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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0263700 |
| Transcript ID | LotjaGi5g1v0263700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT1G03010.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010; TrEMBL-Plants: tr|A0A151TWS2|A0A151TWS2_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi5g1v0263700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57326040..57329079) extracted from Lotus japonicus Gifu genome v1.2.
TGTTGTCTGAGGTACTTTTTAACTAGTCCCACTCAAATTCTGTTTTATCATTGAGTTGGGGCCATTCCCATCTAGTAGCA CTTGATCTTGGAAGATTACACTGTCTTTTGGTTTGTGGTGTACAAAACACACACATTGAACTCCACCTTCTACATTAAAT TGCACATACACCCTGCAGCTATAAACTCTCTTAATATTTCACTTTGGTAATAATATAGTAATATGTGTAGCTGCACTTCT TGCTTTAGACAGATATTTCCATGTCTACACCTTGCAATTATTCACCTAAATTTGCATATTACAGGCCTATATCTGATGTA TCTAGTGACCTTACCATTGAAATAGGAGCTTCAAGCTTTGCACTTCACAAGGTAAAGAAACAAGCTACCTTTCTCACAGG TTACTGCATATTTAGCATAGCATAGGTATTCATAAAAAATGCCATTTTTCGGTGAATTTCATAAATATTGATTTTTTATG CATGTTTTAACACCTTCTAAAAGAATTTCAAGCTTAATATTAGGACAGTAGACATTAGCAGCCAGGGTAAAAATCATAAG AAGGCTTTATTCATGCAATTCCACAACTCATTGCAATTTTTTCTTCTACAGTTTCCTCTAGTTTCTCGGAGTGGAAGAAT TAGGAAACTTCTGTTAGAAGCAAAAGATTCTAGAGCTTTGCGTGTAAGTCTCCCAAATGTGCCAGGGGGTGCAGAGGCGT TTGAGCTTGCTGCAAAATTCTGTTATGGAATTAATGTTGAGTTCACCCTCTCCAATGTTGCTATGCTAAAATGTGCTTCC CATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTGGAGACGCGAGCGGAGGCGTATCTAAAGGAGACTGTGCT ACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGAAACTCTTCTTCCCATTGCAGAAGAGATTAGCCTTGTTA GCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGCAGCTAACTTCTGGTTTACAAAAACTGGACCATAACCAT TTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCCTTAGAATGGTGGGGAAAGTCACTCAATGTTCTTAATCT TGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGGACTAAAACAAGAACTTATCAGCAAAATTTTGATAAACT ATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTCATGCTGTCAAAGGGAAACTTGACTTAGAATTACAGAAG AAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCAACTCAATCAAGGAAAAGCCCGGTTCCAATCGCGTTTCT CTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGGCTCTTGCAGAGCTGATTTGGAAAGGAGGATTGGTTTGC AACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAAACTCACATCAAAATAATACTCACAGCACCATTTATGAC ACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTGGATGATGAGGATGAAGATGATAACCACATGAGGGATGA AAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAAACAAAGCTCAATTCTGAAGGTATCCAAATTGCTTGACA ACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCATCAAAGTTCACATCACTTGTGGAACTACTTCCAGATCAT GCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTGAGCTTTGCTTCTCTCTTTCACTATCA TTTGTCATGAAACAACTATCTAACTCGTCCCTTCATGCAAGAGCATATTGGGCTTGAAGCATGGAAAATGCATATACTGA AAATTAACTTTCTATGAGAATCATAGGGCAAACAAAGATTGAACTCTTGACTACTTAGTACATGTTTGGATCACCATTTC CAGAATTGTTTTTGGGAAAGTATGGTAAAAGTATGTTGAATTTGAAGTGATATATGTTTAAATACACGATTCCCCTTTTC TATATGGTAATATGAAATCTAGTTAGTGCATGTTCGGATACATGGTAGAAAAACACGATGAAGTCAAAATCATGGTGGAA AGAAATAAAAGTTATTTCTGTTCATCGTGATTTTCTACCGTGTATTAAAACAAGTGCTTATAAAATCTCATAATTGATTA TGTCCACTGCAGAAGCGGCTTTCTATAGCTTTTCTACAAAATTGATTTTGGAACTAAAGTCTATTGTCAAACATATATAT AGAGTGAGTCTGGTCTATGAGAATTGATACCATTACTCCCAAATGTGGAAACAAACACATATTTAATCATAGAAACTCAT ACTATTGATACTATGTCATGAATAAATAACTACCCAAAACTTAAACCCTACTTACCCATTTGTTTGTTTTCTACTTTTGT CACATACATACATACAGGTTCATCCAAACATGAAGGACTCAGAACGTTATCGTCTCTGCAAAACCATTGACTGCAACAAA CTATCTCAAGAAGCCTGCAGCCACGCCGCACAAAACGAAAGACTACCAGTGCAGATGGCAGTGCAAGTTCTCTACTTCGA GCAAATCAGGCTCCGGAACGCCATGAACGGCGGAGGCAACAACCAATTCTTCTTCGGCGCCGGGTTCAACGCTCATCAAT TCCCTCAACGTTCAGGGAGCGGTGCAGGAAGCGGAGCCATTTCTCCGAGAGACAACTACGCTTCAGTGAGAAGAGAAAAC AGAGAGCTGAAGCTTGAGGTTGCGAGGATGAGAATGAGGCTCACTGATTTGGAGAAAGACCATGTTTCCATGAAGCAGGA GCTTGTGAAGTCTCACCCTGCGAACAAGCTGTTCAAATCTTTTACAAAGAAAATGAGCAAGCTCAATGCTCTGTTTCGGA TGAATGGTATCAAGATGAATGGTGCTGGTTCTGAGAGCAGGTTTCCTTTTGCAAAGAGAAGGCGTCACTCAGTTTCATGA
CDS sequence (LotjaGi5g1v0263700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAAAATGTGCTTCCCATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTGGAGACGCGAGCGGAGGCGTA TCTAAAGGAGACTGTGCTACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGAAACTCTTCTTCCCATTGCAG AAGAGATTAGCCTTGTTAGCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGCAGCTAACTTCTGGTTTACAA AAACTGGACCATAACCATTTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCCTTAGAATGGTGGGGAAAGTC ACTCAATGTTCTTAATCTTGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGGACTAAAACAAGAACTTATCA GCAAAATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTCATGCTGTCAAAGGGAAACTT GACTTAGAATTACAGAAGAAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCAACTCAATCAAGGAAAAGCCC GGTTCCAATCGCGTTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGGCTCTTGCAGAGCTGATTTGG AAAGGAGGATTGGTTTGCAACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAAACTCACATCAAAATAATACT CACAGCACCATTTATGACACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTGGATGATGAGGATGAAGATGA TAACCACATGAGGGATGAAAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAAACAAAGCTCAATTCTGAAGG TATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCATCAAAGTTCACATCACTTGTG GAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAA CATGAAGGACTCAGAACGTTATCGTCTCTGCAAAACCATTGACTGCAACAAACTATCTCAAGAAGCCTGCAGCCACGCCG CACAAAACGAAAGACTACCAGTGCAGATGGCAGTGCAAGTTCTCTACTTCGAGCAAATCAGGCTCCGGAACGCCATGAAC GGCGGAGGCAACAACCAATTCTTCTTCGGCGCCGGGTTCAACGCTCATCAATTCCCTCAACGTTCAGGGAGCGGTGCAGG AAGCGGAGCCATTTCTCCGAGAGACAACTACGCTTCAGTGAGAAGAGAAAACAGAGAGCTGAAGCTTGAGGTTGCGAGGA TGAGAATGAGGCTCACTGATTTGGAGAAAGACCATGTTTCCATGAAGCAGGAGCTTGTGAAGTCTCACCCTGCGAACAAG CTGTTCAAATCTTTTACAAAGAAAATGAGCAAGCTCAATGCTCTGTTTCGGATGAATGGTATCAAGATGAATGGTGCTGG TTCTGAGAGCAGGTTTCCTTTTGCAAAGAGAAGGCGTCACTCAGTTTCATGA
Protein sequence (LotjaGi5g1v0263700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKCASHFLEMTEEFAEKNLETRAEAYLKETVLPNISSTISVLHRCETLLPIAEEISLVSRLINAIANNVCKEQLTSGLQ KLDHNHFPSKSISNMEPETPLEWWGKSLNVLNLDFFQRVLSAMKSKGLKQELISKILINYAHNSLQGMVVRDPHAVKGKL DLELQKKQRVIVEAIAGLLPTQSRKSPVPIAFLSSLLKAAIAASASGSCRADLERRIGLQLDQAILEDILIPTNSHQNNT HSTIYDTDSILRIFSIFLNLDDEDEDDNHMRDENEMIYDFESPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFTSLV ELLPDHARIVSDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCNKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMN GGGNNQFFFGAGFNAHQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANK LFKSFTKKMSKLNALFRMNGIKMNGAGSESRFPFAKRRRHSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 519 | 519 | 3.3E-286 | – | |
| PANTHER | 1 | 519 | 519 | 3.3E-286 | ||
| Pfam | 102 | 370 | 269 | 7.7E-86 | ||
| ProSiteProfiles | 102 | 394 | 293 | 85.277 | ||
| Coils | 437 | 471 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0263700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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