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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0280400 |
| Transcript ID | LotjaGi5g1v0280400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor, putative; TAIR: AT2G47270.1 transcription factor UPBEAT protein; Swiss-Prot: sp|O22901|BH151_ARATH Transcription factor UPBEAT1; TrEMBL-Plants: tr|A0A1J7HI82|A0A1J7HI82_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0280400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59545317..59549605) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATGTTTGTCAGATCCCATATAATCTGCAAGTACAATGTATAGTCATGATATTATTTAAGAAGATGATTCTTTACA AAACTCATGTATCAATTCAATGGAAAAACATGGTTCATGAATGTCAGAGAAGTTTATCTACCTTATCCCAACACTAGGAT CAGAATTGTCCACTTTTTGTTCACACAAGCATTGACAAATAACAATCCAATGATACTTTATGTTTTTTTAGTGTCCCTGT AACATGGTTTCCTCTCAAGCAGCACGGACTTAGTATAATGAACTTTAGAAATTTGTATATGTGGATGGAATTCCACGTTT TTTGAGCTGTAAGGAGGGTGGAAGGAGCCAACTGAAATTTCTTGGTTTGAAACAAATGTATTCTCCACTGAGTCAATCAT ATTTGAGTCTGGTAGAACCATTATGGACGATAAAATTTTCATATCAAGTATATAACGCAACTACATGCACAAATACTCGA ACCAGAAACCTCTTTCTAAGCTATAACAACTCAATGTTAATTAATCTACACGTTTGGTGGTGTGAGTCAATTCAAATACA AATGCATTGAATATGGAAAGTGATAGGGGAATAATCCAGGGTGGTCTTATTAGATGGTGGTGTGTGTGATGAATTGAAAG GTGGTGGTGGTTTAGAGAGTGAAGAAGAATCATGTGGATACATGTGCATTGGGGTTGGAGAACATGCCCAAAGCAACAAG CAAAACACTTTGGTACACCTGTCTCTCTCCCATTCCCTTGGAAGCCTCCTATTAAAATTCACAATGGTCCCCACCTTGTA ATCCTTAAGCTTATTCTGAATTATCCTTAATCCTTTATACATACCATATAAATGTTCTCTTGTGGTGTGTCATTTCTGCT ATATAGCTCTTGCATTGGAACCTCTATTCCAAAATTGAGAGCTTCATTCATTGGTGATAAATTTGAAAACTTTTTTCATT TTGAGTCATGGGAATTTCTTCACATCCTTCTTTTGTTCCCCTCTCTTTGAAGGATCTGCTTCAGGGAACTGAAGAAAGCA GAAACCCCTCATATGGGTATCTGTGGAGCAAACTCTTGGCCGCCAAAAAAAGCGCCAAGAGTAGGAGGCCGCGAGGGATT TTAATGAAGAGGAGGAGAGGCGGTAACAGAAGAGGAACCGTCGCTATCCAGAAACGCGTGAGGACATTGAAGAGGCTTGT ACCAAACAGTGATTCCATGGGGTTGGATGGGCTATTCAGAGAAACTGCTGATTACATATTGGCTTTGCAAACGAGAGTAA GAGTGATGCAGGTTATGGTTGATGTATTGACAGGGTATGATGATTGATTGATTCAATTGTAAAGACTAAAGACACTTTAT ATTATTTCTTCCTGGTCTATAGTTAACAGAGAGATTGGTTTTGGATGTTCAGTACATGTTTATTTTCATATCATGTAGGT TTAGATCAGTTTTATTTATTTTTCTTGTGTCAAAGAAGATTCATTAGTACTGGTTTGTTGCAATTTTTTGTTATGAATCA AGAATCATATATTTATTTCTTGTATTTGCCAATAACTCAATTGAGTTAGTAGTGGTACTTATTTTTTAAAACAAATTAAG CTGGTATTGTTTGCAATTAACAGAATTGTGGCAGGGGAAAATGAACAATTTAGTCTCAACCATTAGTGTAAACTATAAAC AGTTTTATAATAAGTATAGAAAGTGAAATCTAAAGAAATAAAAAAAGTTCTTTCAGGTGTAGCCATGTAAAAGATTGGAT ATCTCATGTCCATGACCACTGAGATGTAATTAACAGTCAATTGTAAGGAACACAGGAGAATAGTACACCAGAGAAGAATT GTACAATTTCTATTGAGTAGAAAGCTGGATCAGTATTATTTCTATATGTGTTTCTTGCAAAGAAAAGAACTCAGCTATCC AATAATTAAGATGTATAGCAGCAAGAACAATTCAGCATAAAGAAGAGATAATTCATAATTCAGAGGAGAAGAGTGAAGGT CTCCCCAAATAATCAACACCCTCTCACAAGCTTACTCTAGCCTCTTAAGTCTAACTTCTCCATGCGTAATCCTTGAGGTG ACAATTGGTTATTTTCTCCCTTGTGCTTCTTCTCACTTTCTGATTGCCAGCACCATGTGCCACATGGGCTATTTCTCTAA CAGCATTTTTCTGCTTCTTGCTTTTTTCCTCTTATTCCTTGACCCTTTTGCCTTCATAACAATTCCTCCCCCATTAAAAT CAACCTTGAGCTTGTCCTCAAGGTTGAAGTTAGGATACGCCTGTTTGAGGTCATGAGCTTCCTCCCAAGTTGCCTCATTG GAAGGCACAACCTTCCTAGTGGATCAAAACCTGCGAAATTTTCTGTGAATGATAGTCCTGGTTTGAAGAATTGATTGAGG GCTAAAATTGCATAAAACTAGCACAAGTCAACAAGAGTCACTTTTATAATTTTTTAATAGTAAATGGAAAAAACTGAAAA AGTAATGTGTAAAACTATTTTGTAAAACAATTTTTGAAAACAATTTTTCAGAACAAGAAATGAAAAAAACTTGTTTGATA ATATTATTTCAAGAACAGTTTTAGAAATAAAAAAACAAAAATACTTGTTTGATAAACTTGTTCTAAAAACATTATTTAGA GGAAAAAAAATCAAAAAACTTGTTTGGTTTTATGTTTTATTTATTTATTTTATGAAACTTAAAACCTTCCTTCCAACAAC AAAATTGCACCAAGTGCTACAGGGACTATTATGGAGAAACCCACAGCCTTACCATTGAAACAAGAAGCAAGTCTTGGTTA TATGTTAAATATCTCTTGTAATTCTTCACGACTCTTCTTTTTTTGGTACAACTTCTTCACGACTCTATGTCAACATTAGT GCATAACAAAGCAATTTAATTAGCATTGTGCACAAGTGTTCCACAAAGATCATGTGATCATTTTTTTTTTTGAAGAGGAA AGTGAGAAGGATAAGTCATAAGACCTGCTGTGCATTGATTCATGCTCAGCAAAAATCAAATGAAGGAAAGGGACCTCAGA GTGGAACTATGGGGAGTCAGACAGAAAACAAAGATTAAAAAGATAGCATAAATGAGACTCTCTGGTTCAGCAAATGGGAC AAGAAAAATCATCTTCCTCCTCCAATTTATTTTTCCTTTTGACAGAGAAGATTATAGAACTTCATCCTTCATCATTTCCC ACCTCAACCTTGGCAGCTGCATAAAAACCCTCATGAGTTTCACTACAAACCATTTTCCCTCTTCCAAGAACCAACTCTAT TTTTTTTTTGATAAGCTAAAATGTTATATATATAAAAGGGTACTAGGGGTACCCCAACCCTATCCAAAGAAAGAGAAAAA ACCAGCTAGAGAAAACCAGCAAAAATACAAAAGCTGCTGATTATGCAGCAAAGAACTACAACTGCAACGACAACTATTCC AAGGGAAATACCTAGCTAAACTAGCCAAGAATCCACCAAACTACTACAGACCCTGCAAGTACTAAACCAAAGAACCCAAT TTAAAAGATCGAATGCAGACTCAACACTAGGCCTAACAACAAAGCTCCCACCTAAAACTTTAAATTTCAGCACCAAATAC AAAACACAGCTAAAGAAAATTGAGACAATACTCTGGTTGTGCACTCCATTCATAGGTGGTAACTCGAAAGCTCTTAGAAC TTGCAGATAGCCAATTCCAAGCCCTTAATTGAGCAAGGTCGAAGACCTTTGCTGCATCCTTGTTGCCATCTTTAAAAACA ATTTGGTTTCGATGTAACCACAACGTCCAAGAACCAACTCTATCTGTTCTGCACAGAACCTTCCACCACCAAAACAGAGC CACAACCGCCCCCCATCACAGGCTTAGACCAGTACCCGTCTACCTCTCATGGCAGCCCCTTTCCCAATCTTCACTGAATC GCCCATTCACCAGAAACCACCATAGGAAAACCAGACCAGAGAGCCGTTTTCCCCAAATTGATAAGCCACCTGTTACTCAT GATGAAACCAGTGACCAGACCCCTCTTTTCTGCGTCGGAAACCTCAGCACCACTGTCCGATCCACCTAGCCCCCTTCGCT CTCTTCGCCGCCGTGCGCCAGGGTTGTTGCCACCTCCTGCTAGCCTCCCTTGGACCCTCGTTTCTCCCTCAGAGCGCAAG CCACAGTGAACGGCCGCCAGACGCAGGAAGAGAGCGACGAAGAGGAAGAGCGTGGTTCTTTGCGTGTTTTAAAACTCTGA TTCCTTTTAATTACGATCATGCCATTAATGAAAAACAAGAAAACACATT
CDS sequence (LotjaGi5g1v0280400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAATTTCTTCACATCCTTCTTTTGTTCCCCTCTCTTTGAAGGATCTGCTTCAGGGAACTGAAGAAAGCAGAAACCC CTCATATGGGTATCTGTGGAGCAAACTCTTGGCCGCCAAAAAAAGCGCCAAGAGTAGGAGGCCGCGAGGGATTTTAATGA AGAGGAGGAGAGGCGGTAACAGAAGAGGAACCGTCGCTATCCAGAAACGCGTGAGGACATTGAAGAGGCTTGTACCAAAC AGTGATTCCATGGGGTTGGATGGGCTATTCAGAGAAACTGCTGATTACATATTGGCTTTGCAAACGAGAGTAAGAGTGAT GCAGGTTATGGTTGATGTATTGACAGGGTATGATGATTGA
Protein sequence (LotjaGi5g1v0280400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGISSHPSFVPLSLKDLLQGTEESRNPSYGYLWSKLLAAKKSAKSRRPRGILMKRRRGGNRRGTVAIQKRVRTLKRLVPN SDSMGLDGLFRETADYILALQTRVRVMQVMVDVLTGYDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 40 | 116 | 77 | 8.7E-30 | – | |
| PANTHER | 40 | 116 | 77 | 8.7E-30 | – | |
| MobiDBLite | 41 | 62 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0280400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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