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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0212900 |
| Transcript ID | LotjaGi5g1v0212900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic-leucine zipper (BZIP) transcription factor family; TAIR: AT5G28770.4 bZIP transcription factor family protein; Swiss-Prot: sp|Q99090|CPRF2_PETCR Light-inducible protein CPRF2; TrEMBL-Plants: tr|I1NIQ2|I1NIQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0212900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51807868..51812943) extracted from Lotus japonicus Gifu genome v1.2.
CACACAGAATCCAAAGAGGAACGAACCAACGTACGGTAATGGATAGGGTGTTCTCAGTCGATGAAATCCCCGATCACTTT TGGTCGCCGCCGATTCCCGCCACCGGCGTCGACGGCGGCTCCTCCAACATGAGCCGAAGCCATTCCGAGTGGGCCTTCCA GCGCTTCCTCCAGGAAGCTTCCGCCGCCTCTCCACCTTCTGCATCATCCGCTGCTGACGATGTCGCTTTCGTCGAGATCC AGGGTCAGCACAAATCCAGCACCGGCGTCGCCGCCGCGCCCACTCCGGTGAACGGTGGTGTTTTGTCCGATGGGCCTCCT AACGCGCCCGTTGATTCCGATGAGTACCGGGCCTACCTCAAGAACAAGCTCAATGAAGCTTGTGCTGCTGTCGCCATGAC TAGGGTATTTCTGCCTTTTCTCTTTTTGTGTTGTGCAATGTGATTTGATTCAATTTTGTTTGGATTTCGATTTTGGATCT GTTTTGCTTTGTGATTCTTACTGTTTGATTCGTCTTTTAGGTTTATGGGTATTGTTCAATCATTGGCTATCATTCCTCAC TTAGAGGAGCTCAATCCATATCATATTGATACACAGCTATTGCATGGTTCTGAGTGATATTAATATGTTATCTGTTTAGT TTCTTAGGCCTAACCAGTTTTAACCTGTAAAATTCAGTAGAAAGTAGACTGTGCATTCTTTCAACTAATAGATATTCAGA AATTAGGAAGAAGCATCCGAATAAAAGGCAGTGTTATCATGGCGCCGACATGCCAGTTTTTCATGGCAGTTTTTTCGTTA TTTGGCTTCCCGCGCCATGGCTGTTATCCCGCCATATGGCCGCAATATTCTGCCATATCCCGCCATTATTTGTCATGTAT GGCGGGATTTTGGCTTTCCGCCATGATCTGCCAGGTCTTCAATGGCTTCCTTGGAAGGCTTTTTTATTTTAAATATGTAT CTTGTGACATTGTATATCCTGCAATTTTGAAATTATAGGGTTTTTGTCTTTTTTTGGTACTGAGGGAGAAAAGGAGTAGA AACTAAATACTCTAAAACTGATATTTACTTGATGCGGAATGGTGTACTAGATGTGTTACAACTTGCAAACGAAACCCTAT TTATACCATTACCAATGCTAGACTCCTAATACTGATTAAATAAAGGAAACAAATCATGAAATATTATCAAAATCAGTGTT GTTAATCACGGATCACGGATCGCGGACTATAGCGGTAAGCCATAAATCCGCTATTTCCCGCCTCTTAAAGCGGAAAAAGC GGCAAATAGCGGAGTAGCGGTAAGCCAAAAAAAGCGCTACGCTATTGTGCCGCTGCTATTTGACAACACTGATCAAAATA TATCATGAAATATTTTTCATTTAACACTTACCACTTTGCTTTCGTTTCTGGTTGTCTGGCTTTCAATCCTACTGTTTAAA ATTGCATTACTTATTTAATTATGTATGATTTATAACTTTTATTGGTCTAGACATTGGGACCATTCCCATATTTTTCTCAT CTTTTCACACTGAGGATTGGCTGATTGGGCTAGCTTCTAACTTCTTTTTCCTACTAATTGCAATAGGGATCTTTGGTTAA ATCTCAGGATCCAGCCACTTTTCCTGACGGTGGATCACAGCCTTCTAATCCTTCTCAACTTGGATCTCAGCCTACTTTTA AAGGTTTGAATTGGTAAATGTTTATGCGCGCGTGAGTACACACACACACACATATATATGAAATGAGTTTAATGACACTA TAGGCCCCATAGCTAAAGTAGAGTAGGCTATAGGCTGAACGCTGAACGCTGAAAGCTTGATTTAATATAAATTAGTAACT ATCAATAGTTGCACGAGTAGGGTGAACACATAATGTATGTTTGCGATTTCGTTTTAGTCAGAAAGCTAAGCTTTCTTTCA CTGGTCTGTTTAGTCATATCTTGAGCAGCTTTAGGGTTTAATTTTTATCTCTTTTTCTCTTACACCTATTGCATTATATA AAGTATATCTCTCTATATAGGATCTGGCCCTTCTGGAAATGATCCTTCTAAATTACAAGATAAGGAAACCAAAGTACCAA TTGTGATTCCTTTCGTGCCTACCGTGCAAAAGAAACCTATTTTTGTTATCAGGCCATCAACTAGTGGGTCATCAAGAGAA CAGTCTGATGATGATGAAGCTGATGGAGAGACAGATATCAATACTGACAACATGGACCCTTCTGATGCAAAACGAGTAAG GAGGTAAGAATTGTCTCAAAATTGACTGTTTGACAAACCTGTATCATTTAACTAGCTCAAAAGTTATTTCGAAGTTTGTT TTACTCAATAGGATTTCCTGGCTTCTGCTAAATAAACTGAGTGATTGGCAGAAAATTTGTATCAAGTGTCATATTAGATC TTTGAAGCAAGAGTAATGTTGCACGGAAAACCTGAGATTTGCCTGCACCAGGAACCCAAGACACACTTCTCTTAGCTCAA GTACTTAGCTTGGAGGTCATGGGTTCGAGAAGTGTGGTAGGGAAATGACCCACTTCCAGGGGCAATTTCCATAATGCGGG GCAAACCTGGGCCTGAAGGACTAAGGAGAAGGGCCCTTTGTAAGCAAATCCTGGGTGTTACAATGCATACCATAGTTATC GATCGCGACAAATAGCGGCGCTATTGCGCCGTCTCGTCGGTTCCCTGCGATTCTGGATCGATCGCATTGCGGAACACCGT CACGGCTGTCGCGCCGCGAATCGTTGCCTAATCGTGGCAAATCGCGTGCTATTGAATCTGCAGGGGAAATGACCCAATTC CCCTTAATTTTAAACCGTTGGAGCTTCAAGTCGGGGGCAAAACAGTAAAGTCGAAGGAAAATTAGGTCAAATGATTCTCA ATGAATCATTCATTCATTCACTTTCACTCAGCCGCTTCTCTCTTCCTTCTCTCTTCGTTCATTCATTCACTAACCAAGCT CTGCAAGAAGCTCTCCGGCGCCGGCAACAAGCTTCTTCTCCGGCGAGAAGCTTCATCAGATAATTTCTTATGTAACTAGG AGCCTAGTAACTCTTTTTTCAAATTTCAATGTTGTTGTTCATGTTTTAAACCTTAGGGGCATTTTAGTGGTTTTTAGTTG TGTGTTATTATTTTAAGACTTGTGACTACTATTGCTATTATGAATGTTAAGTAATATTTGTCATTTTTAGGCATTTATAA TTTTATATGTATACTGTATTAAACTATTATTCATATTTAAAAAATCAGAATAGCGGCCATCCCGCTATCCCAATTTCGGG GCCGGCCGCTATGGGCCGCGATCCGGGATTGACTACTATGATGCATACTCTGTTTTTTTCTCACAAATTGTGCAGAAACT TTTAATTTGATTGCATCTAGGTTCACCTAAAAATTTGCAACTAGTTTCACTTTGAGCTCCTGCTAGAAAATTTTCCTGTC AAACTTGAATACACATGTCAAAACCATTTTGAATAAAGGTTATAGTAGTTTGGTTATAGTCTTATGCATCTCCTGATTTT ATACAGTATGCTAATATTTTTTTTATAGAATGCACGCGTAACTAATCTGTTTTGTTTTTTCTTCTTCCAAAATGGGATTC CTTTCTAACCCTGTGTAATTATAGAACGCTCATTTGTTCAACTTGGGGATAATATCTGCTTCAGTTAATTCAAAGCCTAA TGACATTTATTTCTCAGGATGCTTTCCAATAGGGAGTCAGCCAGACGTTCAAGAAGAAGAAAACAGGCTCATTTAACTGA TCTGGAAACACAGGTATGCATATTTTATTTTCGTCCTTAACTGTTCCTTCTCCTTTCTTTTTCTCCGTGTTAGTTGTTCA CTCCTCCCGCAGAAAATTTAGTTTTTTCTGACCTTATATTCTATCTTAGGTTTCTCAATTAAAAGGTGAAAATTCTTCCT TGTTAAAGCGCTTTTCTGATGTAAGCCAGAAATTCAATGATTCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAA ACCTTAAGAGCAAAGGTAAAGCCCTGTTTTATGTGTTTTACTTGGCTTAATTGAAATCTATTACGGCAAACCTACCAGAA CTTTCTGATAAGCTTACTAGGTTTAGCTGAAAAACTGAGGAATGGAGCCCCATCAGGATCATATTTTTTCACAGTAAAGA GAAACAAAATTAAAAGGAAAGTAATAATATTGCTTGGTCAGTATTCTATTCTCATTCCCTTCCATGTTATTCTCGTTTTT AGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACAGGGTTGAACCCAATGTTTCATGCCATGTCTGAGATATCATCA ATGGGCATGCCACCATTTGCTGGAAGCCCTTCAGACAATTCAGTTGATGCAGCTGTTCCTGTGCAAGATAACTCACATCA TCAACAATTCTATCGGCCTGTGTCTAATAATCCTATGCCCAGACATGATCTGAGAGTCAACAATGGTTTGGGGGACATTT CTTCAATTGAAAATGTGCAGCAGCAGAATGGTGCAGCAGTGGCAGGTGGGAACAAGATGGGTCAAGCAGCTGCTCCCCTG CAGAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCATGTGGAGCTCCTTCTAATGGAGA GCAGTAATAGTAGTAGCCAAAGGCAAATCTTATGGATGCTCTATTCAAGAAATTATTCTAAAAATACTTATTTCAGTTAG TTATCAGTAAAGGCCTATTCTTCTTGACAACATTGTAAATTAATTTGGGGACGTGACACTATTCAATCAGTGCACCATGA CCCTATATCTTTTTTTGGATAAAATATACTTTTATCTCCTAGTTCGACAATTTCTTATCCTGTTCTTCCCCCCATTAAAC CACCCTTATGTTTGGATTTGGTAATTCATGGTCTTTTTTTTTAAAAACCACCTATTATTTTCAGATTAGGCTCATTTGAG CAGCCCTGGAGATCAAATTTCTGTTTGGTTCTGAGAGAATAGACAGGGTTATCGATTTTCTCAGGATTTGTTTACTTGAT ATCTTGATGTTTACTTGGTTGTGGGAGAATAGAGGG
CDS sequence (LotjaGi5g1v0212900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAGGGTGTTCTCAGTCGATGAAATCCCCGATCACTTTTGGTCGCCGCCGATTCCCGCCACCGGCGTCGACGGCGG CTCCTCCAACATGAGCCGAAGCCATTCCGAGTGGGCCTTCCAGCGCTTCCTCCAGGAAGCTTCCGCCGCCTCTCCACCTT CTGCATCATCCGCTGCTGACGATGTCGCTTTCGTCGAGATCCAGGGTCAGCACAAATCCAGCACCGGCGTCGCCGCCGCG CCCACTCCGGTGAACGGTGGTGTTTTGTCCGATGGGCCTCCTAACGCGCCCGTTGATTCCGATGAGTACCGGGCCTACCT CAAGAACAAGCTCAATGAAGCTTGTGCTGCTGTCGCCATGACTAGGGGATCTTTGGTTAAATCTCAGGATCCAGCCACTT TTCCTGACGGTGGATCACAGCCTTCTAATCCTTCTCAACTTGGATCTCAGCCTACTTTTAAAGGATCTGGCCCTTCTGGA AATGATCCTTCTAAATTACAAGATAAGGAAACCAAAGTACCAATTGTGATTCCTTTCGTGCCTACCGTGCAAAAGAAACC TATTTTTGTTATCAGGCCATCAACTAGTGGGTCATCAAGAGAACAGTCTGATGATGATGAAGCTGATGGAGAGACAGATA TCAATACTGACAACATGGACCCTTCTGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCCAGACGTTCA AGAAGAAGAAAACAGGCTCATTTAACTGATCTGGAAACACAGGTATGCATATTTTATTTTCGTCCTTAA
Protein sequence (LotjaGi5g1v0212900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRVFSVDEIPDHFWSPPIPATGVDGGSSNMSRSHSEWAFQRFLQEASAASPPSASSAADDVAFVEIQGQHKSSTGVAAA PTPVNGGVLSDGPPNAPVDSDEYRAYLKNKLNEACAAVAMTRGSLVKSQDPATFPDGGSQPSNPSQLGSQPTFKGSGPSG NDPSKLQDKETKVPIVIPFVPTVQKKPIFVIRPSTSGSSREQSDDDEADGETDINTDNMDPSDAKRVRRMLSNRESARRS RRRKQAHLTDLETQVCIFYFRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 255 | 255 | 1.0E-82 | – | |
| PANTHER | 1 | 255 | 255 | 1.0E-82 | – | |
| MobiDBLite | 70 | 97 | 28 | - | – | |
| MobiDBLite | 127 | 167 | 41 | - | – | |
| MobiDBLite | 133 | 164 | 32 | - | – | |
| MobiDBLite | 190 | 246 | 57 | - | – | |
| MobiDBLite | 218 | 234 | 17 | - | – | |
| ProSiteProfiles | 223 | 255 | 33 | 8.967 | ||
| Pfam | 224 | 255 | 32 | 6.9E-10 | ||
| Gene3D | 225 | 257 | 33 | 1.3E-10 | – | |
| SUPERFAMILY | 225 | 256 | 32 | 1.22E-8 | – | |
| ProSitePatterns | 228 | 243 | 16 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi5g1v0212900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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