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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0288100 |
| Transcript ID | LotjaGi5g1v0288100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Low affinity potassium transport system protein; TAIR: AT1G22790.1 Low affinity potassium transport system protein; Swiss-Prot: sp|Q9WUJ3|MYOME_RAT Myomegalin; TrEMBL-Plants: tr|I1NH48|I1NH48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0288100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60493667..60499342) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAATGAAGAAATTCTTTAACCAATCTTCTAACTTTACTCAATTAAAAAACAAAAATTAAAAATGGGGTCACATCAC TATCATACGCCGTGTGAGTCATTATCCTATCCTCCTTTTAAATAATTGAAAAACACAAGTAAAATTAACACTGAACCGTT TTTTCCCTTTCAATTCAATTCCCTTTCCTCGCCGTGTTTTCCATCTGTGGCCACCGCGCAACCGCACCTCGCCGCCGATC TACGCGCCGGCAACCTTCCTTCTTCGTTCTCCGGTACCGTTCACTACTGTAATCTCACTCCTCCTTCTTCGATCTAAGAT TTTCCCGTTTGTTTCCCGAGAAAGTGACGGAAAACCGACACTCCCAAATCTCGCTTCTCTCCTCTGTTCGATTCGACTGT GATTTCAGTGTTTCAGGGATTCGTTCGATATAGTGAGTTTATGCTTTCATTTCTTCTATAGAACTTGCTTCTGTGTGAAT AATTTTGATGATTGATTTCTGCAAAAACTCAATTACTGTGTAGATTTACCAGGTTTTTTGAGCATCTAGAAATTTCAGGA AGCATTGAATTGGTTTTGTCTTGTGAGATTATCCTGTGAAATCTGCTTTTGTTATCTTACCAACTTTGAATTTGTTCAAT TGAAAAGGGGTAAAATGTTGTTGTGATGGAAGATTTTGAAACTATTGGAAAATCATTCTGATTTCTGATTGATTTTGGTT GTTAAGGGTGAAACTTTGAAGTTATTTATGGTGGGCCGATGAGAAGAACTGATGTTATTGGCAGTAGAGGGAGGAGGATT CTTCTCTGCTTCGGCGTCGGGGTATAGTAAGGGCCTGAGCCTTCTGCTATTGGGTCAGAGGGATGAGGATAAACCCATGA GAGTTGCGCCGTGGAACCAGTACCAGTTGGTGGACCAAGAATCTGACCCTGACCCTCAGCTCCAGCTGGCTTCAACAAAG AACCGCCTCTCCCGCGGGTGTGCTTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCTCGACACTCCGTCTCCGCTTAA AGTGGGCCCTGCCCAGCAGCCTGATGTCTCTCCAGGGCCTCTGGTTCCCACCAAGGGGAAGGATCCTTCTGGTAATGTAG ATGGTGGTGATGATGATAATAGAAGAAAGGTCACGCTTAAGAGTAGTATAAAAAGGCCACAAGTTAATAAATCGGTTCCT GCTGAGGCTGCTAATGAACATGAACCATCAGGCGGACGGGGGGTTCATAATGCCGGTGGGCAAGCCGAGAGAAGGAAAGT GCAGTGGACAGATTCTTGTGGTAGTGAGCTTGTTGAAATACGAGAATTTGAGCCCAGGTATGAACTTGTGGTAGCTAATG AACATGAATGTTTTATTTTGAAATCAGCTATTATGACAGGATGAATCTTTCTCTGTTCAATTGCAATATGTTAACAGGAC TCTGGAGCTCCTGATACTTTATGTTGTGTTTTTGACAAAAGTGAATCAGATATGCTAGGATGGCCTTTTTATTTTCCCCT TCATTATTATAAATAACCCAAATCTATGTTGTGTCATGTGTGGAACTTGTAGAAACTGTAGAAAGGTTTGTTTTAAAGTG TGAGCTAGAAAACACTTGGAAAATCAATTGTTACTCAAATGATTAGTAGTAAGAATGAAATAGTCAGAATAAGTGGTAAA ATTGTAAGTTAGGGGTCCTATATTTCTAGTTTATAGAATTCTAGCGTCAAGCTTGGGATAATTTCTAAATTCTAATGAGT AGGAATCAGGATATTTAACGTTTTCAATATTTGTTAGATCTTTGTTCTTGACGTCTGTTGGCCACAATAATCATTTGTGT CAATTTAGTGATAGTCTTTCCTTAAACATGACTCGGTTCTTAAATAGGTATATATGTTTTCTTGTAATTCTCTATGAAGA TTAAGTGCACCTTTTAAGTCCTCGATGTCTTTCATTTTTAGATGCAAAGTGTTTGCAACACTTTTTTCTTAACACACTTT CTATGATTCGTCTAGTTTTTAATAACTCAATGTATTTGCATCTTTAATTGATCACTTTTCATAAATTGTGTTGACTTTTT ACTGCTTTTTATTCTTAGAAGATGCTTATGGTTACTTTTGAATGACTTATTTTTACCTTGCCAATTTGGATCAATTTCTT TCGTCGTTGGAGGGTTTTGATGGAATAAATAGATGGTTCTATCATGACATGCCTGTTTTCTTAGTCCTTAAATAGAGAGA AATGATAAATATTCTAGGAGTTTATGCCTGTCTTGCACTTGCTCTCAATAGTGTTTGGTTAATGGCTACTGTAATGTGGT TTCTCTATATGACTTGCTCTCAGTGGTGTTTGGTTAATGGCTGTTGTGATGTGGTTTCTCTATATGATGTACACTGATTT GGAACTTGGAAGGATTTGTTATGTTGATTTGTTTTTCTCCATTTGTTTGATTTTTCTTTTTAACCTTCTATGAAGGGATG CCTTACCCTCTATAATAGTTCTTATTCCACGATGATCCAATTTACTCTTGTACTCAAGAAATTGAAAGAGATTCATAATT TTTCCTTTTTTTGGGGGTGTGCCATTACTTAATTTGTGCGATTTTTATCTCTTGTACTTTGTTGATCTATTCAGAGCTTG ATATTATCAAGTATCATTAACAGAGCTGGTTCCATTCTCCTTATTTGGAGCTTTCTGTGGCTAGGCTGCACATAATGTGT ATACGGTGTTGCACGATTTTCTTATGATAGTTATTTCTTTAGCTTATAAGCCCGTGTTACTTTTATGATATTTTTGAGAT TTCCACCAAATACATTCACCAACATTACATTTTTGCCATATCAAAGAAAACAATGGAGGAAACATTTTGGTAGTGGGTAA TATATTTTTTACTCTTTGGGTAATTTGTAGGCATGTGTACTACTTTGGCATGAGATGTAAATAGTTCGCATCTTGTTTGG GGAGATTAACTTTCGATGTGGTGCTGCAATGAAACTTTTATTTAGAGTTTTCCATACTTGACACTGAATGTTGAAAAAAG TGAATGGAGTCATATTAGTGTTTTGGTAGTATATGCTTGTATTAGTGTATAAGATCTTTTGTATATCTTGTAAGTTGTGA CAGTAGTACACTATTTATTTTTGGTGAAGAACAGCAATTCACTATTGAATCTAGATTTCAGCTACAGAGTTTTGTAAGGA GGTGGTCCTAAGAGCATCTCCAATGGTAGTATCTATTGTTAAATACATACTCATATGAGTATCTATTACCATTGAAGTAC ATATTCAATTCCAACATGGCAAATATGAGTATGTGGGAATAGATACTCCACATTAGACTTGAAAAATGAGCTTGTATTTA TTACAAGCACTTACAATTAATATAATTGGAGATAAATAATAAAATATACAAATGTGATGTTGATGGTGGGATCCAGTATA GAAACTTTTAAGAGTTGTTGGGTTGGAGTAAAAAGTTAGTAAAGTGGTGTGGATGATGTGGCACTATGGAGAATTGTAAA AAATGAAGTGTAGATATTTTAGTGAGTATGATGGATGTAGATGTTCTAAGTTCAGTGCACGCAATATGAGACCATGGCAA GTTTTACTTGGGAATGATGGGTTTTTGGCACTGTTTTTCTTTGACAGAAAAGGCTGCAATTTTGTATATCATAACTTTTG TAAAGTGATTTTTTATGATCCATAGTTTCTTGATAAACATACTGAGGATTTTTGCAATGTTGTGTGACTGTTGAAAAGCA CAGTAAGATCCTTTCCTAATTTTAACCAAATGTTTTCAAACCTCTATTTTAATAGGTCTCTGAAACTTTTCAAATAGTAG GGACTCGATTGATGAGGACTTGAATTAATAAAAATTGGATGAACCTGTAGGGGCTAGAAAATTAGTTTCGGTCTCCCCTC CCCCCCAGTTAGGTACCAGACACAATACTGAGAAAAGTAGAATTTGTATTACTATAGTGTTGAATATACTGCTAGAACTG AGATGAATCCTCAGATCAGCTTGAAGGAAATACAGAAAAGTATGGAAAACCCTCAGGCGATTCTAAGGCTGCCTCTACCT CCCAAGCCTAACTGTTTCTGCCTACCCTTCCCTTCCTACGTTTCCCTTCTTATACGCACACTCTCTTCAACTCTACCCAC ATGGATCCACGCCCCTGCCTCCTCAGAAGGTGGTTAATCTGCTCACATGGATAGATCTGGTGCATCACACCTCTTCTTCC TGCTTTCATATACTCTAGTAGTATTGGGCCTATCACTAGCAATTGGGTCCGCAATAACCCCCCCCCCCCCCAATACTATT TAAGTATTAAGCATATTGTAGTGACAAGAAACCTTAAGATTAGATATATATTAGTATTTCTATTTATATCTTTATTATGC AAGAATATCATAAATGAGGCCTTACTGCAGTTAGTTTGCCAAGATCCTGTTTTGTATCACGTTTAGTTCACAACCATTTA TTTTATGTATTTTGCCACGATACCTTTTATTCTAGTCTGATGAGTGGGCTGTGCCTATGATGAATGTTCTTGACCTTCTT CCTTGTCATATTTCATTTTTTTGTTTTTAGTTTTCATGCTTTATTACCTACTTGTTCATTCTATAAAGTGGAATTTGTCA TTCAACTGCAGTGAAGGGGATGGATCAGATGATGATTTTGATAATGGAAGTGACAGAGCTTGTGCCTGTGCAATTATGTA AATTGGAGTTGCATTAAGATGATTGGGTGATTCAGCAGGACATTCACTGCTAACACAATCAATCACTCAGTTTGAGGCAA AAGGAGCAAAGATTTTTCAGTCCTATGGGCAGATATACTGCAACATCTTGCCTGAGTGGTTATTTGTGTCATTGCTTGCG GCGGCTTTAAGTTTTGCTCGAATCCCCCCCCCCCCCCCCAATATCAATTTATTGTATAATTCTTATCATGTGTGAATTCT TTGCCTTTGATTCATCATTTTTATGATACTTTATGTTCTTATTTATATGGATATGGGTTAACAAAGTTTTAGTTCTGTGC TCTGGCGTTATCTAGAAGCAAGATAATACAGATGTAAGATTTTGTAAAGAATCAGTGTGGTTGTCTGGTAACAAACTACA AGACTAGGATCTTCTGAGGTTTATCTATCTGTTGGAATTATAGAGAAAAACTCGTGGTGCAACTGTCTTCTTGGCTGTTG TGAGATTGTTTGGGATTGCTGGGTTACTGAGCAATAATAAGGGAGGGGAAATAACTTTTTGTTCGTTTGGTTCATGAGAA GAATGGAGGGATTTTATTTTAGTTACATGATTTGTTTTCCCTTCAAATCCTCCAATTTTGGAGCAGAGTTGAATGAAGTT AGAAGGGATTTTGGTTTTATTTCAGTCACGGGCTTTTGATTTCTTCCATTTTAGTCACATGATTTATTTTCCCTCCAAAC TCTCCAATTAGAGCAAATTTTCACCACTCCGGTATTGAACACTCAGTGTATCCCCTTCACAAATATTCAGTTTTTTTATT TAAAATTTAAAAATGGAAAATTAACCATTTATGGGACATGAGTAAATATGGCCAAAAGGAAAATGTACAGTACTAGTGTA GTATGTACTTCCCAATTGAAAAGATATTGCTCTAGAGGAAAATTTGCTGAATATCATTTACTCTTTTTTGTTGAAT
CDS sequence (LotjaGi5g1v0288100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTATTGGCAGTAGAGGGAGGAGGATTCTTCTCTGCTTCGGCGTCGGGGTATAGTAAGGGCCTGAGCCTTCTGCTATT GGGTCAGAGGGATGAGGATAAACCCATGAGAGTTGCGCCGTGGAACCAGTACCAGTTGGTGGACCAAGAATCTGACCCTG ACCCTCAGCTCCAGCTGGCTTCAACAAAGAACCGCCTCTCCCGCGGGTGTGCTTCCTTTGTTTGCTTTGGTCGCACTTCC GCAGGGCTCGACACTCCGTCTCCGCTTAAAGTGGGCCCTGCCCAGCAGCCTGATGTCTCTCCAGGGCCTCTGGTTCCCAC CAAGGGGAAGGATCCTTCTGGTAATGTAGATGGTGGTGATGATGATAATAGAAGAAAGGTCACGCTTAAGAGTAGTATAA AAAGGCCACAAGTTAATAAATCGGTTCCTGCTGAGGCTGCTAATGAACATGAACCATCAGGCGGACGGGGGGTTCATAAT GCCGGTGGGCAAGCCGAGAGAAGGAAAGTGCAGTGGACAGATTCTTGTGGTAGTGAGCTTGTTGAAATACGAGAATTTGA GCCCAGTGAAGGGGATGGATCAGATGATGATTTTGATAATGGAAGTGACAGAGCTTGTGCCTGTGCAATTATGTAA
Protein sequence (LotjaGi5g1v0288100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLAVEGGGFFSASASGYSKGLSLLLLGQRDEDKPMRVAPWNQYQLVDQESDPDPQLQLASTKNRLSRGCASFVCFGRTS AGLDTPSPLKVGPAQQPDVSPGPLVPTKGKDPSGNVDGGDDDNRRKVTLKSSIKRPQVNKSVPAEAANEHEPSGGRGVHN AGGQAERRKVQWTDSCGSELVEIREFEPSEGDGSDDDFDNGSDRACACAIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 211 | 211 | 8.9E-82 | – | |
| PANTHER | 1 | 211 | 211 | 8.9E-82 | ||
| MobiDBLite | 84 | 204 | 121 | - | – | |
| MobiDBLite | 114 | 129 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to light intensity | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus. |
Expression pattern of LotjaGi5g1v0288100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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