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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0250800 |
| Transcript ID | LotjaGi5g1v0250800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LYR motif-containing protein 7 isoform 1; TAIR: AT4G02425.1 LYR motif protein; Swiss-Prot: sp|A8N1W8|MMM1_COPC7 Maintenance of mitochondrial morphology protein 1; TrEMBL-Plants: tr|I1JBL6|I1JBL6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0250800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55915993..55919213) extracted from Lotus japonicus Gifu genome v1.2.
ATAAGAAATGAAAATAGAAAAGAATTGTCTGAGAAATCACATATAGAGAGACCCTTTTCGGAAAATTAGGCGTGGAGGCA GTGATAGCTGGATCGAGAATCTCGTGAAACACAGCAATAGCATATCACTTGTCTTCCCTTCAGCTCACAACCCCAATTGA ATTGAATTGAATTCAGAATCACTCGATGACTCAATCGATGTCGCACAACCCACTCGAATCTTCATCACGCCACCACTCCA TCGACTCCTGCTTGTTGCACCTCCGCACCTGGAGACCCTTCCACCCCACAACCACCACCGCCGATCACACACCTTACAGC AAACGCCCTTGCCTCTCCGATCGCACCACCACCTCCTTCTCCCTCGACCTCTCCAAACTCACCCTCGCCGACGACAACAT CCGGAGCTACAACACCCCCGCCAAACACCGCCTCATCGCGCGAAAGAGGCGCCGACGCGGCTCCAGATCTGTCTCCGGCC GCAGCAGCGATCGCAGCGGTACGCGCCGCTGCTGCTCCGTTGGTGCCTCCGCTGCTCACGGGACTTGCTCTGATTTTCCG GTGGCGATGGGGACGGACTCCAGCGGGGAGCTTTTTGGGAACGGGGATGCGAATTGGTCGTCGGATGTGAGCGAGGCTAA GAACTCTGTGAGGGAAGTGGAGAAGGAGAAGGAGAATGTGGGTGGTGTTGTTGGGTTTGGGGTGAGTGGGTGTTCTGATG CTAATGGCAATAATGGGAATGAGTCTGGGTATGGGAGTGAACCTGGGTATCGTGGGGATGCTGAGTTTGGATATGGAGGG GATGAGTTTGATGAAGAAGAAGATGATCCCAGATTGTTGTTTTGGGGTGACCAGCTTGGAGGTAGGTTAAGTTTCTGTTC TTGATTTCAGATTTTGATGTTCATGTTGTTGCTTGCTTTAGAATTTTTGAATCTTTTTGCTTGTCTTTTAGATCATTAAG CACAACCTTGTCTACTACATGGGTTTGGATGATATAGTATTTGGTGTGTTCACCAACTTAAGTGAAAGTGTTCTGTTTGG AATCTTTAAAATGAAAGATTGGAGTTCTTCTCTAAGAATTCAATTCCTTTTACACATCATTTGATAAACAAGGATAGAAG CCACCAAAATGATGAGAGTAGTGTGATAAGCAAGGAAGTAGCGGAAGCCACCAAAATGATGGCATTGTTTCTATGAGTAC TTAAAGAGCCAGTGGTCTGAGGCTGGGGAGCAGAAACCGGAGGCTAATGCTGGAGAACATGGATAGAAAAACCAGGCATG GTCTGAGGTCAATGAAAATGGAAGTTAGAGATAGAGATCGGGAAAGGATTATCCTAGTCTCACTTGGCGTAAAATTTAAC CCCTTAAAGAGGGAAACATATACTTCCCGTTAAATTCCCTTTTCGTTAATGTGATACCAAACAAGTCACTATTTTTAAGA AACTTGACTCCCTTAAAATCCCCTCCCCCCCCCCCCCCCATTTAACCTCGAGCCGAACTTAGCACTAATGATATTATATC TATTGTTGGGAGGGTAATGCTTGGGTTCCTTCATGCCATGTTATGTTGATGGATCATTATCAGTTGGAATTATTGGGTCC AAGTATATGGATAAATATAGCTAGTCATTTTATTATTTTTATGTTTAGTTATTTTATTCTCTTCTAGGATATTCCTAGTG GTGGGATTATGCCGCTTTTACGGCTCTCCTTAGCATACGGGTTAAATCCTAACTATAAATTGAAAAGTTGATCAATGAGA AAGGGACCAGAAAATTGATGCAATTGCTTTCTTCATTATTTAGCTTAGCTTTTTCTTATAGAAATTAGGGCTCTACCTTG ATAGAGAATTTCACTCTATCAATTGGTGCTTTCTGGTAGTGCTAATATGAAGTTACATGTTATATGTGGCAAAAACTTAT TATTTGATGTTTGGAAAACAGGTTGTTTGCAAATGGCTTTACTGTTTTGGTAGTAACTTTTGGGGGTTATGAAATGAAAT ATTCTGAAGATGATGACTTAACCACTGGAAATAGCTAAAATACATTTACAAGGAAATGTGTTTTTGCTATCTATTTCTAC TTATGCCTGGTGTAATTTGCTTTCCTGTTTGCAGACTACCTTCCTTAAAAGATTACCAATGTCAATGTTCTAAAGCATGC CATGAGAGTTTAAATGGAACTTTGATTTTATATGCTTGGTTGTTATTTGGATTAGAAGCTTTGTTTCCTTACAAGCATTT CTGATCCTCTGTTGCACGTGCCTGTGGATAGACACCAACTATATTATTTGCAATTATTTGCCATAATGGATAGCTTGAAA GGTTCTATGTTCATTTTCTAGTCTGATTGTAGTTTTTAGATTTCGCACACTATTATCTTAATAGCATTATATACTTAGGC ATTTGTTGCATATAAAACTAGTACTACAACTGGCTGCTTAAGAGGCTAACTTGATCTTCATTGTACCAGCTGCAGATTCT AAAATGGAGATGGTTGGGGAGAACACCTTGCTAGATCAAAAATCACATCATAGATGTCGACGTAGGAAGCATGATTGTAG AATGTTTGATGCATTGAGGTGACAGTCGCTGAAGTTTGTGACTGTGATCATGACAAGATTGTATCTTTCCTTCTTCAACA AGGAACTGGAGTTGCTTCTTTTGTGCATGAATCCCTGACAAAGTGGTTTTAGAGCATCCATGTGATGCTTCTTACCGGCA TCCTGACCCATTTGCCGAATCTATATTCTTTGTATTTTAGCATGTATCATATCATATAGGTTTGGGGATCATTCAGCTTC TGAAAATTTTGGTCCAAATATTGAAGTGATCTAAGGATAATGACGTGTGATTGTTACAAGGACGTAAAACTATTACGCTT TGTATATTAGTTTGAGATGTTGTGCCCCATTTAATCTCAGTCATACAAATTTCTTAGAACACAGTTACAAAAATCTCTAG TAAATAGACCTTTCATTACTGTCTTGAGTTTTTATCAATGTCTGAAGTATTTAGCACAAACTATTTTGTACCTAAAATGA TATGAAGCTTGTTACAACCAATCACGTTTTGAGTATCGGGTGGAAATCAATATTTATATACCTTCTAGCTAGCGTGGTGG GCATGATTATCCAAAATGAAGCCAAATTGTTGTTCATTAAAATGAATTGCTGTTTGCTGCTTTTAAATCTACATAATCAC TCTCATACACTTATAGTTGAG
CDS sequence (LotjaGi5g1v0250800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCAATCGATGTCGCACAACCCACTCGAATCTTCATCACGCCACCACTCCATCGACTCCTGCTTGTTGCACCTCCG CACCTGGAGACCCTTCCACCCCACAACCACCACCGCCGATCACACACCTTACAGCAAACGCCCTTGCCTCTCCGATCGCA CCACCACCTCCTTCTCCCTCGACCTCTCCAAACTCACCCTCGCCGACGACAACATCCGGAGCTACAACACCCCCGCCAAA CACCGCCTCATCGCGCGAAAGAGGCGCCGACGCGGCTCCAGATCTGTCTCCGGCCGCAGCAGCGATCGCAGCGGTACGCG CCGCTGCTGCTCCGTTGGTGCCTCCGCTGCTCACGGGACTTGCTCTGATTTTCCGGTGGCGATGGGGACGGACTCCAGCG GGGAGCTTTTTGGGAACGGGGATGCGAATTGGTCGTCGGATGTGAGCGAGGCTAAGAACTCTGTGAGGGAAGTGGAGAAG GAGAAGGAGAATGTGGGTGGTGTTGTTGGGTTTGGGGTGAGTGGGTGTTCTGATGCTAATGGCAATAATGGGAATGAGTC TGGGTATGGGAGTGAACCTGGGTATCGTGGGGATGCTGAGTTTGGATATGGAGGGGATGAGTTTGATGAAGAAGAAGATG ATCCCAGATTGTTGTTTTGGGGTGACCAGCTTGGAGCTGCAGATTCTAAAATGGAGATGGTTGGGGAGAACACCTTGCTA GATCAAAAATCACATCATAGATGTCGACGTAGGAAGCATGATTGTAGAATGTTTGATGCATTGAGGTGA
Protein sequence (LotjaGi5g1v0250800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQSMSHNPLESSSRHHSIDSCLLHLRTWRPFHPTTTTADHTPYSKRPCLSDRTTTSFSLDLSKLTLADDNIRSYNTPAK HRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPVAMGTDSSGELFGNGDANWSSDVSEAKNSVREVEK EKENVGGVVGFGVSGCSDANGNNGNESGYGSEPGYRGDAEFGYGGDEFDEEEDDPRLLFWGDQLGAADSKMEMVGENTLL DQKSHHRCRRRKHDCRMFDALR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 262 | 249 | 2.4E-102 | – | |
| MobiDBLite | 86 | 109 | 24 | - | – | |
| MobiDBLite | 176 | 212 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0250800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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