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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0295400 |
| Transcript ID | LotjaGi5g1v0295400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Membrane-associated kinase regulator, putative; TAIR: AT5G52870.1 membrane-associated kinase regulator; Swiss-Prot: sp|Q9FLX4|MAKR5_ARATH Probable membrane-associated kinase regulator 5; TrEMBL-Plants: tr|G7IDX6|G7IDX6_MEDTR Membrane-associated kinase regulator, putative; Found in the gene: LotjaGi5g1v0295400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61278512..61280578) extracted from Lotus japonicus Gifu genome v1.2.
ACGTTTCACTCCAAAAAGCAAAAGCTAACCCTCTGATTCCCGAAGTGAAAGCACCATATTCAATGCACACAAGCTCCATT AAACGAAGTGAAAAAGTGAAACAAATGAACCTCTCTTTCTCTCTCTTTATTTTTGTTCATTCACCAAACTGTTCCTATAA AACCCAAAACCAAACCCCACAACCAAACCACACTTTCATTTTCAACACTTCCTCCTCTTACCCTCTTTCTCTTCTACCAC CATGGATGCTCTCAACTTCTTAAAATTCTGGCGTAGCGCCACCGTAACAACCACCACCACCTCCACCTCCACCTCCACCG TAGCTCCTCATCTTGTTGTCGAAACAGACAGTGAGTCCGACGAAGAAGACTCGTTCTTCGACTTGGAGCTCACGGTACGT GATTACGACAACAAAGAAAACAACAACAACAACAAAAGTCTCTGTTCCAATGTATCTGATTTCTCAACGAAAACGACAAC ACTTCCTCTTTCTCCAAAGGAACAACCAATCTCTAAGAGAAAAGTGCTTCCAATGGAACCCATTTCCAAGCCTCAATCTC CCATTTCAATCCTCAGATCAGCTCCAAGCTTCAGAATCTCCATGTTCAGAAGGGGCAAGCGAATGCAGAAAACAGAGGAA CCAACCAAAACAGAGTGTGAAACAATGAAGGACCAGAAGAAAGAAACCAGAGTCTTCGCGGTGAAACTGAACATGAACAT GGAAGATTTCAATTACTCTCCAGCTCTTAGCAGAGATAACAGCACGAGAAGCTTCGGGAGCAAGGTTCGGAGTTTTCAGA GCTCTGAAGAACAGAAACCAGAGCGGTTTTCGAAGGAGGTGTTGCAGAAGTATCTAAAGCTGATTAAGCCATTGTATGTG AAAGTCTCCAAGAGGTACACTGACAAGGCGAAGTTTACCGGGGAGGGTTTTGCTGCAGCTTCGCCGTCGTCGTCGCCGTC GGTGTCCTCTGTTTCTTCCAGGAGGGAGAAGCAGGGGAGTTTCCCGGTGGGGATGAGGGTGGTTTCTAAGCATTTGGGTA AGAGAAGGTCGGCCGGTACGGTGGTTGGAGTTAATTCTCCGGCGAACAGGAGTAATGATTCAGTGCAGCAGCATGATGAT GGGATTCAAAGCGCCATTCTTCACTGCAAGAGATCCTTCAACTCCAGAGGTATTTTTTGTTTGTTTGTTTTTTCACTATT ATGCTAATTTCTTGCAGCATTTTAATTAAGTTAAGAAGTGAAATGTTTAGTATAAATTTAACTCTAATTTTTGTTTTGTT TTTCAGAATGTTCAATTGCTCTTTCTGCTGATGGATCAATGAAATCTGCTAGAAACTCATTTGAGGATGAAGTGTGATGA TGATGGTGAAGAAAGAAGCTACATAGAGGATGAGAAAAAGAATTGAATAGAGAAGTGTTTTTTGTAATTTGTGTTCTTTT TGTAAAGGAAAAGGGAAATGAGAGGGAGTTGTTTAGGCATTGTGATGATTAGTGAGTCACAGTGTGATAGGCTCCCCTGC TCTGGTCAGTGACAGTGTACATTGATGGGCCATTATGAAAAGAATCAAGATTTTCCTCTGAATTTTGGATTTTCTTTGTG TCTTTGTGACTCTGATTTTGTACTTTGCATTTGATGAGGGAGGTTACTTTCACAAATCACAAGTATTTTTTTATTAGATA GCTATAATATGATTCAAAGCAACAACATTGTGTTGTGTGAGTAACTGAGTATTGATTGGACTTGCATCTGAAATCTCATT CCCAATTTTCATCATTTATAATGGAGAAAGTGTGTTGTTTGATAAATGCAAGAGAATGAACACACATTAACAAACTAGTT AAGTGCCAGATGAGGGGTTCAGAAATTGAGCAAGATTAACTAGTAATTTATTGAAGTTGATGTGTGTTGTAGCAGACAAA TTGAATCAAATTCTGTACTAAAAAGGAATTAAACTGAAAATCAGAGTCCAATCTCCAGCTCCAGCATGAAGAATAGTGAT GTCAGCTTTGAGTCCAGTGATGCCTATGGCAAATCCACTAAAGTGAACAATGGTGTAGAATTGATAG
CDS sequence (LotjaGi5g1v0295400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCTCTCAACTTCTTAAAATTCTGGCGTAGCGCCACCGTAACAACCACCACCACCTCCACCTCCACCTCCACCGT AGCTCCTCATCTTGTTGTCGAAACAGACAGTGAGTCCGACGAAGAAGACTCGTTCTTCGACTTGGAGCTCACGGTACGTG ATTACGACAACAAAGAAAACAACAACAACAACAAAAGTCTCTGTTCCAATGTATCTGATTTCTCAACGAAAACGACAACA CTTCCTCTTTCTCCAAAGGAACAACCAATCTCTAAGAGAAAAGTGCTTCCAATGGAACCCATTTCCAAGCCTCAATCTCC CATTTCAATCCTCAGATCAGCTCCAAGCTTCAGAATCTCCATGTTCAGAAGGGGCAAGCGAATGCAGAAAACAGAGGAAC CAACCAAAACAGAGTGTGAAACAATGAAGGACCAGAAGAAAGAAACCAGAGTCTTCGCGGTGAAACTGAACATGAACATG GAAGATTTCAATTACTCTCCAGCTCTTAGCAGAGATAACAGCACGAGAAGCTTCGGGAGCAAGGTTCGGAGTTTTCAGAG CTCTGAAGAACAGAAACCAGAGCGGTTTTCGAAGGAGGTGTTGCAGAAGTATCTAAAGCTGATTAAGCCATTGTATGTGA AAGTCTCCAAGAGGTACACTGACAAGGCGAAGTTTACCGGGGAGGGTTTTGCTGCAGCTTCGCCGTCGTCGTCGCCGTCG GTGTCCTCTGTTTCTTCCAGGAGGGAGAAGCAGGGGAGTTTCCCGGTGGGGATGAGGGTGGTTTCTAAGCATTTGGGTAA GAGAAGGTCGGCCGGTACGGTGGTTGGAGTTAATTCTCCGGCGAACAGGAGTAATGATTCAGTGCAGCAGCATGATGATG GGATTCAAAGCGCCATTCTTCACTGCAAGAGATCCTTCAACTCCAGAGAATGTTCAATTGCTCTTTCTGCTGATGGATCA ATGAAATCTGCTAGAAACTCATTTGAGGATGAAGTGTGA
Protein sequence (LotjaGi5g1v0295400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDALNFLKFWRSATVTTTTTSTSTSTVAPHLVVETDSESDEEDSFFDLELTVRDYDNKENNNNNKSLCSNVSDFSTKTTT LPLSPKEQPISKRKVLPMEPISKPQSPISILRSAPSFRISMFRRGKRMQKTEEPTKTECETMKDQKKETRVFAVKLNMNM EDFNYSPALSRDNSTRSFGSKVRSFQSSEEQKPERFSKEVLQKYLKLIKPLYVKVSKRYTDKAKFTGEGFAAASPSSSPS VSSVSSRREKQGSFPVGMRVVSKHLGKRRSAGTVVGVNSPANRSNDSVQQHDDGIQSAILHCKRSFNSRECSIALSADGS MKSARNSFEDEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 6.4E-105 | – | |
| PANTHER | 1 | 324 | 324 | 6.4E-105 | ||
| MobiDBLite | 229 | 253 | 25 | - | – | |
| MobiDBLite | 231 | 250 | 20 | - | – | |
| MobiDBLite | 269 | 291 | 23 | - | – | |
| MobiDBLite | 275 | 291 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
Expression pattern of LotjaGi5g1v0295400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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