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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0279500 |
| Transcript ID | LotjaGi5g1v0279500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I1LD68|I1LD68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0279500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59471635..59473457) extracted from Lotus japonicus Gifu genome v1.2.
AGCAGAAAAATTAAGTACTGGAAAATATGGGGGATTTCTATTCCACCAAAGTTGAGCAGCTTAAATTTTCCTCTAATCAA ACAGAGGATAGTGCTTGCTTATCAGCAATGCTGGCCAGTACCAATATAGTATACCCTGCAGTTTTGAATGCTGCTATTGA ACTCAACTTGTTTGAGATCATTGCTAAGGCAACACCATCTGGTGCATTCAAGTCACCCTCTGAAATTGCTTCCAAGATCC CAACCCAACACTCAGACTTGCCTAACAGGCTTGAACGCATGCTGCGTTTGCTCGCAAGTTACTCCGTTCTTACTTGTTCC ACTCGCACCACTGATAATGGTAGCACTGAGAGAGTTTATGGGCTCACAGAAGTTGGAAAATACTATGTCCCTGATGAGAA TAGGGGCAACTTGGCTTCACATGTTTCACTTCTCTGCTATCCAGCATTGTTACCGATTTGGTGAGTGCTTTTAGTTCCTA AATCCTTATCATATGTAATATAGGAATTCAGATCTATTGTATTCGAGGGTTACTGTAGTCAAGTTTTGCATTTCCGTAAC TTGAACTTTCAGAAGCTATATTCACTTCTGGAAAGTTCAAGTTCCGGAAGTAAATTTGTTATGCTTCCGGAACACAACCC GAAGTGAAAATAGCTTCCGTGCAAAACTTGACTGCAGGGAGTGCAGGTACCAATGGCTGTGGTGAATCCAAATCCACAAC CGGAAGTGAATCTTACCCTTTGCTTCATTGCACATAATTTCTTTCCAGGTTGAACTTCAAGGAAGCGGTAGTTGATGAAG ACGCTGATCTGTTCAAAAAACATCATGGAATAACCATGTACCAGAACTTGGGAAAAGGATCCGAAAATGAACCAAGTTTT CAACAAGGCAATGATCGGTATCTGTGCAGTATTTATGAAAAAAGTAGTTGAAATCTATACTGGATTTGAGGGAATATCAA CATTGGTTGATGTTGGAGGTGGAAATGGACAATATCTCAAGATGATCATCTCCAAGTACCCTTTGATCAAGGGAATTAAT TTTGATCTGCCTCAAGTGATTGAAAATACACCATTGCTTCCAGGTACCCTGCTATATAATATAATGTTTCATCAAATATC AACCTGTCAAATTATATAAACAATTAAGCATAGTTCTATATTCCTGTCAAATTCTTGTTAAGGGATTGAGCATGTTGGAG GAGATATGTTTGCAAGTGTTCCACAGGGTGATGCAATAATACTAAAGGTAAGTTTTTGGCTACTTGATAGATTTTATTAT AATGTGCTAAGTCTAATCACTAATGTTTTCTGATCTTGTTGACATGACTGTAGTCTGTACTCCACAATTGGTCAGATGAA AAATCTGTAGAAAATTTAAGCAATTGTCACAAAGCATTGTCACATAATGGGAAGGTGATTGTTGTGGAGTTAGTGTTGCC AGAAGAACCAGAACCAACTCAAGAATCCCGAACCATTTCTAGTATCGACAACATCATGTTTATCACAGCTGGTGGAAAGG AAAGAACTGAGAAAGAGTTTGAGAATCTTTGGCAAACTCTCTGGATTTTCTAAAGGCTTAATACATCAGAAGGCCCCTGA AATTGTAAAGGGAATCAATTACAGGGCCTGAAAAATTTTCGCATCAAATTGGGTCCCTATAATTTATTTTTTAATCCAAT TAAGGACAAAGTGGGTCAGCTGATGATGTGTCTTAATTTTTTCACTCTCACCTTTTCCACGTGGCTTTTTTATTTTTTTT AAATCTGAATAATGCCACATGTTATGATTAATTGAAAATCATTATCAATTCCTAATTAAATCA
CDS sequence (LotjaGi5g1v0279500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCAAGTTTTCAACAAGGCAATGATCGGTATCTGTGCAGTATTTATGAAAAAAGTAGTTGAAATCTATACTGGATT TGAGGGAATATCAACATTGGTTGATGTTGGAGGTGGAAATGGACAATATCTCAAGATGATCATCTCCAAGTACCCTTTGA TCAAGGGAATTAATTTTGATCTGCCTCAAGTGATTGAAAATACACCATTGCTTCCAGGGATTGAGCATGTTGGAGGAGAT ATGTTTGCAAGTGTTCCACAGGGTGATGCAATAATACTAAAGTCTGTACTCCACAATTGGTCAGATGAAAAATCTGTAGA AAATTTAAGCAATTGTCACAAAGCATTGTCACATAATGGGAAGGTGATTGTTGTGGAGTTAGTGTTGCCAGAAGAACCAG AACCAACTCAAGAATCCCGAACCATTTCTAGTATCGACAACATCATGTTTATCACAGCTGGTGGAAAGGAAAGAACTGAG AAAGAGTTTGAGAATCTTTGGCAAACTCTCTGGATTTTCTAA
Protein sequence (LotjaGi5g1v0279500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNQVFNKAMIGICAVFMKKVVEIYTGFEGISTLVDVGGGNGQYLKMIISKYPLIKGINFDLPQVIENTPLLPGIEHVGGD MFASVPQGDAIILKSVLHNWSDEKSVENLSNCHKALSHNGKVIVVELVLPEEPEPTQESRTISSIDNIMFITAGGKERTE KEFENLWQTLWIF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 167 | 167 | 1.9E-85 | – | |
| PANTHER | 1 | 167 | 167 | 1.9E-85 | – | |
| ProSiteProfiles | 1 | 173 | 173 | 50.396 | ||
| Gene3D | 2 | 168 | 167 | 1.6E-72 | – | |
| Pfam | 2 | 167 | 166 | 8.0E-52 | ||
| SUPERFAMILY | 2 | 167 | 166 | 1.17E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. |
Expression pattern of LotjaGi5g1v0279500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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