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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0295000 |
| Transcript ID | LotjaGi5g1v0295000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Membrane-associated kinase regulator-like protein, putative; TAIR: AT5G52900.1 membrane-associated kinase regulator; Swiss-Prot: sp|Q84JK8|MAKR6_ARATH Probable membrane-associated kinase regulator 6; TrEMBL-Plants: tr|I3S8A2|I3S8A2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0295000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61247564..61249131) extracted from Lotus japonicus Gifu genome v1.2.
TCATCTCTTAACTATGAGGTTGGGGTTCAATCATTGCTAATGAAAATTGAGCATAATTTTTTGTCGGCGATTACCGCTCA ATACAAGCACCCGCGGCAAGGGAATTATATACTATTGTTGTTGATACCATACTAAAAAAAATGCAGACCCATGACCAATA CTTGGAGAGAGATGGTATATTAAGGAGTGTGTGTGTGTTATACAAGTCAGAATATATGTTGAAATAAGAGGAGTTCCTTT GCTAGTAGCTAAAGCCTCTTTTATATACCCTTCTCTTACACCGTCAAATTTTCCAATTCTCTTACACAGACATGGAAACT TCTCAGCCTCTTTCTATTGAAAGTTTCTCTTATAGTTGGTTAGTGAACCTGAAGCCAACACTAGAAAGCCTAGATAGCTC CCTGAGAACTTCTCTTGATGCATATGATGAAGCTTCCTTCATTCAAATGGACCCAAGGATGCCACCCTCTAAAAGATTCT TCAAAAATTCACAAGATTGCAAATTTGACTTTCCAATTTCACAGTCCCCTCTTTCTCTTGTTCATGCTGATGAACTCTTC TCCAATGGTTACCTCACAACTCTTTTTGATGAATCTTTGAAGATGGAAGAATTTGAGACCTCAGACTCATCTTCACATGC TTCACAAAGTACTGTGCTTCCTGCAGGACACTCTAGATGCCCTTCCTTGAAAAGATGCAGAACATTATCAAGGACAGTAT ATCACAAATATCTGAATTTCTTGAAGTCTTTGAGTAGAAGATTAAGGGGTCACAAATCAGGTTCAAAAAAAACTGAAACT GTTGCTAAAAGAGGTGAAGCAGTGAGGAATAGGAGATACTATTCAGAAACATCTCCAAGAATCAGTGAAGCTTTCTCTGC TGATAATTGGAGAAAGTCTTGTGATTCTGAAAGCTCAATATATGAGGCTGTTCTCCATTGCAAAAGATCCTTTGGTATGT ATATACAAGTTTAATTTAATTAACATGGATATGAATTATGCTTCATCTGTTTCCTTCTCTTTAAAGAATTTTATAGATTT TCTGAAGCACTAACATTGACATTTTAACACTTTTTTTATGGCAGAGAGTGAGAGAGAATGAGTTAAGCATTGCTGCAAAA GGGGTGAAGGTGAAGATGAATTACAAGAGATTAAATTTGATCTACTGTTGCTGTAAATGTTTTCATACTTTGAGGGAAAG AAAGAAAATGCCACTTCAATGTTGTTGTGCCTAAGCTTTTTTCACTTGTTGTGACAGTTTTAACTTTTTTCAATTTGTGG TGTCATATGGTTCACTGTGGATTTAAATTAAATTAAAAGAAGAATAAGAAAGAAGAAAACAAGGAAATGAAAGAAGAACA ACAATCCCATGTGAGCTGAAGATGTATAAGGCCAAATAATTATAGGCCACTCAAAGGGAAATAACATGTGGTTGGTCTAT CATTATTCAAGTTATGCACTTAATTTGGTCCAAAAAAAGGAAAAGAAACAAAACTATGGAGTCAAATTTGGGAAAAAATG ATACAGTTGAAATTTTCTTTTGTCTGGTTAGTACGGGGAAGAACACTT
CDS sequence (LotjaGi5g1v0295000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACTTCTCAGCCTCTTTCTATTGAAAGTTTCTCTTATAGTTGGTTAGTGAACCTGAAGCCAACACTAGAAAGCCT AGATAGCTCCCTGAGAACTTCTCTTGATGCATATGATGAAGCTTCCTTCATTCAAATGGACCCAAGGATGCCACCCTCTA AAAGATTCTTCAAAAATTCACAAGATTGCAAATTTGACTTTCCAATTTCACAGTCCCCTCTTTCTCTTGTTCATGCTGAT GAACTCTTCTCCAATGGTTACCTCACAACTCTTTTTGATGAATCTTTGAAGATGGAAGAATTTGAGACCTCAGACTCATC TTCACATGCTTCACAAAGTACTGTGCTTCCTGCAGGACACTCTAGATGCCCTTCCTTGAAAAGATGCAGAACATTATCAA GGACAGTATATCACAAATATCTGAATTTCTTGAAGTCTTTGAGTAGAAGATTAAGGGGTCACAAATCAGGTTCAAAAAAA ACTGAAACTGTTGCTAAAAGAGGTGAAGCAGTGAGGAATAGGAGATACTATTCAGAAACATCTCCAAGAATCAGTGAAGC TTTCTCTGCTGATAATTGGAGAAAGTCTTGTGATTCTGAAAGCTCAATATATGAGGCTGTTCTCCATTGCAAAAGATCCT TTGAGAGTGAGAGAGAATGA
Protein sequence (LotjaGi5g1v0295000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METSQPLSIESFSYSWLVNLKPTLESLDSSLRTSLDAYDEASFIQMDPRMPPSKRFFKNSQDCKFDFPISQSPLSLVHAD ELFSNGYLTTLFDESLKMEEFETSDSSSHASQSTVLPAGHSRCPSLKRCRTLSRTVYHKYLNFLKSLSRRLRGHKSGSKK TETVAKRGEAVRNRRYYSETSPRISEAFSADNWRKSCDSESSIYEAVLHCKRSFESERE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 216 | 216 | 9.0E-106 | – | |
| PANTHER | 1 | 216 | 216 | 9.0E-106 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0295000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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