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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0230500 |
| Transcript ID | LotjaGi5g1v0230500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein EFR3; TAIR: AT5G26850.1 Uncharacterized protein; Swiss-Prot: sp|Q14156|EFR3A_HUMAN Protein EFR3 homolog A; TrEMBL-Plants: tr|K7N2K6|K7N2K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0230500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53788269..53795586) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGATCATCTCCCGGAAGATCTTCCCTGCATGTGGGAACATGTGTGTTTGCTGTCCTGCTTTGAGGTCAAGCTCACG CCAGCCAGTCAAACGTTACAAGAAATTGCTTGCTGACATCTTCCCCAAATCCCCGGTTAGTATCTTATCACACTCCTTTT TACCATGAAAATGGACATTGTAACATTATGCAACTCCTATGTATACTGCCATTGTGGCTGGTTTAGCTCTTTTTTTCTTT CAACACTTTGATGCCTTAGGAAACAATTTTTTTTGGTGAATTTGTTGTTAAGCCTTTACATTCCCATGACGAGGAGAACA TTAATTTTCCTTCTCTGTGAAGTTGAAAATTTGAAACTCATTGTTACTTCTGTGCATTGTTATGGCTTTATTATTATGAA TTATTGTTTTCAGTTATCACTTGCTTTTGAAGTGGAAAAAAAGTTACAATTCTAACCAACCAATCATGGTTGCTGGTGAA TCAGTTTACTTGTATTATCTTGTCATATCTTTTCACTTTACCATTCATTCGTGGATGAAATAGAACTTTGGTATTCATGT TTTAAATTATACTTCTCAGGATGAGCTTCCCAGTGAAAGGAAGATTGTAAAATTATGTGAATATGCAGCAAAAAATCCTT TCCGGATTCCAAAGGTATTTTTATTCTTTTATTTCACTCATGTATTGGTTTTTAAACAAACGAGGAAGAGGAAAATGGAT GTCCTTGAATTAGCTGAATCTATTGCTGAGGTTATGTTTTTCTCTCTCTGTTAGATTGCAAAATATCTTGAAGAAAGGTG CTACAAAGAACTCAGATCTGGGCACATAAAACTGGTGACGATTATCACGGAATCGTTTAACAAGTTGCTTTCCATTTGTA AGGTGCAGATGTAAGTTTCTCATGATTAATTAGTTTGTTTCCATACTCAGTAGTGTGCTGGTATCAAACACTTGATGTTT TATGGATCCTTTTCATTGTTCCACTTATGATATTGATCTCCAGCATACTATATTTATGTGGTTCATTTTGAAAGTTTTTC ATATATCTCTTGCTTGTTGCAGAGCATATTTTGCTCTTGATGTGCTTAACGTAATTACGGAGCTCTTGGGCTATTCTAAG GATGAAACAATTCAGACACTCGGTTGCCAATCCTTAACAAGGTTCATCTTCTGTCAGGTGAATCATACAATTCTAAATGG CCAAGATACTTCTGCGCTGTTTGCTTACGTAGCTTTTGCATGACTGTAATTCTATAAGATTAATATTTACTTGAATTTAT GAACTTGGAAACAGGAATGAATTGACTCACTCTCTTTGTATGCAACCTCAATAGCGTATGAGTATATTAGTATAAGCTAA AGCAGGTTTTGTGATAATTATAGGCCTCCCTTAGGTGTTACAATCATGAGTTGATCTGTTTCGCCTGCTACTTTCTGCCA TCCAATAAATTAGCTGATGTCATTTTTCGCCCTGCACTTTCATGCTATTGACACAATGAAAGAACAGGTAGATACTACTT ATACTCATAACATTGAGAAATTGGTGAGGAAAGTATGCATCCTATCGCGGGAGCATGGGGAAACACATGAAAAGCGCTGC TTAAGGGCGTCAAGCTTGCAATGCCTTTCAGCAATGGTAATTAGTGCTCTGTTTGATTTGCTTTGTGCTTCAGATGTTGT ACATGTCAGTTGTTTGAAGTCTGATTTATAATATTTTCGTGTAAGATTTCATGGTCGTGATGAGCTTTTTATTGTTTTTT CGAACACATATGATAATAGGAGTAAGTACATTGTTTATTTGACTGCTTTTTTCATGGCAGGTTTGGTTCATGGCTGAATT TTCGAACATTTTTGCTGATTTTGATGAGGTAAGTTATCGTGCTTCTCCCCTCCAACTCCATCCTATCCTTTTAATGAAAT GAAGCTTATTTACATCTCAGTTGTAAAGAGATGGAAGAGATCTCAAAGACCTTAGATTATCATTGTTGGACTTGGTATCT CCCATACTGGGGTGAAATTGTGATGAAATAAATTTTTTTGATGGAAAAGATCTCACAGACTTCAAATGATTCCAAGGTTT GATGACACTTTAATTTCATGTCTAGTAAACTGTTTTTTGAAGGTTTGAACTTTACATTAATTAGGAAATTAATTAGGAAA TCTGGAACCAAACCCGCCAATTTTGTAACTACCATTATACTGTGGTTTTCTTTGATCAATAGTTTTTTTTAACTTTACGT GGTGGATTCCTTTTGTTTATTTTCAGTCAGGTATCATCTATAATTTGTTGGTTCATTCAAAATGCAGATTGTGTGTGCCA CTTTAGATAACTATGAGTGGATTAGGCAAAGTCAAGATGCCGATGTCAGGACAGAGGCGCATCATAATTGGGTGGATGAG GTTGTACGGTGTGAAGGTCGGGGTGGTTCAGTTGTTGGTAATGACATTCGCTCTAGCTGCTTGATCATCCAGCCACGGCC AGAAATAAAGGATCCTTCCCTTTTAACTAGGTACTTGTTATCCAAGAGCTACGTATTGCGTCGCCGTCATTTATTAGCTG TTGCAGCTCTGGCAGTTGGTTTTTTACACAGCTCTTAATCATTGTTCCCTTTTTTTGTTTGTATTTATCTTTATTACAGA GAAGAAATTGAAAAACCTGAAGTATGGGCTCAGATATGCATTCAAAGAATGGTAGAATTAGCCAAGGAAAGCACAACTAT TCGTCGTGTACTGGATCCAATGTTCGTCTACTTTGATTCAAGGCAGCATTGGGCTACTCAGAATGGGTTAGCAATAATGG TTTTATCCAACATGGCTTACTTCATGGAGAACACGGGTACATTATCTCTTACCAACTTCTGGCTCAATTGCTTTTCAGAA ACAAATCATTCAATTGATGTGTCATTGTATTCCATATTTTTACCTTTAAAGCTGTGTGGAGTTTAGGTTCTGATAGAATA GAATATTCTTGAAAACAGTTATGAATGCTCTATGAGGTTCTTCTGTCAAACCATCCATTTTTGCCCCATAACGTGTGTTT TTCCATTTTTCTACAGGGAATCAACGCTTAATTCTAGCTTCTGTGATACATCATCTTGACCACAAAAATGTTATGAATGA TCCCCAACTTAAGTCCTATGTAGTTCAAGTTGCCACATCTTTAGCTATGCAAATTAAATCAAGGAGAGGATTGGCGGAGA TTGGTTTTGTTGGCGACCTTTGCAGGCATCTTAGGAAAAGCCTTCAGGCCACAAGTGAATTTGTTGGAGAGCAAGACTTG AACTTGAATATCACACTCCAAAATTCCATCGAGAACTGCCTACTAGAAATTGCTGATGGGGTAGGTCTCCCCCCCCCCCT TCCCAAAAGGGGGGAAAATCACAATTTACTATTTATCCAGTCTCTCACTCTGCATTTCATTCACTTACAAAACTGCTGTT ATCTTTTCTGGTTGACTAGGTCATTGATGCTCAGCCACTATTTGACTTGATGACCATAAACCTGGAAAATATTCCATCTG GTGTCGTTGGAAGAGCAACCATCGGATCACTGATAATCCTTGCTCGCACAGTCACTTTAGCGTTGGCCCGTTTACGGTCG CAGCAGGTTAGAGGAGCTTGTTGTAATCGAACAGTGTGTAAAGTTAAAGCTGTACTGCAAATTGAAGCTAGGATACTTGG TAACATTGTTAAGAAAATATGATGATATATACTAGAACTTTAAATCTTTTACACGTTGGCGATGATGAGGCATTATCTGA AATATAACTTTGAACATATGAACAATTTAGCTAATTTGTTTCTTTAAGAAAATTCAAAGCGAGCCATATCCATCATTTAA TCAATTTTCCTTTTGCATTGAATGGTCTCCTTTTAATGATATTTGTTGGTGTTATCTTGGAATTTGTTCATTGATCAAGA TTTATGCTTCCATCTAGGGATTTCCTGAATCTCTTCTTGTGCAACTCCTAAATGTAATGCTGCATTCAGACGTGGAGGCT CGTGTTGGAGCACACCTTATATTTTCTGTACTTCTTTTTCCGAGCTCCTTCCATACACATGAAGTGTCGTCTCTGCGGTC CAGATATCTCGATCAACGCAATAAAAGGAATTCTCACACTACATCTGCATCTGCTTCAATTTCTGCTTTACTTGAAAAGC TCCGCAGAGGTAGAGATGGTTCCAAGCCAGAAAATCGTGGGACCATTGTTCATGATGGAAAAGAAAGGGATATCGTGGCT GAAGAGTCGAAGCAAAGCAGTGGCTTAAAGAATTCCCCTAACTTTTACAAACTCAGCTCTATCATTGAGAGGGCTACAGG ATCCCCAAGTCTGAATGAGACAGTAAGTAACTGAATTGATTTCTGTCAATGGTTTTTGTTAATTGTGATCATTCAAGGTA GAAATTTGTAATTTACCATGTTTTTGTATCATTTGGTTCTCAGGAACCGTATGTTTTGAAACTAAGTGAGGATCAAATGG CCCAGCTGCTTTCTGCCTTCTGGATTCAAGCCAATCTTCCAGATAATTTGCCTTCAAATATTGAAGCTATATCTGATTCA TTCATATTCACACTAATCGTTTTACGCATGAAGGTAGTTTTATTCTTTCTTGTACACATTGACATTAGAAGTTATATCCC ACTAGTTTTATCTTTACTGCTTTCGTGCTTTTTTACAGATATTATATGGTAAGTTGAATGTTTGTAGTTTTGAATTGCTA GTGTTTCTGCATAAAGAAAATATTCAAAATAGAAATATAGAAGTTAAACGAAATTAATGCTTACTAAGGTAAGTGTGATT CTGTCGGTTTTATCATCTCAAAATTTGTCTTCAATTTTAGTCTAGTTCTCGTCTTAGTTATATTCCCATTGACTAATCAC CTTACCCTCTACCCTATGAATTGTGTATGCTCTTACTCAGAAAATATTGAATTCTCATTTTCACAGGAACCTAAATGTAA TCAAAATCCTGACAGCACTTTCTTTTATGTACTTTTGTAATCATTATTGGGATACAATGTTGCAGAACCTGAAAGACAGG GAGAACCTGGTGATCCGCTTCTTTCAGCTTCCTTTGTCTCTGTGGACTTTGTTGCTGGACCCAAGTAATGGTATGACCTA TGTACACTATCTTTATGTGAACTATTTTATTTGAAAGGATATATAATTGTTCTTTTTGAAAACTAAAGAACAGAAGAATG TGAAAGTGATATACTTTTGTCCTGGCAGGAACGTTGCCCCCAGCATGTCAGAGGTCTATCTTTGTGCTATCTGCTTGCAT GTTGATATTTGCCTGCAAAATATATCAGATTCATGATCTGAATGATGTGTTCATGTCATTAGCAGTATCTGAAGTGAGTG ACTGCTCTTACTACTCTTTAATGCTAGAGGATTGCCTCCCTGCATAGTCTGAAAGAATTTATCTTAACGACTGCCTGCTT AAATAAACAGGTTGATCCATTCTTGGGTATCAGTGACGATCATCAAGTATATGCTAAGATCCATATGGATGTAAGAGATT ATGGTTCGGCTGCTGATAATCAGTTGGCCATGTCAATATTGCCCGAGTTACGAAACAGAATATGTAAATATCATCAAACC ATAAAGGATGTTTTGGTTCATAATTTAGCTATGATCATTGAGGTACTACATTTTATTCAGGCACCATATTTTGTTCATAA CCAACCATTCTCTTACTTTTTGGTTTTCCTGTTTCTTTAGCTGGATGCAGAAAACCTGGCTTTGCAATTGTCAGAGACCT TCCAGCCTGATGAAGAGTTTATGTTTGGTCCACAGTTAACTCTTGATCAGAATCAAGCGATTGAACATTCCCATGAGTCA CTGTCAATTGATGGGGTATGCTATCACTATTGACATAATGTCTTTGTTACTTTTATGTGGATAATTGGTACCAGATCAGT TTGCTGTATAATGTTTCTCCCACTGAAGTATACATGTGTTCAGAATGTTTTTAGAATTAGAAATATTTCAATTGAATAGC TCACTTTATCTGGCCATGATAAAATATATTGGTTTTGATCCCTTGCCCCTCCTTTCCTTCACCTAAACTTCTACTAGCCC TCGTGTCATGCCGACGGGATAGAATAAACGAAGAGTAAGTTTTGTAAAAGAGTACTGATCAGTTATTTTTCCAGGATTTT CCCTCAAACTCAGCAGGTGAAGATGACACAACCAGTGAAGCTTCCGTCTCTGACATTTCTAGATTTATTCCAAAGAATCC CGTATCCCCTTCTGCGCCTCATGTTATCAGCATTGGACAACTTATGGAATCGGTAACATTCTGTGTTCTTGCATGCTTCA ATGTATTAATAAGACATTGTTATGTAATAGAATCTATTGTGCCGCATCTGATGGTTTTGAACTAGCAGAATGACAATATA TTGGGTGAGAAAGTGAAAGTAATTTAAGTATTTAAGGGCAGTGCTATAAAAAAATTGAAATCCTATAAAAGAAATAAATA TACAGTCAACATTAAGTTTGAGGGTGTAGAGGATGCTTGTGGATGGGTAAGTAAGTGAAACACTTTAGTTACGTTCCAAT AGTTATATCTCCATGCATATTTTTCCAAGCAATATAAATGGAGTATGAACGTGGATTCCAAAATGCACACATATCAGTTA CCCATTGTTATTGTTCCTAAAAGCTTAACAACCCATCCATTGTTTCTAGGCACTAGAAGTAGCAAGTCAAGTGGCGGGAA CAACTGTCTCCACTACGCCCCTTCCCTACAACACCATGGCTAGCCAGTGTGAATCGCTCGGGACATGCGCAAGAAAGAAG CTCTCAAATTGGCTGGCCTACGAGAATCATCACACACAAACCCCTGATAGGTTATTTCTGGCTATTGCTGATCATAGAAA CTCAGCACTTGAAAAGGTATGTCTTAAGTCCATTGTGTTCAACATTCCTGATCATACACAGATTTACAGGAGCTCAACAA TCCATTGTGCTCTTTATTTGTCACGATTCTGATTATTTTATAGCATGTTAGGATCAGCTTCTTTTTTCTCAGAATCTATT ATATTATCCAGAAGTTATTCACAGAAGCTTCCAGAACTGATTTTGGCATTAGAATCAATGTAGAAGGATTTCTAAACACA CACTTAGGCGTTACCAGGGTTTATTCTATATATATCCAACTCTTTAACATTCATGCTGACATTATATTCTTGTAGGTGGC AAATGATGATGGGTATGCCCAAAACCAAGTAGCTGCATTGCCAAGGGACCCTAGGCTGGCTGTGAAACTTCCCCCTGCTA GCCCCTTTGACAATTTCCTTAAAGCTGCTGGGTGTTAG
CDS sequence (LotjaGi5g1v0230500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATCATCTCCCGGAAGATCTTCCCTGCATGTGGGAACATGTGTGTTTGCTGTCCTGCTTTGAGGTCAAGCTCACG CCAGCCAGTCAAACGTTACAAGAAATTGCTTGCTGACATCTTCCCCAAATCCCCGGATGAGCTTCCCAGTGAAAGGAAGA TTGTAAAATTATGTGAATATGCAGCAAAAAATCCTTTCCGGATTCCAAAGATTGCAAAATATCTTGAAGAAAGGTGCTAC AAAGAACTCAGATCTGGGCACATAAAACTGGTGACGATTATCACGGAATCGTTTAACAAGTTGCTTTCCATTTGTAAGGT GCAGATAGCATATTTTGCTCTTGATGTGCTTAACGTAATTACGGAGCTCTTGGGCTATTCTAAGGATGAAACAATTCAGA CACTCGGTTGCCAATCCTTAACAAGGTTCATCTTCTGTCAGGTAGATACTACTTATACTCATAACATTGAGAAATTGGTG AGGAAAGTATGCATCCTATCGCGGGAGCATGGGGAAACACATGAAAAGCGCTGCTTAAGGGCGTCAAGCTTGCAATGCCT TTCAGCAATGGTTTGGTTCATGGCTGAATTTTCGAACATTTTTGCTGATTTTGATGAGATTGTGTGTGCCACTTTAGATA ACTATGAGTGGATTAGGCAAAGTCAAGATGCCGATGTCAGGACAGAGGCGCATCATAATTGGGTGGATGAGGTTGTACGG TGTGAAGGTCGGGGTGGTTCAGTTGTTGGTAATGACATTCGCTCTAGCTGCTTGATCATCCAGCCACGGCCAGAAATAAA GGATCCTTCCCTTTTAACTAGAGAAGAAATTGAAAAACCTGAAGTATGGGCTCAGATATGCATTCAAAGAATGGTAGAAT TAGCCAAGGAAAGCACAACTATTCGTCGTGTACTGGATCCAATGTTCGTCTACTTTGATTCAAGGCAGCATTGGGCTACT CAGAATGGGTTAGCAATAATGGTTTTATCCAACATGGCTTACTTCATGGAGAACACGGGGAATCAACGCTTAATTCTAGC TTCTGTGATACATCATCTTGACCACAAAAATGTTATGAATGATCCCCAACTTAAGTCCTATGTAGTTCAAGTTGCCACAT CTTTAGCTATGCAAATTAAATCAAGGAGAGGATTGGCGGAGATTGGTTTTGTTGGCGACCTTTGCAGGCATCTTAGGAAA AGCCTTCAGGCCACAAGTGAATTTGTTGGAGAGCAAGACTTGAACTTGAATATCACACTCCAAAATTCCATCGAGAACTG CCTACTAGAAATTGCTGATGGGGTCATTGATGCTCAGCCACTATTTGACTTGATGACCATAAACCTGGAAAATATTCCAT CTGGTGTCGTTGGAAGAGCAACCATCGGATCACTGATAATCCTTGCTCGCACAGTCACTTTAGCGTTGGCCCGTTTACGG TCGCAGCAGGGATTTCCTGAATCTCTTCTTGTGCAACTCCTAAATGTAATGCTGCATTCAGACGTGGAGGCTCGTGTTGG AGCACACCTTATATTTTCTGTACTTCTTTTTCCGAGCTCCTTCCATACACATGAAGTGTCGTCTCTGCGGTCCAGATATC TCGATCAACGCAATAAAAGGAATTCTCACACTACATCTGCATCTGCTTCAATTTCTGCTTTACTTGAAAAGCTCCGCAGA GGTAGAGATGGTTCCAAGCCAGAAAATCGTGGGACCATTGTTCATGATGGAAAAGAAAGGGATATCGTGGCTGAAGAGTC GAAGCAAAGCAGTGGCTTAAAGAATTCCCCTAACTTTTACAAACTCAGCTCTATCATTGAGAGGGCTACAGGATCCCCAA GTCTGAATGAGACAGATTTTCCCTCAAACTCAGCAGGTGAAGATGACACAACCAGTGAAGCTTCCGTCTCTGACATTTCT AGATTTATTCCAAAGAATCCCGTATCCCCTTCTGCGCCTCATGTTATCAGCATTGGACAACTTATGGAATCGGCACTAGA AGTAGCAAGTCAAGTGGCGGGAACAACTGTCTCCACTACGCCCCTTCCCTACAACACCATGGCTAGCCAGTGTGAATCGC TCGGGACATGCGCAAGAAAGAAGCTCTCAAATTGGCTGGCCTACGAGAATCATCACACACAAACCCCTGATAGGTTATTT CTGGCTATTGCTGATCATAGAAACTCAGCACTTGAAAAGGTGGCAAATGATGATGGGTATGCCCAAAACCAAGTAGCTGC ATTGCCAAGGGACCCTAGGCTGGCTGTGAAACTTCCCCCTGCTAGCCCCTTTGACAATTTCCTTAAAGCTGCTGGGTGTT AG
Protein sequence (LotjaGi5g1v0230500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIISRKIFPACGNMCVCCPALRSSSRQPVKRYKKLLADIFPKSPDELPSERKIVKLCEYAAKNPFRIPKIAKYLEERCY KELRSGHIKLVTIITESFNKLLSICKVQIAYFALDVLNVITELLGYSKDETIQTLGCQSLTRFIFCQVDTTYTHNIEKLV RKVCILSREHGETHEKRCLRASSLQCLSAMVWFMAEFSNIFADFDEIVCATLDNYEWIRQSQDADVRTEAHHNWVDEVVR CEGRGGSVVGNDIRSSCLIIQPRPEIKDPSLLTREEIEKPEVWAQICIQRMVELAKESTTIRRVLDPMFVYFDSRQHWAT QNGLAIMVLSNMAYFMENTGNQRLILASVIHHLDHKNVMNDPQLKSYVVQVATSLAMQIKSRRGLAEIGFVGDLCRHLRK SLQATSEFVGEQDLNLNITLQNSIENCLLEIADGVIDAQPLFDLMTINLENIPSGVVGRATIGSLIILARTVTLALARLR SQQGFPESLLVQLLNVMLHSDVEARVGAHLIFSVLLFPSSFHTHEVSSLRSRYLDQRNKRNSHTTSASASISALLEKLRR GRDGSKPENRGTIVHDGKERDIVAEESKQSSGLKNSPNFYKLSSIIERATGSPSLNETDFPSNSAGEDDTTSEASVSDIS RFIPKNPVSPSAPHVISIGQLMESALEVASQVAGTTVSTTPLPYNTMASQCESLGTCARKKLSNWLAYENHHTQTPDRLF LAIADHRNSALEKVANDDGYAQNQVAALPRDPRLAVKLPPASPFDNFLKAAGC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 617 | 616 | 0.0 | – | |
| PANTHER | 2 | 617 | 616 | 0.0 | – | |
| SUPERFAMILY | 56 | 516 | 461 | 6.12E-7 | ||
| MobiDBLite | 558 | 595 | 38 | - | – | |
| MobiDBLite | 558 | 587 | 30 | - | – | |
| MobiDBLite | 611 | 645 | 35 | - | – | |
| MobiDBLite | 611 | 644 | 34 | - | – | |
| PANTHER | 614 | 773 | 160 | 0.0 | – | |
| PANTHER | 614 | 773 | 160 | 0.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0230500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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