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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0278000 |
| Transcript ID | LotjaGi5g1v0278000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ureidoglycolate hydrolase, putative; TAIR: AT2G35820.2 ureidoglycolate hydrolase; Swiss-Prot: sp|P25293|NAP1_YEAST Nucleosome assembly protein; TrEMBL-Plants: tr|I3S928|I3S928_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0278000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59324958..59327568) extracted from Lotus japonicus Gifu genome v1.2.
GCCAAATAGTAATTAATGAAGAGAAACAAAGAAAAGCAGTAGTTGTCATTTGTCACTCATCACACGAACAGCATCTATAT TTCATGTCTGGATTCGCATTCGTCTGCCACGTGATAAAACTCCCACCTCGTGCTTATATACACCGCCGTGATTCCTATCA GGGATTGAAACGCAGTCGCAGAAGCAAACACTCGCTATCTATCTCATCATCATCACCATCATCAGCAATGGAGGAACCAA AGCTGCTGAAGCTGAAACCAATCGAAGCTACTCCGGCAACCTTCAAAGACTACGGCCAGGTCATCCAAGCTTCCCCGGAC GGCCACGGCTTCGGTCCTCATGATGCTCAACTCGACCTCACCCGAGGAATTCCCAGGTGAAATCAAATCTATCTAGTTAC AAGAATCATGGTTAGGAAATTGAAAAAAATTGCTTGGTTAAATTGTATTCGATTGATATAGGCTAATGTCAAATTTATAT TTATAGAGATGATTTGATTGTTTCATGTAATGTTGTGTTAGACCGATCGATCAGAGTAGAGAGAAACACACAAACTTTTG TCACGCAGTTCGGCCAAATTGCCGACATCTGCGACTATAGAGCAGCTATAATTCCGTTTTATTGATTCGTTCTAAATATA ATAATTAAGGTTTCAGTGTTACAAGCATATAAAGTTTATAAATGCATCATCGGCCGTTGCCCACTTGACATTAGCGGTTA GCCCATGAGCCATACTCAACATGTTGTCTATGTTTCTTGCTATTTGGATTATACTATCATGAGTCATGACATAAAGTGCA CAAAGTAAACCATATTTTCTTCCTATTACTGCATTGGATGAATTTAAATCATATTGTACCTAGGAACAAACAAAATATAC TGATGATTATGTTAAAATTGCCCCTGCAGTTTATATCAAAATCGAATAGATACTTTGGAATTCATTGTGAAAACTTTTCA AAATCTGCTTTTCTATTCATGCTCTGATAGTCAATCAAGGTTAACTGAGCTGGCATAGTTGTTAGATTGCTCAATTTAGA TTGACATTGAGCTGCATTCCATGGACAGGTTCTATATTATGCATCTTGAAAACCGCCCGCTTAAGTTCTCTAATATCACA CATCATGCAAGCGTGACTCAGTGCCTTGGGTCCATTGGAGGTCATGCGTGGTATCTTGGGGTGGCTAAGCCATCTATTGT TGACTCCAGTGAAATCAAGGATGACACTGACAGGAAAGTTGTGCAGTCACGCTCCGGTCATCTATACGTGCCTCCTGCTA TTGAGGACATCCATGTTTTCAAGGTTACAGGTTCCAAATTTCTCAAGCTTAATCGTGGGACATGGCATGCTGGCCCTATA TTTAAGGCTGACTCAATGGACTTCTACAATCTGGAACTGAGCAATACAAATGTGAGTTTTTCATCTTCCCTTTCTCTGGA GTGCTACAAGTTCATTTGCAATCCTCCTTTTAAGACCTGGAATTATAACTTCAATTTTTTGGTTTCCTCTTTATTTCCTA GTCTTGTGCAATAACTTCTGGTATGGAGTCCCAGATGGATATAGATAATTGAGCTTGTTTCCTAGGATGAGTTCACTAGG CTATATTTGGATACCCTTTGAAACAAAAACTAACGTTAACACTCAATTCGAGACAAAAAGTGAACAAAACTCAATTGGAT TAAAGTCTGTACAGGTTGTACTCAATTGGATTGAATCACACTAAAAAACTGAACATCAAGAAAAATGACACTTAGTTTAG TTCTTTTCTTCTTCTTTTATTTGTGCAGAAGGTGGGTTTTATTTGTTGTTCTTTTTTGTTTTAGTGGATATTGCTCTGGT TTATTTGGCTTTTTCTCCTATGTGCAGGAGATTGACCATACCACACACAACTTTAAGAAGGACAATGGAGTGATCTTCTC AATCGATGAGTAATGGTGTAGCGGAATTTTCAGTGTTTCAACTGATTCTGCATACTGTATATTATTAAGAGAGAAATAAC ACATGTTATATACTATATATAATTCCCGGAAACTTCAGAATGTACTTCATTTGATGCTGCTACTCAACTTTTTCATGTAC TCTTATAATCTGTTATCCTATGAGATGGTTACCATTTCATGTTTAAAAGAGAGTGAAATAGACCGCTCAATCTAGGGTGG ACCGGCTAAAATAATGGTCCACTCACGGACCACTTAGTAAATTTTTCCAAAGACAAAACCATCCCCAATGGATAAAATTA TTCCTATAATTATCCCCAACCTCATTTTTTCATCCTCTTTGACGGCAACGGTGAAGCAACTAAATACAACGACAACTTGT CACAACGTCAAATGGAAGCGACCAACATCAACGGGGAACAGTCACGTTCCTTCTCCCTCTGGCCTCCCAATCACGGTGAA TTGCAAAGTCCAACATTGTGGTTCGTCAGTTATGTTCCCATCAAGATCCAATTTGGCCTATGAGGTTTCTCCATGTGCAA TGCTCGTACCTGGTGGAGAAGATGAAAAAATGATTTGAGACAAAGATTCAATTGCTAGTCACGTTCCCATCAAGATTCAA ATTTTCCATCAGCGCTCTAAGATCCACCAAGTTTCCTCCATAAAGAACCAA
CDS sequence (LotjaGi5g1v0278000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGATTCGCATTCGTCTGCCACGTGATAAAACTCCCACCTCGTGCTTATATACACCGCCGTGATTCCTATCAGGG ATTGAAACGCAGTCGCAGAAGCAAACACTCGCTATCTATCTCATCATCATCACCATCATCAGCAATGGAGGAACCAAAGC TGCTGAAGCTGAAACCAATCGAAGCTACTCCGGCAACCTTCAAAGACTACGGCCAGGTCATCCAAGCTTCCCCGGACGGC CACGGCTTCGGTCCTCATGATGCTCAACTCGACCTCACCCGAGGAATTCCCAGGTTCTATATTATGCATCTTGAAAACCG CCCGCTTAAGTTCTCTAATATCACACATCATGCAAGCGTGACTCAGTGCCTTGGGTCCATTGGAGGTCATGCGTGGTATC TTGGGGTGGCTAAGCCATCTATTGTTGACTCCAGTGAAATCAAGGATGACACTGACAGGAAAGTTGTGCAGTCACGCTCC GGTCATCTATACGTGCCTCCTGCTATTGAGGACATCCATGTTTTCAAGGTTACAGGTTCCAAATTTCTCAAGCTTAATCG TGGGACATGGCATGCTGGCCCTATATTTAAGGCTGACTCAATGGACTTCTACAATCTGGAACTGAGCAATACAAATGAGA TTGACCATACCACACACAACTTTAAGAAGGACAATGGAGTGATCTTCTCAATCGATGAGTAA
Protein sequence (LotjaGi5g1v0278000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGFAFVCHVIKLPPRAYIHRRDSYQGLKRSRRSKHSLSISSSSPSSAMEEPKLLKLKPIEATPATFKDYGQVIQASPDG HGFGPHDAQLDLTRGIPRFYIMHLENRPLKFSNITHHASVTQCLGSIGGHAWYLGVAKPSIVDSSEIKDDTDRKVVQSRS GHLYVPPAIEDIHVFKVTGSKFLKLNRGTWHAGPIFKADSMDFYNLELSNTNEIDHTTHNFKKDNGVIFSIDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 24 | 53 | 30 | - | – | |
| PANTHER | 47 | 233 | 187 | 2.8E-99 | – | |
| SUPERFAMILY | 55 | 231 | 177 | 1.51E-34 | ||
| Gene3D | 55 | 232 | 178 | 5.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ureidoglycolate hydrolase activity | Catalysis of the reaction: (S)-ureidoglycolate + H(2)O + 2 H(+) = CO(2) + glyoxylate + 2 NH(4)(+). |
Expression pattern of LotjaGi5g1v0278000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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