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LotjaGi5g1v0316300.1

Overview

Field Value
Gene ID LotjaGi5g1v0316300
Transcript ID LotjaGi5g1v0316300.1
Lotus japonicus genome version Gifu v1.2
Description Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G47480.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q5NUF4|HIDM_GLYEC 2-hydroxyisoflavanone dehydratase; TrEMBL-Plants: tr|I1LE69|I1LE69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:63416209..63417547) extracted from Lotus japonicus Gifu genome v1.2.

CTATATAGATAAAATTGTACAATATTATTCATGTGGTGTGTTACCAATCATTTTCTAATTGCGTCTTGCACAGATAGATA ACCTAACCCTCTATAAAGTACTGTAAACTTAACGAACGTCTTCCAACAACTGAAGCTTACTGCTTCCACCTTGAGTTGAA TTCTGAATTCTAATGGCTTCCACTAACAGTACCCAAGGAGAATACGTCCCAGAGCTCAGCTACTGGATCCGCTTCCACAG CGACGGCACGGCGGAACGCCTCAGAAACACACCATTCGCGCCACCGTCACTCAACGACCCCAAAACTGGAGTCTCCTCCA AAGATATAATCATCTCACATAACCCCCCAATCTCTGCACGCATTTACCTTCCAAACCTCACCACCAACTCCAGCAAACTT CCCATCTTAGTCTATTATCACGGCGGTGGATTCTTCTTTGAATCTGCTTTCTCTGAAATCTTCCATAACCATCTCACCAA GCTGGTTTCTACAGCAAACGTCTTGGTCGTTTCTGTAGAATACAGGCTTGCTCCGGAGACTCCTCTCCCTGCAGCATACG ATGATTCCTGGGCTGCTCTCAAATGGGTCGCTTCCCATTCCACCAAAGACACTGTAGCAGAGCCATGGTTGACTGAGCAT GGTGACTTCAACAGAGTTTTCATCGGAGGTGACAGTGCAGGCGGCAACATTGTGCATAACATCATTTCCACTCATGGTTC TGAGGATTTACCTGGTAATGTTAAAATCTATGGTGCTGTTTTGATCCAGCCTTACTTCTATGGTTCAGAGCCTGCTGGAT CAGAATCTGCTACAGGGCGCGAAGCGAATTTCTATAATAGTGTTTGGAAGTTGGTGTACCCATCTGCACCTGGTGAAATT GATAGTCCTTTCATGAACCCTTTGGCTCCAGGTGCACCTAGCTTGGATAAACTTGCATGTTCTCGAATGATTGTGTGTGT TGCTGAGAAAGATGGGATGAGGAACAAAGTGGTTTTGTATTGTGAGGCAGTGAAGAAGAGTGGGTGGAAGGGGAAGATTG AACTCTTTGAAGAGAAGGAAGAAGATCATGCGTATCAATTGCTCAAACCAGAGTCTGAGGCTGCCATCAAAATGATCAAT CACGTTGCTTCTTTTCTAGTCCATGAGTATTAATCATCAGAATCAATCTGGTTCTGATTTCTGGTCATCTGGTGTACTGT ATTTTTTGTCTTTTTTTAATTTTCTTGTTGCTTTGGAACAAATAATATTCGCTTTTATGCGAGGTTGTTCACTATCTCAG TCAATAATGCTCTTCTCAAATTATTAAAAAACCTGACTGCCGAATCAAATCAGTTTGTC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0316300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCCACTAACAGTACCCAAGGAGAATACGTCCCAGAGCTCAGCTACTGGATCCGCTTCCACAGCGACGGCACGGC GGAACGCCTCAGAAACACACCATTCGCGCCACCGTCACTCAACGACCCCAAAACTGGAGTCTCCTCCAAAGATATAATCA TCTCACATAACCCCCCAATCTCTGCACGCATTTACCTTCCAAACCTCACCACCAACTCCAGCAAACTTCCCATCTTAGTC TATTATCACGGCGGTGGATTCTTCTTTGAATCTGCTTTCTCTGAAATCTTCCATAACCATCTCACCAAGCTGGTTTCTAC AGCAAACGTCTTGGTCGTTTCTGTAGAATACAGGCTTGCTCCGGAGACTCCTCTCCCTGCAGCATACGATGATTCCTGGG CTGCTCTCAAATGGGTCGCTTCCCATTCCACCAAAGACACTGTAGCAGAGCCATGGTTGACTGAGCATGGTGACTTCAAC AGAGTTTTCATCGGAGGTGACAGTGCAGGCGGCAACATTGTGCATAACATCATTTCCACTCATGGTTCTGAGGATTTACC TGGTAATGTTAAAATCTATGGTGCTGTTTTGATCCAGCCTTACTTCTATGGTTCAGAGCCTGCTGGATCAGAATCTGCTA CAGGGCGCGAAGCGAATTTCTATAATAGTGTTTGGAAGTTGGTGTACCCATCTGCACCTGGTGAAATTGATAGTCCTTTC ATGAACCCTTTGGCTCCAGGTGCACCTAGCTTGGATAAACTTGCATGTTCTCGAATGATTGTGTGTGTTGCTGAGAAAGA TGGGATGAGGAACAAAGTGGTTTTGTATTGTGAGGCAGTGAAGAAGAGTGGGTGGAAGGGGAAGATTGAACTCTTTGAAG AGAAGGAAGAAGATCATGCGTATCAATTGCTCAAACCAGAGTCTGAGGCTGCCATCAAAATGATCAATCACGTTGCTTCT TTTCTAGTCCATGAGTATTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0316300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASTNSTQGEYVPELSYWIRFHSDGTAERLRNTPFAPPSLNDPKTGVSSKDIIISHNPPISARIYLPNLTTNSSKLPILV YYHGGGFFFESAFSEIFHNHLTKLVSTANVLVVSVEYRLAPETPLPAAYDDSWAALKWVASHSTKDTVAEPWLTEHGDFN RVFIGGDSAGGNIVHNIISTHGSEDLPGNVKIYGAVLIQPYFYGSEPAGSESATGREANFYNSVWKLVYPSAPGEIDSPF MNPLAPGAPSLDKLACSRMIVCVAEKDGMRNKVVLYCEAVKKSGWKGKIELFEEKEEDHAYQLLKPESEAAIKMINHVAS FLVHEY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23024:SF381
8 323 316 7.5E-119 –
PANTHER
PTHR23024
8 323 316 7.5E-119 –
SUPERFAMILY
SSF53474
11 322 312 4.63E-52
IPR029058
Gene3D
G3DSA:3.40.50.1820
16 325 310 5.8E-69
IPR029058
Pfam
PF07859
79 302 224 1.4E-43
IPR013094

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0316300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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