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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0206800 |
| Transcript ID | LotjaGi5g1v0206800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myosin type-2 heavy chain 2; TAIR: AT3G04560.1 nucleolar/coiled-body phosphoprotein; Swiss-Prot: sp|Q9SYG2|ASIL1_ARATH Trihelix transcription factor ASIL1; TrEMBL-Plants: tr|A0A0L9THW3|A0A0L9THW3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0206800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50891025..50894905) extracted from Lotus japonicus Gifu genome v1.2.
ATAAGAGTGATATTGCAAAACTGCGTCGTTTAAACGGAAACGACAAAACCATCATGTCGTCAAGTGTTTGACTAGTCGAG GGGGGGTTCCACACTTCCACCTTCTTCTCTTCTTCCCCTGAATCGGTGAAGCATTGAATAATGGCAGACGATTTGTTTGA AGGATTGCCTCCTCCATCTTCCGCCACTCTCCTTCCTCAACCACCGCCATCTCCGCCAATTGTCTCGGTTCCCACCGCTG CAGTTCCCGCACCAAAGCCAATCCTCAAAAGTTCTCTCAAGCGCCCTAACCCTACTCCAACCGAAACCCAAGGTTACTTC TTCTTTTCCCTCCTCTTTTTTTCAATCAATCGAGCTTTGTTTTTCATCATGGCACCCTAGGGTTACGCATTCAAACGATT CTCCAAGTAGTTAGGTTTCCTGTTCGCTCTCTCGTACTCTTTTTTGCCATTTTATGTTTTGACTCTGAATAAATTAACAT TTGACATACCTAATGGTGAGATTAATGGGTAGAAAAATTCATGATCAAGATTCAAGCTTTTAGCACAATTTGACATGAAT TTCCAGTCACAGAATATGCATCATTTTAGAGTTTTTTTTTTTTTTTAGTAATTGTAGTCTACAGTATTTAGTGGGATAGT CCCGACTCCCGAGTGATAGCTCTAAGTGGTAAGAGCTGGGGGGACATATGGGTTGAGGAGGGGAAGGTGCAGGGGTCGAT CATTGGAGGGTGTAATTTATCTTTCCGATGTACTAAAAAAAAGTATTTAGTGGGATAAGGTTTGTTGTTGTTGTTGTTGT TGTTGATATCATTGTTTTAGTGAGAACTCAAGTTGTTTGTGGAAGGCATGTTAATTTAAGGATTCCTTACATTGTTTATC CCAATAGTACTCTATTTGAGCTGAGGTTGGTTTATGATGTTTCAATATGAATAGTGAGAGGATAAAAATTTGATTTGATT TTCTCCTGGTTTTGAGGAATGGTGGTATGTTGTGCAGTTATTGCTTTTATTTGATTCCGTCCCTGTTTTGAAGTTTTTAT TCTACTGAAATATGGACCTGCTTTGTCTGTTGCAATTTCAGATACAGCACCTAAAAAAAGCTTGAAGTTTAAACTCACGA CTGATGCTTCCGAAGCGCAAGTTATTGAGGCAATGCAGAAGATATCTTCACACATCAAGAACCCTGCAAAGTTCAGCAAG GCTGCCAAGCTTGCTATACAGCTGGTTCAAGCAGGAAGTGTTACGTCTAGCGTTAGTGATTATTTTTTTGCCATATTAGA AGCTGCAATGTCATCATCATCCCAACATTGTACTGATCCTTCAGTGCGGGCAGATTATCATGCTCTGTTCGAAGTAGCAC AAGACATCAAAGAAGTAAGATTAATATTTGTGCAAGATATTCATCGCCAGCAAAAAAATTCTTTTTTATTATACAGAGAG TATGTTGAAGATTTCTTGACCTATCCCTGTCCTTTAATTGCAGCACCTCGATAAGAAGCAAAAGAATCAACTGGCAACAT GGACAATTAATGCCGTGGTAGCAAATGATTTATATACAGATGACAGCTTTGTGGTATGGTTCTCAATTTTAACTAATCTT TTACGTTAAGCATGCTGACAACCAATATAGTAAATCTGTAATATTCTTCTTATTTGAGGCAATATTGGAAAGATGTCCAT CTGGTTTTGACATGTACTGTTGTTCCATACATCACAAAATGAATAGATGTACTCTCTTTTTCTTTGGATGTAATTCATAA TATTCATGCATGCACTGTTGTTATTGCTTTGATGTAGCTATATTTGAAGTTGTGTATCAATTAATTAGTTTCATAAGTAC ATAGACTGTGACCAAATATGGATCTAAATTAGTCTATTCCTTTTGAAGATTTAATTTTACCAGCAGAAGTTAAGATAAAT TGGAAAGGAAAAATCTTCTGGAGGATACTAAGATTATTGTCAACTCAAGTGAGTGAGTGGTTGATAAGCGTCATTGTTTC AATTATCGTCATGCACTTTGTTTGACCATGCCATGTGTTCTTTTACTGATGAATGGCGAATGGGGCATGGGAGTGCATCG GAGCATGACATGTGTGACGTCTTGAATCTTGACATCTAGAATGACGCTGGGGCCAAAACTTTTTTGATATGGAGTTGCAA CATTATTCATTTGATGGGTGAATTTTATAATTTAGACCTCACGTACTTGTGGAAAGCTTATTAATACGTCAAATTAATTG TTGTTTAAAATTTGTCTGGGTGTTTTCATGTCTACTGTGTGTTTTTGAGTTGCTTAGCCTGTGTAGATTTGGGATGTTGT TGCCTATCTTAATCTTACTATATGTACCTCGAATATTTGGGCTCATAAAAATTATCCATATGTTGCTCATGCTTTATCTC CTAATGTTTATACAGTTTTCTAGAGCAGCTGGAAAAATCAAGGAAGCTATATCTAACCTTCCTGTAGCAACAGAGGAGGA AGACAAAGATGAAGCAACGTCTCTGAAAGATAGCACAGTTTTGGTAGGTGAAGGTGGTGAAACAGTTGCCGCAAACGAGC ATATTACTGACGCGGAGGAAGCTGACCCATTTGGACTTGATGCTCTGATTCCTGGATCCACAAAGAAAGGTGAAAAATTA AAGGCAAAGAATGGTGAAGCTGTGAAGATAAGGAGGGAAGATGAGGAAGAAACTAAGCGATTCATCAAGTCACAAAGAGA AGCCCTGATAACTTGTTTAGAGATTGCCGCTCGGCGTTACAAAACACCTTGGTAAGTGCTGGTCCTGTTTTCTGTTGTAT TTGTGTTTTCCTTATGTTTTGTCATTTTGACATCATTTATCCTTGTTTGAATTTTCTCTAATTCAGGTGTCAAACCGTGA TTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGCAAGATTTACAGCTCATCAGAGGGATGCTGTAGGGAAATTGTGG GCTTCCATTAGAGAGCAACAAACACGTCGGAAGCAAGGGAAGTCAGTTAATGGAAAACTTGATGTAAATGCCTTTGAATA TCTTCAAGAAAAATATGCTAATGAGAAGATTAGCATTCGACATTCTGTGGGAGGTAGCGGGGACCGAAAAGCCACACAAT GGCTTGGTTAAATATTCTTGTGAGCTTCCTGAGGCTTCGTTTGGATTGGGGGAAGGGGATGGAGTGGAGCGGAAGGGAGA GAGGGGTTTGAAAGATCCATTGTTTGTGTAATTAAAAAAAGGATGGAATCAGATGGAAACCAATGGTATCAATTCCATTA TGTTCCATTACTTTCCCCCACTTCCTGCTAAGTTTTTTTTGGCCTTTTTTTTGTTATTTAGTTGTTCGCTCTCATTATCT GTCTTGCTCTTCTATTTTTTTTTTTTTACATTAATTCATCTAAATCTTGTTTATTAATATTGGAGTATAAACAACCATAA GAAATGAACACCTAATGGTAAAATTGGGATGTTCTAAGTAAGAAAATAAGGGTGTCACTATTTCTACTCGGAAAAAAGAA AAGATGAGTGAAGATATTTTTTTTGAAATAGAGCAATTAATAGTTAATAGTTTTATAGTAAGGGTAATATAGGAATATTA TAATAATAACTTGTACCACTCAGTCCATAACCCAAACAATAGAGTGGTAATTTTCCTCCGCTCCGTCATAAAATACCCAA ACAATGGAATAATAAATTCACTCCGTTCCATTCCACTCCATTCCGTTCCTTCGTGTTCCATTCCGCTCCGTTCCATTGTG TTCCATCAATCCAAACATACCCTGAGGGGAGAATGATGGCAAATGTCAACTTTAAAATGGCAAAAAATAGGGGAAAGATG ATGTGTTCTCATCACTTCATTGAGTGTGTTGTAACTTGATA
CDS sequence (LotjaGi5g1v0206800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGACGATTTGTTTGAAGGATTGCCTCCTCCATCTTCCGCCACTCTCCTTCCTCAACCACCGCCATCTCCGCCAAT TGTCTCGGTTCCCACCGCTGCAGTTCCCGCACCAAAGCCAATCCTCAAAAGTTCTCTCAAGCGCCCTAACCCTACTCCAA CCGAAACCCAAGATACAGCACCTAAAAAAAGCTTGAAGTTTAAACTCACGACTGATGCTTCCGAAGCGCAAGTTATTGAG GCAATGCAGAAGATATCTTCACACATCAAGAACCCTGCAAAGTTCAGCAAGGCTGCCAAGCTTGCTATACAGCTGGTTCA AGCAGGAAGTGTTACGTCTAGCGTTAGTGATTATTTTTTTGCCATATTAGAAGCTGCAATGTCATCATCATCCCAACATT GTACTGATCCTTCAGTGCGGGCAGATTATCATGCTCTGTTCGAAGTAGCACAAGACATCAAAGAACACCTCGATAAGAAG CAAAAGAATCAACTGGCAACATGGACAATTAATGCCGTGGTAGCAAATGATTTATATACAGATGACAGCTTTGTGTTTTC TAGAGCAGCTGGAAAAATCAAGGAAGCTATATCTAACCTTCCTGTAGCAACAGAGGAGGAAGACAAAGATGAAGCAACGT CTCTGAAAGATAGCACAGTTTTGGTAGGTGAAGGTGGTGAAACAGTTGCCGCAAACGAGCATATTACTGACGCGGAGGAA GCTGACCCATTTGGACTTGATGCTCTGATTCCTGGATCCACAAAGAAAGGTGAAAAATTAAAGGCAAAGAATGGTGAAGC TGTGAAGATAAGGAGGGAAGATGAGGAAGAAACTAAGCGATTCATCAAGTCACAAAGAGAAGCCCTGATAACTTGTTTAG AGATTGCCGCTCGGCGTTACAAAACACCTTGGTGTCAAACCGTGATTGATATTTTAGTGAAGCATGCCTTTGATAATGTG GCAAGATTTACAGCTCATCAGAGGGATGCTGTAGGGAAATTGTGGGCTTCCATTAGAGAGCAACAAACACGTCGGAAGCA AGGGAAGTCAGTTAATGGAAAACTTGATGTAAATGCCTTTGAATATCTTCAAGAAAAATATGCTAATGAGAAGATTAGCA TTCGACATTCTGTGGGAGGTAGCGGGGACCGAAAAGCCACACAATGGCTTGGTTAA
Protein sequence (LotjaGi5g1v0206800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADDLFEGLPPPSSATLLPQPPPSPPIVSVPTAAVPAPKPILKSSLKRPNPTPTETQDTAPKKSLKFKLTTDASEAQVIE AMQKISSHIKNPAKFSKAAKLAIQLVQAGSVTSSVSDYFFAILEAAMSSSSQHCTDPSVRADYHALFEVAQDIKEHLDKK QKNQLATWTINAVVANDLYTDDSFVFSRAAGKIKEAISNLPVATEEEDKDEATSLKDSTVLVGEGGETVAANEHITDAEE ADPFGLDALIPGSTKKGEKLKAKNGEAVKIRREDEEETKRFIKSQREALITCLEIAARRYKTPWCQTVIDILVKHAFDNV ARFTAHQRDAVGKLWASIREQQTRRKQGKSVNGKLDVNAFEYLQEKYANEKISIRHSVGGSGDRKATQWLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 63 | 63 | - | – | |
| PANTHER | 1 | 391 | 391 | 2.3E-177 | – | |
| MobiDBLite | 14 | 33 | 20 | - | – | |
| MobiDBLite | 47 | 63 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0206800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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