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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0224100 |
| Transcript ID | LotjaGi5g1v0224100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Respiratory burst oxidase-like protein; TAIR: AT1G09090.2 respiratory burst oxidase-like protein; Swiss-Prot: sp|Q948T9|RBOHB_SOLTU Respiratory burst oxidase homolog protein B; TrEMBL-Plants: tr|G7I8P3|G7I8P3_MEDTR Respiratory burst oxidase-like protein; Found in the gene: LotjaGi5g1v0224100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53052228..53053845) extracted from Lotus japonicus Gifu genome v1.2.
GGCATAGACATGGATGTATCTCGCCGTTCCTATGATACTGTATGGAGGTGAAAGGCTGATTCGTGCTTTTAGGTCGGGCT ACAAGTCTGTGAGGATTCAAAAGGTACACATTTTCAAAATTAAAATTTTGACTCCTCTGTTTTTAGTTAATCGTGTCATT AATGATGTTATGAATGAAATTTTGACGTTGTTCTTTGGAAAATGCAGGTTGCAGTGTACCCAGGAAATGTACTAGCATTG CAAGTATCTAAACCACAAGGATTTAAGTACACAAGTGGCCAGTATATTTTTGTTAACTGTTCTGATATCTCCCCATTTGA ATGGTTTGCAACTAATTTAAGCTCAAAATTCCTATTCTTATTGTTATGATTTCCATTATTCATATAGAAAGGGTGACCAA TAGAAAAGTGAAATTAATTGTGCTATACATGTATCTGTCACTAGGCATCCCTTTTCTATCACATCAGCTCCGGGAGATGA CTACATAAGCGTTCATATTCGAACCTTAGGCGACTGGACATCACAACTTAAGGCTATTTTCGCCAAAGTAAGTTTTGCAC AAGAGAAGAAAATTTTGTTAATTTTTATAGATTCTTGTGATGTTACAGGTTGTACATTTTATAAATGTTCATGGCATATA TAAATGCTTATTGTTGGATCATTGCCATTGATACAGGCATGTCAACCATCAACTGACGACCAAAGTGGTCTTCTGCGAGC TGATATGTTACCAGGAAGTAGCAAACCACCAAGGTATGCTAAGTTATCTTTAATGTTGTTTGTGTTGGAATGCAAGTGTA AGAATGATGTCCTACATTAGTTAAGAAGTTGAAGATGAGATGTGACCCACACATACCCAATGCCTTAAAGTTTTGGAAAA ATATGTTGTGTCGGATTCTCTTGGTGCTCTTATTTGTTGGTCCATTGGTGCATGATCTTTTGCTTTTAGCTCTCAGTGTT ACTCCTAGAGTTATAAGGGTATAATTAAAAATAAATAAGTGATCATGAACCATAGCACAAAATACTATCATTGAATTGCC AGATACCTTCATTATAATCCTAGTAATACTCAAACAAATTTCAGGATGCCAAGGCTCCGGATTGATGGACCATATGGAGC TCCAGCACAAGACTACAAAAACTATGAAGTCCTCCTTCTTGTAGGGCTTGGAATTGGCGCCACCCCTTTGATTAGCATAC TTAAAGACGTGCTAAATAACATCAAGAACCAACAAGACTTGGAAGAAGGAGAGGTAGAAAGCGGAATCAAGAATAGCAAG AAAAAATCACCTTTTGCCACGAAGCGAGCCTATTTCTATTGGGTTACTCGCGAGCAAGGTTCCTTTGAATGGTTTAAAGG GGTGATGAATGAGGTAGCGGAGAACGACAAGGAAGGGGTAATTGAGCTGCACAACTATTGCACAAGCGTGTATGAAGAAG GAGATGCTCGCTCAGCTTTGATCACAATGCTTCAGTCTCTCCAACATGCCAAAAGTGGTGTGGATGTAGTTTCTGAGACA AGGGTCAAGACACATTTTGCTAGACCAAATTGGCGTAATGTCTTTAAACATGCAGCTCTCAAACACCCTGACAAAAGAGT TGGTAAGTATTGATTTAA
CDS sequence (LotjaGi5g1v0224100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATCTCGCCGTTCCTATGATACTGTATGGAGGTGAAAGGCTGATTCGTGCTTTTAGGTCGGGCTACAAGTCTGTGAG GATTCAAAAGGTTGCAGTGTACCCAGGAAATGTACTAGCATTGCAAGTATCTAAACCACAAGGATTTAAGTACACAAGTG GCCAGTATATTTTTGTTAACTGTTCTGATATCTCCCCATTTGAATGGCATCCCTTTTCTATCACATCAGCTCCGGGAGAT GACTACATAAGCGTTCATATTCGAACCTTAGGCGACTGGACATCACAACTTAAGGCTATTTTCGCCAAAGCATGTCAACC ATCAACTGACGACCAAAGTGGTCTTCTGATGCCAAGGCTCCGGATTGATGGACCATATGGAGCTCCAGCACAAGACTACA AAAACTATGAAGTCCTCCTTCTTGTAGGGCTTGGAATTGGCGCCACCCCTTTGATTAGCATACTTAAAGACGTGCTAAAT AACATCAAGAACCAACAAGACTTGGAAGAAGGAGAGGTAGAAAGCGGAATCAAGAATAGCAAGAAAAAATCACCTTTTGC CACGAAGCGAGCCTATTTCTATTGGGTTACTCGCGAGCAAGGTTCCTTTGAATGGTTTAAAGGGGTGATGAATGAGGTAG CGGAGAACGACAAGGAAGGGGTAATTGAGCTGCACAACTATTGCACAAGCGTGTATGAAGAAGGAGATGCTCGCTCAGCT TTGATCACAATGCTTCAGTCTCTCCAACATGCCAAAAGTGGTGTGGATGTAGTTTCTGAGACAAGGGTCAAGACACATTT TGCTAGACCAAATTGGCGTAATGTCTTTAAACATGCAGCTCTCAAACACCCTGACAAAAGAGTTGGTAAGTATTGA
Protein sequence (LotjaGi5g1v0224100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLAVPMILYGGERLIRAFRSGYKSVRIQKVAVYPGNVLALQVSKPQGFKYTSGQYIFVNCSDISPFEWHPFSITSAPGD DYISVHIRTLGDWTSQLKAIFAKACQPSTDDQSGLLMPRLRIDGPYGAPAQDYKNYEVLLLVGLGIGATPLISILKDVLN NIKNQQDLEEGEVESGIKNSKKKSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSA LITMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDKRVGKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 290 | 290 | 4.8E-173 | – | |
| PANTHER | 1 | 290 | 290 | 4.8E-173 | – | |
| Gene3D | 13 | 103 | 91 | 9.3E-16 | – | |
| ProSiteProfiles | 21 | 132 | 112 | 14.674 | ||
| Pfam | 25 | 129 | 105 | 2.7E-32 | ||
| SUPERFAMILY | 25 | 129 | 105 | 2.6E-18 | ||
| CDD | 30 | 237 | 208 | 1.03598E-49 | – | |
| PRINTS | 118 | 131 | 14 | 4.5E-9 | ||
| SUPERFAMILY | 119 | 215 | 97 | 8.64E-8 | ||
| Gene3D | 120 | 291 | 172 | 5.1E-39 | ||
| Pfam | 136 | 289 | 154 | 3.9E-45 | ||
| PRINTS | 141 | 158 | 18 | 4.5E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0224100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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