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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0159700 |
| Transcript ID | LotjaGi5g1v0159700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger protein CONSTANS; TAIR: AT1G04500.1 CCT motif family protein; Swiss-Prot: sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4; TrEMBL-Plants: tr|V7BI39|V7BI39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0159700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:40978165..40982815) extracted from Lotus japonicus Gifu genome v1.2.
GACACCATCTTCATAGGCATACATAGCTAACTAACTAACTCTTTCTCTCTCACAACAACAAACAACAACATTCTCAATTC TCTCTCTGTCTCCTTGCTGTGATGATCCATGTTCTTCTTCCTTCTTCTCCCTTCTCCTTTCCTTAATTTAAATCTCTCAC CATTATCATGGACACTTCTTGTGCACTTAGCAGCCTAATTTATCATATACATCTTATACCTACCTATACATTTTGTATTT CTTGATTTTCTGGGGTGCCTTGATTTCCTCTTTTTTGTTGCGAGGGACTCACACACCATGTTGCAGGATGTTTTTGATCA GCAACAACAACTGTCGCCAAAGGCGGCGGCCGAGGAGCAACACCAACTTCCCATTGTAATGATCACCCCATTCTTCATTT CCCTTGTTTGTAATGCATGTGTTGTTCTTTTCATGCATGAGTGATTGGTCTATTTGTTGTTCTTTGTTACAACTTGCAAG TTTGGTTTTTGCATCAAATTAAGTTTAAGTGCATATTTGAAACTCTGTTGCAATTGATTCCCTCTGGGGAGAAGCTTATG TTTGTAGCTTCGAGATTTCATAAATGGTTATAATCGATAAAGGAGAAGTCGATCCAAACAAGCTATAGATATTATTCCCC CGACTAATGCTTTTCCCTTAGCTAATAGAATGTCAGTATCATAATCATTAGCTGTTATAGAAATCTAGAAGTCACATTAT CAAATTCTTTTCGAGGCATCCCTGAAAATTTTACATACAGTTGGTGAGCATAATGCTTATTGACTAGCAATAAGAAGGGA TATGAGATTCCACAATAATAGGCTCTGTCCTTTTTTTCTATTATCCTACCCAGTCCATGACAATAACATGCAACCAAAAT GTCATTTTCTGAGGACAGTGCTGTAAAGTGCATAGCAATCTCAAATTCTACATAATTTTCAGTGTGATGATCATTTAAAC ATAGCTTTCAATTATTTTGGAATATGTAACTTTTTGTTCTTTTCTATCCTTTGCTAATTTTGATATTCTAGTTCAACTAG AGAGGCAAATTAAAGGGACTTAAGGATAATATTTCACACGCATAGCATTATGGGTTCCTTTAAGTGCCTTTCAATTCCCA TTGAATCAGTTTCCATTCATTGAACTAACATAACTTAACAACATGTCACATTGTCACATGAAGGCATAGATGCACATCTT TTTCTACAATCAATATCACCAAAAAAAGGCCAACCCTTTTGAAGAGTCTATTATCTGATTATGACCAAATGTATGAACGA TGCAACCAGCCAAATTGCATGTAGAATGCCCCATCATGGGGTATTGTGATTTATTTTGTTTGTTTCTAGATAAAGGACTT GTATTGATCAATATAACTGATATTTATAGGTATGTTACTCACTTTAGGAGACATGCAATAAACCAAAGTACGGTTAGATT AATAATAAGAGAAGAGTAATGATATGTGGACACTCCAACAGTACAAACACCCCTACAGACACCTCATTTTTCTCTATTTT CTTCCTTTTATATTCAGGGTGTCTGTTAGCTGTCTGGACTATGCAGATGTCCACGTACCATCATTGATAATGAGAATATT ACCTTTCTAAGGCTCAAACTTTGGCATGGCTATATAATCAGATTAGATTCATTTATATCAACAATAAGAAGAATTGAGCT CAAAGTTCAAACCCCCAAAGGAAAAAATTGTGTAGAATCAATCAACCTTCTACTTGTTCTACAGTAAAAAAATTGTTCTG TGTGTTTTACTAATAGTTTTTGGTAGTCATGTTGTTGACATTGAATTTACAGGACGAAATTTCAAGCCCTCTTAGTGCTC GAATTTTCGAACTATGTAACTCTGAATTGTTCCCAGAGGCTTTGCAGAATTCTGAGGTTACATCCAGCTCAAATTGCTGC TATGAAGAGAACTCCTCATATGCAACAAACACATCTTTAGCTATAGATGTAGAAACCAAGTTCAATAGCAATAACACAGT CACCACTCCAACTAGCACTACTACCACCGCCACCACCGCCGCCGCCAACACCACCAACAACAACAACAGTAGTAACCTCT CTGTGATCTTTGACTCCCAAGAAGATATTGACAATGATATATCTGCCTCCATAGATTTCACACTCTCTCCAGCCTTCAAT GTGGGACCATTTGCCCCATCCCAGCAAGAACAACACTTTGATTTCTCTTCTGTGCAGCAAAATCAGGTTCAACTCACAGC AAGTTCTGTTGTGGAGGGCTTCTCTCACTCTCAGTATCCACCTGACCCAGTTGCACCTCTCATGGGAGCATCATTGCCAC CTGTTTTTGAAGAGGATTGCATAACTTCTGTGCCTTCTTATATGCCTCTGAACCCTTCTTCTCCTTCTTGCGCTTATCTC GGTCCCGGCATGGCGGCGTATATGCCTCCTCCTGGTGCACTTAACACTGCTTTATCGGCTGAGAGTTGTGGATTGTATGG TGGGAACATTCTTCTGGGTCCTGAAATTCAGACACAGGAACTGGAATACCAGGGAGAAAATGGAAGACTTTATTGTACAG ATTCAATTCAGAGGGTGTTTAATCCTCCAGACCTTCAGGTATTGGCAATTTTCAAACTAACTAGTTAAGTTCTTCAATGT TGTTTTCTCTTAATAGTACAAACTCAATGAAAAATGTTTAGTTTGAATGTTCAATATACTCATCCATAGGTCCAATACCA TTAGAATTTTTCTTTTTAATGCTGCAAAACTTTAGGACAGGATACACAATGATCCTATAAGAGGAGATATTGGTGTGATA CCTATCAAGGTGAAAATGACGAAATTTCAGGTTAGGCGGTACAAACATGTACAAAGAAGACATTTGGAGGCACCAGTAAG AATTGTTGATAACATGGCTCTTAATCCTGTGAAAAACGGGTAGTCTTGTTAAAAGGGGTAGAGGGAAGCCAAAAAAGACA TTGAAGATATTGTCAAAAACCACCTCATGGTCAATAATATCTCACAAATTTTGGTTTTTGATTGAGCGCAATGGTGCCGG GTGATCCATATAGTTAACCTCAGTGGGATAAGACTTTTGTTGTTTTGTCGTTTTGTTGTTAGTTATGCTTTCTCTTTCAA GTCTGAAAGCTGGCAATAGTTAGGCTCCTATCAATTGAGAGTCTTTATCAGAGGTGAAAATATAAGAAAAGATCATGGGA CCACAAGTTTCTAGCAAGCTGGTGCCTCAAAGAATATATGTTCACATCCATCTAAAGAAATGCTATATCATATCAGTCCC TTTATAATCTCATTCTGACTTGCAAAATGTAGCATAGAATCTGGGCCAATAGCAGGAAGGAATCACAGCTTTCAACCCAA TTTGACAAGAAACAGCATTATCAATTTATCAATATTAGAAAAGTGTAGAAGACCCACTTCATTGGTGGTTTTTTTGTGTG TCACTTTCCAGAACTTCTAAGTAAAGTTGGTAATTTCTTTCTTAGGCACTTAGTACTGAGAGCCAGCAACTAGTAGCTGG GGCTGGGAGTTCTGCCACTCTGACACCAGAAATCTCAAACTTGGAGGATTCCACCTTCAAGGTTGGAAAACTTTCTGTTG AGCAAAGGAAGGAAAAGATTCATAGATACATGAAGAAAAGAAATGAGAGAAACTTCAGCAAGAAAATTAAGGTACTCAAA GCAGCTACATAATCAATCAAAACTGAAATCTTATGAACACTTTCATAGTACATATTCTCAAGTTCAACTAATGATGCAAC CAAACTTGCAGTATGCATGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAATGATGAC TTTGGAGATGCCAATAGAGCTGCTGGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAAGATTCCTAGGGAAATAAAC ATTTATCGCTTTAGTGTTAAATTCATAAGCAAATTTGAGAAATTGATTGAAATAAGCTGAAATAGGTTATGGATAAGCAT AAACCTTTATCCATAAGCTAATATGAACAGCTTATGAAAATAAACTCAAAACAGTTTATAGATATGTCATTAACTATTTA CATAAGTTCTTTCAAACACTTGTAAAAGCGTTTCAAATAAGTTTTTCAAAACCGAGCCTTATAGCTTTGGAATTATTTGT TGGTATTGTACTTTCAGGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGG GTGAACTCCTTCAAATGCAACTATTCCATCCAGTCATGGATTTGACTCAATAGTTTAGCTAGTATATACTACACCTACTA CATTTAGCTTCTGTAGATTTTTGCACGGCCCTGTTCCACTCCCAGAATTCTTAAACTTGGGTGTGATGAATGAGGAAACT GAATAAGAGGGGTCCTTATACTATACCAATAAGGGAATGAAGAACCTATAGAAAGTAAAGTGTATACATTTTTGCAGACA TTATCTTTCTCATTACTTGTACTTACTAAGAATCACATGTTGTATTTACCCATAAAATATTTCAGTTGCCTTATAGTGGT TGGAAACTAGCTCTTGTGGATATTTTTCCTTGGGGTGATTTACATTAAGGGCCTAAGGCCTAAGCCCAAGCTTTTAACTT CAAAAATGGAA
CDS sequence (LotjaGi5g1v0159700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCAGGATGTTTTTGATCAGCAACAACAACTGTCGCCAAAGGCGGCGGCCGAGGAGCAACACCAACTTCCCATTGA CGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTCGAACTATGTAACTCTGAATTGTTCCCAGAGGCTTTGCAGAATTCTG AGGTTACATCCAGCTCAAATTGCTGCTATGAAGAGAACTCCTCATATGCAACAAACACATCTTTAGCTATAGATGTAGAA ACCAAGTTCAATAGCAATAACACAGTCACCACTCCAACTAGCACTACTACCACCGCCACCACCGCCGCCGCCAACACCAC CAACAACAACAACAGTAGTAACCTCTCTGTGATCTTTGACTCCCAAGAAGATATTGACAATGATATATCTGCCTCCATAG ATTTCACACTCTCTCCAGCCTTCAATGTGGGACCATTTGCCCCATCCCAGCAAGAACAACACTTTGATTTCTCTTCTGTG CAGCAAAATCAGGTTCAACTCACAGCAAGTTCTGTTGTGGAGGGCTTCTCTCACTCTCAGTATCCACCTGACCCAGTTGC ACCTCTCATGGGAGCATCATTGCCACCTGTTTTTGAAGAGGATTGCATAACTTCTGTGCCTTCTTATATGCCTCTGAACC CTTCTTCTCCTTCTTGCGCTTATCTCGGTCCCGGCATGGCGGCGTATATGCCTCCTCCTGGTGCACTTAACACTGCTTTA TCGGCTGAGAGTTGTGGATTGTATGGTGGGAACATTCTTCTGGGTCCTGAAATTCAGACACAGGAACTGGAATACCAGGG AGAAAATGGAAGACTTTATTGTACAGATTCAATTCAGAGGGTGTTTAATCCTCCAGACCTTCAGGCACTTAGTACTGAGA GCCAGCAACTAGTAGCTGGGGCTGGGAGTTCTGCCACTCTGACACCAGAAATCTCAAACTTGGAGGATTCCACCTTCAAG GTTGGAAAACTTTCTGTTGAGCAAAGGAAGGAAAAGATTCATAGATACATGAAGAAAAGAAATGAGAGAAACTTCAGCAA GAAAATTAAGTATGCATGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACT TTGGAGATGCCAATAGAGCTGCTGGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAGTTGTGAAAGATGAAGATGAT ATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCATGGAT TTGA
Protein sequence (LotjaGi5g1v0159700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQDVFDQQQQLSPKAAAEEQHQLPIDEISSPLSARIFELCNSELFPEALQNSEVTSSSNCCYEENSSYATNTSLAIDVE TKFNSNNTVTTPTSTTTTATTAAANTTNNNNSSNLSVIFDSQEDIDNDISASIDFTLSPAFNVGPFAPSQQEQHFDFSSV QQNQVQLTASSVVEGFSHSQYPPDPVAPLMGASLPPVFEEDCITSVPSYMPLNPSSPSCAYLGPGMAAYMPPPGALNTAL SAESCGLYGGNILLGPEIQTQELEYQGENGRLYCTDSIQRVFNPPDLQALSTESQQLVAGAGSSATLTPEISNLEDSTFK VGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDANRAAGSNHEEDDEEEVVVKDEDD MVDSSDIFAHISGVNSFKCNYSIQSWI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| PANTHER | 78 | 427 | 350 | 1.0E-176 | – | |
| PANTHER | 78 | 427 | 350 | 1.0E-176 | – | |
| ProSiteProfiles | 329 | 371 | 43 | 15.725 | ||
| Pfam | 329 | 371 | 43 | 5.9E-19 | ||
| MobiDBLite | 368 | 393 | 26 | - | – | |
| MobiDBLite | 368 | 386 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0159700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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