGCCGCTGCCTAGAATTGTTACACAACAGCGCGTTAAAAGCAGCTCAATGCAACAT ACCTGTGAGCTTAAGAACCACAAACATGATGAGCTTGAATTTGGCTAATTTTTTTTATGGAAATACATGTGGTTCTTTTG TCATTGAATGTCCTGTATCCACTGATATTGGGAGAGTAGTAATCAGTGCTGATGGCGGAGAACAGTGGCCTTTAGGTGCA GTAATGGGGAGCAAGAGTATGATGAATATATTGAATAGTGCTCTACTTCAGCGGTTTGGTTCTTCAGATAGAAAAGAAAC TTTGAACAAGATGAACTTTTCTGATGCAGAAGGATTGATATGTTATGATTTTATGGACTCTCCCAGTGATTTAAGTATCT CTTCATCGTATAAACCAGAAAGGGAAACACGGTTGGTGCCAAGCCTTAAGCATGGCTCCATTTCTGTTCATGAAAGACTT GCTTCCACTGCTAGCACTTCCTCTGCTTGTGCAGATTGGTTGTCTTCAGCTTCTTCTACGTTGTCTCAGGGAATGATCCA ATGTACATGGAAGCAAGGGATTCCTTATTTTGTTTTTTCTGCAGATAATCAGAAGGAGGTTTATGTAGCGAAATTGAGGA AGGTAGACTCGGCAGAGGATAAGGCTTTGGACTACGTATACCAGTTTCACTTGAACAAGGGAGGTCAAAAGGTTCGTGAT ATTCCTGACGGTGATTTGCAGCTTGCTGGGAAGATGAATGTATCAACGAGTTTCACTCTCTGCCGAAACAATTGTAGAAT AATGGAGACGGAGTTTACATTATTTCATAACATTGAAATATTGTCCACATCAGAGCATTCTCACAGGAAGAACAAGGGCC TGACGAAAAAAGTGTCTAACGTCTTCAGAACTAGTCCATCTTCAAAACGCAGAACGCTCTCAAAATTTGGCGGATCTAGT GCCATAGATGAGAGTTGTCTGTGGGAGCCGCATGCTTTTGGAGGGACCAATTTGTTAGAGTCTAATGTTCCTCCCAATTT TGAGATGGCTGCCATTGTTGTGAAAGACCATCTTCCTTGTAATAAGCCACAAAAAGTAGGAGGCTGGGGTTTGAAATTTC TCAACAAATCTGGAGCAAAGCAAATTGAGTCGCCTTCTGAAAATTGTAATCAAAATGATGGTGACTGCTCATCTAGCATG AATATTCTAATTCCGGCCGGTCTTCATGGTGGGCCAAGAACCAGAAATGGCGGCCCATCCAGTTTGATAGATAGGTGGAG ATCCGATGGCCACTGTGACTGTGGTGGTTGGGATGAGGGATGTCCTCTGACAGTACTTCAGAAAAGATCTAGCAAGCCAC AGGTTCTATCTCAAGTAAATACACAAGGCGAATGCAAGTCTGTTGATTTAATTTCTCAGGGTTCAAGTGATTTCAGCCCC ACCTTGAGGATGGTCAATGTTCATGATGGTCTATATTATATTCATTTTCACCCACCTCTTTCTGCACTACAGTCGTTCTC CATTGCTGTGGCGTTAATTCATATGCAAAGTCCTAGTCTTCGGCCCAAGAGTGCACAGGAGTGA
Protein sequence (LotjaGi5g1v0159600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESTGLWIQKEGHMKKDSLNDKELSDEDSSKSQFKKLIKRSNSHRAIAVNAVQSKVSKFLFKDLFDRRVHGLDNRIPKHV VSVDEKYLRRCLELLHNSALKAAQCNIPVSLRTTNMMSLNLANFFYGNTCGSFVIECPVSTDIGRVVISADGGEQWPLGA VMGSKSMMNILNSALLQRFGSSDRKETLNKMNFSDAEGLICYDFMDSPSDLSISSSYKPERETRLVPSLKHGSISVHERL ASTASTSSACADWLSSASSTLSQGMIQCTWKQGIPYFVFSADNQKEVYVAKLRKVDSAEDKALDYVYQFHLNKGGQKVRD IPDGDLQLAGKMNVSTSFTLCRNNCRIMETEFTLFHNIEILSTSEHSHRKNKGLTKKVSNVFRTSPSSKRRTLSKFGGSS AIDESCLWEPHAFGGTNLLESNVPPNFEMAAIVVKDHLPCNKPQKVGGWGLKFLNKSGAKQIESPSENCNQNDGDCSSSM NILIPAGLHGGPRTRNGGPSSLIDRWRSDGHCDCGGWDEGCPLTVLQKRSSKPQVLSQVNTQGECKSVDLISQGSSDFSP TLRMVNVHDGLYYIHFHPPLSALQSFSIAVALIHMQSPSLRPKSAQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 603 | 603 | 1.9E-218 | – | |
| PANTHER | 1 | 603 | 603 | 1.9E-218 | – | |
| Pfam | 259 | 596 | 338 | 4.6E-124 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0159600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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