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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0282800 |
| Transcript ID | LotjaGi5g1v0282800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyprotein; TAIR: AT1G21540.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|Q02968|MVP_CAMVE Movement protein; TrEMBL-Plants: tr|I3S3X5|I3S3X5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0282800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59915136..59919813) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTATTGTTGAAATTCACCCGTGTATGTCCATTGATTGAAGAATCAGTCTCTTGAAACTAAAATATTTCTTAGACAT GGCAAATCTTACATTGAATCAACATGCCAACAATTCTGAAGAAAATGATTCAAACTTAGAACAAAAGCTTCAAAATTGGT CAATTCCAAAGATTAGAACAAACCAAGTTTATAAAACTTCAATCTTTGAATTCAACCCTGATTATGAGATCAAAACAGTG GAAAAATCTTTTGCAGTCCAAGGTCCATACCAGAGGATTTCCATTTTGGATTCACGCATAGTGAATCAACATGTGAGAAA ATATCGTGATCTACACATTGGATTAGTTCAACTAGCTGTAAAACCTCTTACCAGATTAAGGTATTGTGACCTCCCTATCT TAATCTGCTTAAGAGATAAAAGGATGTTGAGATTTCACGAATCTGTGTTAGCAGTTCTTGAATGCAATATTCAGAATGGA CCAGCATATTTCAATTGTTTTCCTAGCTATCCAGTTTGTCTCAGAGACCCTCATGTTACAACATGTGTAGATTTAGATAT AAAAATTCCAAATGAAATGTTCATTGATGGAATTCCACCGGTTAGTATCATGTACAGATTTTGTTATAAAGTCACTGACA ACCTCTCTGGCATAAAGGCCGTAAGAGATTACACAGTGAATGAAACTGAAGTAACAGAAATCAATGCTGAAAACTCTTCA AGAATCACCCGGAAGATACTCAAACATGATGAAATCACATATCCACAAGAATGGCTGCAAGGATGTTCTTCACAACCTGC ACCTTGAAAATGTTCATTGCCATTGGTCAAAAACTATTCAAGGATATCATTATGGCTTAAGAATCTCTGTATTGCATAAC TTTAAATTGTGAGAATTCACTGGTGGCACAACAAGTTTGGTGAGGCATCGTATGTTATAGTTAGTCTTCACTTGCGAGCA TATGCAGATGCTGCACTTGTGACTTTTCTTTTGGTACATCGGAAAATAACTGCACTTGTGACTTGTGAGAAAAGAACTTT CCAAATCAAAGTTAGACTCTGTAGAAATCTCTTGTTTGCATAATGTCGGAAGTTGTCACTAATTGTCTTTGTTTCTTATG ATTTCTCTCTTGTAATGAAAAATAGTTAATGTTGTTTCTAGTTTTCTACTTGTTTTTGTATCTTTAGTCTCTTATGATGC TCTCTTTTAATTTGTATTGAATACTATAATTATATAATATTGGAAGGGAATTGAGTTGGATTTGGGCCATGGTATTTGGT TTTCATTCTGATTTGCTTGTACTTGCAAATTCGTTGCATTTATTCATTCATAGCATTATTATTTCTGAAAACTATCACTA GTATGATGGAGGTGGCTAATTTGTCCGGCGGAAGGAGGAGGATTGAGTACCAAGAGAAGGTGAGAAGAGGTGGCTATTGT GTCGGGCGCTGAGCACAAGTCACAGTGGAGACCAGGGCGCAACTAAGCGTTGAAGAACACAACATGATTGAGGTTGCGAT TCGACAATGGAAGGTGGTCCATTTACAAGAACACAATGTATAGAACAATGTCATTATACAACACAATTTAAAAATCAAAG AGGTAGAATTAACTAACCTGTAAAGAGTGAGTGTAGCGGGCGAGACAGTGGCAAGGGCGAGAAGGAGGCAGAGGGCGTAG TGGCGACAAGAGGATGGATCCGTGACAGGAGGGGGCACGATGGCGACGATAGGAGAAGGGAGAACTATGGGTGACGAAAT TGGAATCGAAGGAGGGTATGCTCACGACGATAGTGCAAGAGACACAACAATAATAAGATATGCTCATAGGGAGGGATAGG GCCTGCTCGGGGACGAGAGAGTCACTTCCTAGTTAATACCGTTTTCTTAATTAATTATTTGCATTGAGTACGGCCTCGAT CAGAGGGGGACGAAATTAGAGAGGGGGAGGGCATGACGCTTCATCAACAACAACGACGAGTTTCATTGAGGAGGATGGTT TTGCGGAGACTAGCAGATTTAGGGTTATGGAGAGAGACAACTAGGATTCAAGGAGTGGGGAATGCAGATGAAGACAATCT TTGAAATTTCATTCAATAGACGCTATTCAGCGTTGGTCATGCTGAAATTAATCTTTAAATTACAAATTCTATATTTTAAC AATTTGTGTCGGCTAAACCAACGCTAAGTAATCAAAATTAGCGTCACATTGAGAACAACACAATATATAACGCTAAATTA TCCCTTTCTTGTAGGCTGTAGCGATAAAAATCAATCCAAAAACTTTTAATTAACAACCATAAGATATATTAATAAATAAA AAATGGACACTATTTGAACACAACCACAACTGATCGAGTTTTAGGGCAGGGATAGATGACACCAAGTAGTTTAGGGGGAA AAGGGAAAATTAACTTTTTCACACTTGTCCACCTCCACTTTGAGAGGTGGACAGGTGGGAAAAGAAAGAGAATTGATGTG ATTCACCAATCACACCATACATAATACCAAGTAGCTTAATGGGGGTGTAGAAATTCAATCCGGTTTTATAAACCACAAAC AACATTTTATATAAAAGAAAACAAAATTCACATGTCTCATTCCTATCATATCCCAATACTTCACATCTCTAGTTTGTCTC CCTTATCTGAAATGAGATAAGTAAGGTAATGTGATAGAAATAGAAGTGAGAAATAAAAAGAAAAAGATAAATGAAAATGA AATGAAAAAGAATATGAAATGTGATAACTCAATAATAAATACACTATCTAGATGGATCTAGGCTTTTGACCATAAGCTAA GAAATCATTTTTTAAAACATGGAGAATGGTTGTTGGCATAATGTGATTTCGAAACTGCCTATGACTATCCTTTGTGGGGA GATATTGGCGAATAAAAGAGTGTTAAATATGTTTTTGATCCCTCTAATTTTATCATTGGTTGGAATAGTTTTTTAACCAA CTTATCTTAAATATTATTGGTTTCCCTAAAAATAAGATGATTTAACTAAAAAAAAAAATTCTAGAGTTATTTATACAAGT CCAAAAGAGTTTACTTTAGAACAAATAATAGGAGGCACCAATTTTTAAATCAATTACCCACTATTAATAATCATTGATTC AATATCTACGATTATAATCATTATATCAACAACAATTTATAATAGATCACAAAAAATGTCCACTATATAACTTTCCTCAC TTTGTTTTAGAGTTTTTCTCTATGTTTTCCCCCTCTTTGCATTAATAAAGTATGTGAAAGTAGGTCCACCCTAGACCCTA GTCTTTATCTTTGGAGTAATATATCATTTTTATAAACTTTTTTTGACACAACTCCAAAACGGACTTGAAAGGCATTGAAG TCCGCAAAATTCAATAAATATATTCATAGAGGAAGACAAACCTGTATATTATTAACCAGCCCCTCTTGCTTTCTCAAGCT TTACATCAAATCAAAGTCTCTTGTATTCCTTTAGTAAGTCCTTTCAACCTATCTCCATTAGTATTACTCTATCATAAGCA TTTTTCCTCTCAATATTTCATCCTATCTTTTATTTTTATTGTTGAAAATTCACCCCTGCATGTTCACTATTTGAAGAATT TATCTCTTGAAACCAAAATATTTCTAAGATATGTCATATCTTACATTGAACCAACATGCCAACAATTCTGAAGAAATTGA TTCAAACTTAGAACAAAAGCTTCAAAATTGGTCAATTCCAAAGATCAAAACAAACCAAGTTTATAAAATTCCAATCTTTG AATTCAACCCTGATTATGAGATCAAAACAGTGGAAAAATCTTTTGCAGTCCAAGGTCCATACCAGACTATTTCCATTTTG GACTCACGCATAGTGAATCAACATGTGAGAAAATATGGTTCTCTGCACTTTGGATTAGTTCAAGTAGCTGTGAAACCTCT TACCAGATTAAGGTGCGACCTCCCTATCTTAATCTGCTTAAGAGACAAACGACATTTGAAATTTTGGAACACTGTCAGAG CAGTTCTTGAATCTGATATTCAGAATGGACCAGCATATTTCAATTGTTATCCTAGCTATCCAGTTTCTCTTAGAGATCCT CATGTTACAAAATGTTTAGACTTGGATGTAAAAATTCCAAATGAAATGTTCGTTGATGGAGCTCCACCACCGGTTAGTAT CATGTACAGATTTTGTTATAAAGTCACTGACAACCTCCGTGGTGTAAAGGCCAAAAGAAGTAACACAGTGAATGAAACTG ATGTAATAGAAACCAATATTGCTCAAAACTCTTCAGAAATAACCCGGATACTCAAACATGATCGAATAGCATATCCAGAA GAATGGCTCCAAGGACGTTCATCCCAAATCCCAACAGATTAATTAGCAGGAGAAAACAACTGTTCCTGACCAAATTAAGT TAAGCTCTGTGTTAACATTTCTTGTTTGGATGATGTTGGAAGTTATTTCTAATTGTCTTTCGTTTTTATAATGTTCTCTC TTGTAATGATAAATAGTGGATGTGTCTTTGTATTTTAAGTTTTTTATGATGCTCTCTTAATTTGTAATACTCCTATTAAT ATTGAATGATATTGGAAGTTGCTTTCTACTTAAGTTTCGTTTCTTATGATGCTATGTCCTTTAACATTTTATGATGTCTT TAATTACTTGAGTTTTTTTTTTATCTAGATTGTCAAGA
CDS sequence (LotjaGi5g1v0282800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAATCTTACATTGAATCAACATGCCAACAATTCTGAAGAAAATGATTCAAACTTAGAACAAAAGCTTCAAAATTG GTCAATTCCAAAGATTAGAACAAACCAAGTTTATAAAACTTCAATCTTTGAATTCAACCCTGATTATGAGATCAAAACAG TGGAAAAATCTTTTGCAGTCCAAGGTCCATACCAGACTATTTCCATTTTGGACTCACGCATAGTGAATCAACATGTGAGA AAATATGGTTCTCTGCACTTTGGATTAGTTCAAGTAGCTGTGAAACCTCTTACCAGATTAAGGTGCGACCTCCCTATCTT AATCTGCTTAAGAGACAAACGACATTTGAAATTTTGGAACACTGTCAGAGCAGTTCTTGAATCTGATATTCAGAATGGAC CAGCATATTTCAATTGTTATCCTAGCTATCCAGTTTCTCTTAGAGATCCTCATGTTACAAAATGTTTAGACTTGGATGTA AAAATTCCAAATGAAATGTTCGTTGATGGAGCTCCACCACCGGTTAGTATCATGTACAGATTTTGTTATAAAGTCACTGA CAACCTCCGTGGTGTAAAGGCCAAAAGAAGTAACACAGTGAATGAAACTGATGTAATAGAAACCAATATTGCTCAAAACT CTTCAGAAATAACCCGGATACTCAAACATGATCGAATAGCATATCCAGAAGAATGGCTCCAAGGACGTTCATCCCAAATC CCAACAGATTAA
Protein sequence (LotjaGi5g1v0282800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANLTLNQHANNSEENDSNLEQKLQNWSIPKIRTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQTISILDSRIVNQHVR KYGSLHFGLVQVAVKPLTRLRCDLPILICLRDKRHLKFWNTVRAVLESDIQNGPAYFNCYPSYPVSLRDPHVTKCLDLDV KIPNEMFVDGAPPPVSIMYRFCYKVTDNLRGVKAKRSNTVNETDVIETNIAQNSSEITRILKHDRIAYPEEWLQGRSSQI PTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 195 | 176 | 1.2E-20 | – | |
| PANTHER | 20 | 195 | 176 | 1.2E-20 | – | |
| Pfam | 67 | 198 | 132 | 5.3E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0282800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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