Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0250800 |
| Transcript ID | LotjaGi5g1v0250800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LYR motif-containing protein 7 isoform 1; TAIR: AT4G02425.1 LYR motif protein; Swiss-Prot: sp|A8N1W8|MMM1_COPC7 Maintenance of mitochondrial morphology protein 1; TrEMBL-Plants: tr|I1JBL6|I1JBL6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0250800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55916171..55919142) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAGGCAGTGATAGCTGGATCGAGAATCTCGTGAAACACAGCAATAGCATATCACTTGTCTTCCCTTCAGCTCACAAC CCCAATTGAATTGAATTGAATTCAGAATCACTCGATGACTCAATCGATGTCGCACAACCCACTCGAATCTTCATCACGCC ACCACTCCATCGACTCCTGCTTGTTGCACCTCCGCACCTGGAGACCCTTCCACCCCACAACCACCACCGCCGATCACACA CCTTACAGCAAACGCCCTTGCCTCTCCGATCGCACCACCACCTCCTTCTCCCTCGACCTCTCCAAACTCACCCTCGCCGA CGACAACATCCGGAGCTACAACACCCCCGCCAAACACCGCCTCATCGCGCGAAAGAGGCGCCGACGCGGCTCCAGATCTG TCTCCGGCCGCAGCAGCGATCGCAGCGGTACGCGCCGCTGCTGCTCCGTTGGTGCCTCCGCTGCTCACGGGACTTGCTCT GATTTTCCGGTGGCGATGGGGACGGACTCCAGCGGGGAGCTTTTTGGGAACGGGGATGCGAATTGGTCGTCGGATGTGAG CGAGGCTAAGAACTCTGTGAGGGAAGTGGAGAAGGAGAAGGAGAATGTGGGTGGTGTTGTTGGGTTTGGGGTGAGTGGGT GTTCTGATGCTAATGGCAATAATGGGAATGAGTCTGGGTATGGGAGTGAACCTGGGTATCGTGGGGATGCTGAGTTTGGA TATGGAGGGGATGAGTTTGATGAAGAAGAAGATGATCCCAGATTGTTGTTTTGGGGTGACCAGCTTGGAGGTAGGTTAAG TTTCTGTTCTTGATTTCAGATTTTGATGTTCATGTTGTTGCTTGCTTTAGAATTTTTGAATCTTTTTGCTTGTCTTTTAG ATCATTAAGCACAACCTTGTCTACTACATGGGTTTGGATGATATAGTATTTGGTGTGTTCACCAACTTAAGTGAAAGTGT TCTGTTTGGAATCTTTAAAATGAAAGATTGGAGTTCTTCTCTAAGAATTCAATTCCTTTTACACATCATTTGATAAACAA GGATAGAAGCCACCAAAATGATGAGAGTAGTGTGATAAGCAAGGAAGTAGCGGAAGCCACCAAAATGATGGCATTGTTTC TATGAGTACTTAAAGAGCCAGTGGTCTGAGGCTGGGGAGCAGAAACCGGAGGCTAATGCTGGAGAACATGGATAGAAAAA CCAGGCATGGTCTGAGGTCAATGAAAATGGAAGTTAGAGATAGAGATCGGGAAAGGATTATCCTAGTCTCACTTGGCGTA AAATTTAACCCCTTAAAGAGGGAAACATATACTTCCCGTTAAATTCCCTTTTCGTTAATGTGATACCAAACAAGTCACTA TTTTTAAGAAACTTGACTCCCTTAAAATCCCCTCCCCCCCCCCCCCCCATTTAACCTCGAGCCGAACTTAGCACTAATGA TATTATATCTATTGTTGGGAGGGTAATGCTTGGGTTCCTTCATGCCATGTTATGTTGATGGATCATTATCAGTTGGAATT ATTGGGTCCAAGTATATGGATAAATATAGCTAGTCATTTTATTATTTTTATGTTTAGTTATTTTATTCTCTTCTAGGATA TTCCTAGTGGTGGGATTATGCCGCTTTTACGGCTCTCCTTAGCATACGGGTTAAATCCTAACTATAAATTGAAAAGTTGA TCAATGAGAAAGGGACCAGAAAATTGATGCAATTGCTTTCTTCATTATTTAGCTTAGCTTTTTCTTATAGAAATTAGGGC TCTACCTTGATAGAGAATTTCACTCTATCAATTGGTGCTTTCTGGTAGTGCTAATATGAAGTTACATGTTATATGTGGCA AAAACTTATTATTTGATGTTTGGAAAACAGGTTGTTTGCAAATGGCTTTACTGTTTTGGTAGTAACTTTTGGGGGTTATG AAATGAAATATTCTGAAGATGATGACTTAACCACTGGAAATAGCTAAAATACATTTACAAGGAAATGTGTTTTTGCTATC TATTTCTACTTATGCCTGGTGTAATTTGCTTTCCTGTTTGCAGACTACCTTCCTTAAAAGATTACCAATGTCAATGTTCT AAAGCATGCCATGAGAGTTTAAATGGAACTTTGATTTTATATGCTTGGTTGTTATTTGGATTAGAAGCTTTGTTTCCTTA CAAGCATTTCTGATCCTCTGTTGCACGTGCCTGTGGATAGACACCAACTATATTATTTGCAATTATTTGCCATAATGGAT AGCTTGAAAGGTTCTATGTTCATTTTCTAGTCTGATTGTAGTTTTTAGATTTCGCACACTATTATCTTAATAGCATTATA TACTTAGGCATTTGTTGCATATAAAACTAGTACTACAACTGGCTGCTTAAGAGGCTAACTTGATCTTCATTGTACCAGCT GCAGATTCTAAAATGGAGATGGTTGGGGAGAACACCTTGCTAGATCAAAAATCACATCATAGATGTCGACGTAGGAAGCA TGATTGTAGAATGTTTGATGCATTGAGGTGACAGTCGCTGAAGTTTGTGACTGTGATCATGACAAGATTGTATCTTTCCT TCTTCAACAAGGAACTGGAGTTGCTTCTTTTGTGCATGAATCCCTGACAAAGTGGTTTTAGAGCATCCATGTGATGCTTC TTACCGGCATCCTGACCCATTTGCCGAATCTATATTCTTTGTATTTTAGCATGTATCATATCATATAGGTTTGGGGATCA TTCAGCTTCTGAAAATTTTGGTCCAAATATTGAAGTGATCTAAGGATAATGACGTGTGATTGTTACAAGGACGTAAAACT ATTACGCTTTGTATATTAGTTTGAGATGTTGTGCCCCATTTAATCTCAGTCATACAAATTTCTTAGAACACAGTTACAAA AATCTCTAGTAAATAGACCTTTCATTACTGTCTTGAGTTTTTATCAATGTCTGAAGTATTTAGCACAAACTATTTTGTAC CTAAAATGATAT
CDS sequence (LotjaGi5g1v0250800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCAATCGATGTCGCACAACCCACTCGAATCTTCATCACGCCACCACTCCATCGACTCCTGCTTGTTGCACCTCCG CACCTGGAGACCCTTCCACCCCACAACCACCACCGCCGATCACACACCTTACAGCAAACGCCCTTGCCTCTCCGATCGCA CCACCACCTCCTTCTCCCTCGACCTCTCCAAACTCACCCTCGCCGACGACAACATCCGGAGCTACAACACCCCCGCCAAA CACCGCCTCATCGCGCGAAAGAGGCGCCGACGCGGCTCCAGATCTGTCTCCGGCCGCAGCAGCGATCGCAGCGGTACGCG CCGCTGCTGCTCCGTTGGTGCCTCCGCTGCTCACGGGACTTGCTCTGATTTTCCGGTGGCGATGGGGACGGACTCCAGCG GGGAGCTTTTTGGGAACGGGGATGCGAATTGGTCGTCGGATGTGAGCGAGGCTAAGAACTCTGTGAGGGAAGTGGAGAAG GAGAAGGAGAATGTGGGTGGTGTTGTTGGGTTTGGGGTGAGTGGGTGTTCTGATGCTAATGGCAATAATGGGAATGAGTC TGGGTATGGGAGTGAACCTGGGTATCGTGGGGATGCTGAGTTTGGATATGGAGGGGATGAGTTTGATGAAGAAGAAGATG ATCCCAGATTGTTGTTTTGGGGTGACCAGCTTGGAGATTCTAAAATGGAGATGGTTGGGGAGAACACCTTGCTAGATCAA AAATCACATCATAGATGTCGACGTAGGAAGCATGATTGTAGAATGTTTGATGCATTGAGGTGA
Protein sequence (LotjaGi5g1v0250800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQSMSHNPLESSSRHHSIDSCLLHLRTWRPFHPTTTTADHTPYSKRPCLSDRTTTSFSLDLSKLTLADDNIRSYNTPAK HRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPVAMGTDSSGELFGNGDANWSSDVSEAKNSVREVEK EKENVGGVVGFGVSGCSDANGNNGNESGYGSEPGYRGDAEFGYGGDEFDEEEDDPRLLFWGDQLGDSKMEMVGENTLLDQ KSHHRCRRRKHDCRMFDALR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 260 | 247 | 1.0E-101 | – | |
| MobiDBLite | 86 | 109 | 24 | - | – | |
| MobiDBLite | 176 | 214 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0250800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…